KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:49 2014 Check: 00 .. Name: bmy_06418T0/1-279 Len: 450 Check: 4321 Weight: 1.00 Name: BACU002189/1-305 Len: 450 Check: 5017 Weight: 1.00 Name: ENSTTRP00000013803/1-414 Len: 450 Check: 9266 Weight: 1.00 Name: ENSP00000324175/1-415 Len: 450 Check: 542 Weight: 1.00 Name: ENSBTAP00000015429/1-430 Len: 450 Check: 1072 Weight: 1.00 // 1 50 bmy_06418T0/1-279 MTLAASSQRS QIIRSKFRSV LQLRIHRRYQ DTSLSGSFAA SPFSDPDPWI BACU002189/1-305 MTLAASSQRS QIIRSKFRSV LQLRIHRRYQ DTSLSGSFAA SAFSDPDPWI ENSTTRP00000013803/1-414 MTLAASSQRS QIIRSKFRSV LQLRIHRRYQ D--------- -TISDPDPWI ENSP00000324175/1-415 MTLAASSQRS QIIRSKFRSV LQLRIHRRNQ E--------- -QISDPDPWI ENSBTAP00000015429/1-430 MTLAASSQRS QIIRSKFRSV LQLRIHRRYQ DPTLSGSFTA SPVLDPDPWI 51 100 bmy_06418T0/1-279 SAADPALAPA PASPSSPAPF LFSPGVLLPE PKHYP-WRSL KKESPKISQH BACU002189/1-305 SAADPALAPA PASPLSPAPF LFSPGVLLPE PKHYP-WRSL K--------- ENSTTRP00000013803/1-414 SATDP--ALA PASPSSPAPF LFSPGVLLPE PKHYP-WRSL KKXXXXXXXX ENSP00000324175/1-415 SASDP--PLA PALPSGTAPF LFSPGVLLPE PEYCPPWRSP KKESPKISQR ENSBTAP00000015429/1-430 SAADPALALA PASPLGPAPF LFNPEVLLPE PKPC--W-SL KKESPKTSQH 101 150 bmy_06418T0/1-279 WREPKPKEHL TYHQYMPPEP RQGSRADPQA EGSALGPPGP PPWEWTNSQQ BACU002189/1-305 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013803/1-414 XXXXXXXXXX XXXXXXXXXX XXXXXADPQA EGSALGPPGP PPWEWTNSQQ ENSP00000324175/1-415 WRESKPRGNL TYHQYMPPEP RQGSRADPQA EGSALGPPGP SLWEGTDSQQ ENSBTAP00000015429/1-430 WREPKPKGNL TYHQYIPPEP RQGYRADPQV EGSPLDPPGP PLWEGTTSQQ 151 200 bmy_06418T0/1-279 PPPRMKPSPL TRSPPGVPSP SPSPHKLELQ TLKLEELTVS ELRQQLRLRG BACU002189/1-305 ---------- ---------- -----KLELQ TLKLEELTVS ELRQQLRLRG ENSTTRP00000013803/1-414 PPPRMKLSPL TSSPPGVPSP SPSPHKLELQ TLKLEELTVS ELRQQLRLRG ENSP00000324175/1-415 PHPRMKPSPL TPCPPGVPSP SPPPHKLELQ TLKLEELTVS ELRQQLRLRG ENSBTAP00000015429/1-430 PPPRMKPTPL TPSPPGVPSP SPLPHKLELQ TLKLEELTVS ELRQQLRLRG 201 250 bmy_06418T0/1-279 LPVSGTKSML LERMRGGAPP RERPKPRRED GPA------- ------GAP- BACU002189/1-305 LPVSGTKSML LERMRGGAPP RERPKPRRED VQAESNISLA APSTCRGNPC ENSTTRP00000013803/1-414 LPVSGTKSML LERMRGGAPP RERPKPRREE GPA------- ------GAP- ENSP00000324175/1-415 LPVSGTKSML LERMRGGAPP RERPKPRRED SPA------- ------GAP- ENSBTAP00000015429/1-430 LPVSGTKSML LERMRGGAPP RERPKARRED SAA------- ------GAP- 251 300 bmy_06418T0/1-279 ---WPRFRRK ALGAAGRLAS VRAGLRAWTN EEKTKRDGAG SREKNSQ--- BACU002189/1-305 DGSGSCSGSG CIDGSGSSSS ADPFLSTSLD SPDTGGGAAG SDPQSA---- ENSTTRP00000013803/1-414 ---WPRFRRK ALGAAGRPGS LKPSQTSHSL PPPRAAETLV TAPAPAPAP- ENSP00000324175/1-415 ---WPRLKPK ALAAARRQGS VKPSAASHRP PLPRAADTPG TAPAPTPTP- ENSBTAP00000015429/1-430 ---WPRFRPK ALGAARSACS FKLSPTSHSP PPPRAVETLV TASASAPVPV 301 350 bmy_06418T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU002189/1-305 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013803/1-414 -----APAPA PVPIPSSAAA STALTLEEEL QEAIRRAQLL PNRGISDILE ENSP00000324175/1-415 -----APAAA PALTPSSGPG SAALTLEEEL QEAIRRAQLL PNRGIDDILE ENSBTAP00000015429/1-430 ATTAQAPTPA PVPVPSSAPA STALTLEEEL QEAIRRAQLL PNRGIDDILE 351 400 bmy_06418T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU002189/1-305 ------DMLP PIPLDFPGSF DLLSPSPDSE GLSSVFSSSL PSPTNSPSPS ENSTTRP00000013803/1-414 DQVEPEDMLP PIPLDFPGSF DLLSPSPDSE GLSSVFSSSL PSPTNSPSPS ENSP00000324175/1-415 DQVEPDDPLP PIPLDFPGSF DVLSPSPDSE GLSSVFSSSL PSPTNSSSPS ENSBTAP00000015429/1-430 DQVEPEDPLP AIPLDFPGSF DMLSPSPDSE GLSSVFSSSL PSPTNSPSPS 401 450 bmy_06418T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU002189/1-305 PRGPTDSLDW LEALSGGPPL GCGPPAPSIF SADLSDSSGT RLWDLLEDPW ENSTTRP00000013803/1-414 PRGPTDSLDW LEALSGGPPL GCGPPAPSIF SADLSDSSGT RLWDLLEDPW ENSP00000324175/1-415 PRDPTDSLDW LEALSGGPPL GSGPPPPSIF SADLSDSSSS RLWDLLEDPW ENSBTAP00000015429/1-430 PRGPTDFLDW LEALSGGPSL GCGPPAPSIF SADLSDSSGT RLWDLLEDPW