KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:55 2014 Check: 00 .. Name: bmy_15020T0/1-330 Len: 420 Check: 7458 Weight: 1.00 Name: ENSP00000323036/1-418 Len: 420 Check: 7511 Weight: 1.00 Name: ENSBTAP00000015451/1-387 Len: 420 Check: 4745 Weight: 1.00 Name: BACU008814/1-385 Len: 420 Check: 5179 Weight: 1.00 Name: ENSTTRP00000008146/1-413 Len: 420 Check: 6349 Weight: 1.00 // 1 50 bmy_15020T0/1-330 ---------- ---------- SIYFQ----- ---------- --VFRHGDRS ENSP00000323036/1-418 MRAAPLLLAR AASLSLGFLF LLFFW--LDR SVLAKELKFV TLVFRHGDRS ENSBTAP00000015451/1-387 MRNAALLMTR ATSLRLSLLL LLSFLPDLDG GVRAKELRFV TLVFRHGDRS BACU008814/1-385 MRAATLLVAK AASLRLSLLL LLSFW--LDR GVGAKELRFV TLVFRHGDRS ENSTTRP00000008146/1-413 MRAATLLVAR AASLRLS--L LLSFW--LDR GVGAKELRFV TLVFRHGDRS 51 100 bmy_15020T0/1-330 PIETFPNDPI KESSWPQGFG QLTQLGMEQH YELGQYIRKR YEKFLNKSYR ENSP00000323036/1-418 PIDTFPTDPI KESSWPQGFG QLTQLGMEQH YELGEYIRKR YRKFLNESYK ENSBTAP00000015451/1-387 PIETFPNDPI KESSWPQGFG QLTQLGMAQH YELGQYIRKR YENFLNESYK BACU008814/1-385 PIETFPNDPI KESSWPQGFG QLTQLGMEQH YELGQYIRKR YEKFLNKSYR ENSTTRP00000008146/1-413 PIETFPNDPI KESSWPQGFG QLTQLGMEQH YELGQYIRKR YEKFLNKSYK 101 150 bmy_15020T0/1-330 HEQVYVRSTD IDRTLMSAMT SLAALFPPEG ISVWNPSLPW QPIPVHTVPV ENSP00000323036/1-418 HEQVYIRSTD VDRTLMSAMT NLAALFPPEG VSIWNPILLW QPIPVHTVPL ENSBTAP00000015451/1-387 REQVHVRSTD IDRTLMSAMT NLAALFPPEG ISIWNPSLPW QPIPVHTVPV BACU008814/1-385 HEQVYVRSTD IDRTLMSAMT NLAALFSPEG ISVWNPSLPW QPIPVHTVPI ENSTTRP00000008146/1-413 HEQVFVRSTD IDRALMSAMT SLAALFPPEG ISVWNPSLPW QPIPVHTVPV 151 200 bmy_15020T0/1-330 SEDRLLYLPF RNCSRFQELE RKTLKSEEFQ KRLHPYKDTI T-----RTFL ENSP00000323036/1-418 SEDQLLYLPF RNCPRFQELE SETLKSEEFQ KRLHPYKDFI ATLGKLSGLH ENSBTAP00000015451/1-387 SEDQLLYLPF RNCPRFQELQ SETLISEEFQ KRLQPYKDFI EVLPKLTGYH BACU008814/1-385 SEDRLLYLPF RNCSRFQELE RKTLKSEEFQ KRLHPYKDFI EILPKFTGYH ENSTTRP00000008146/1-413 SEDRLLYLPF RNCSRFQELE RKTLKSEEFQ KRLHPYKDFI EILPKFTGYH 201 250 bmy_15020T0/1-330 E---FGVKST TLYFVRCPGQ RN----PLSH EECNSAIEPQ KTHYVFCKQE ENSP00000323036/1-418 GQDLFGIWSK VYDPLYCESV HNFTLPSWAT EDTMTKLREL SELSLLSLYG ENSBTAP00000015451/1-387 DQDLLGIWSK VYDPLFCEGV HNFTLPSWAT EDTMTKLKEI SELSLLSLYG BACU008814/1-385 NQDLFGIWSK VYDPLFCERV HNFTLPSWAT EDSMTKLKKI SELSLLSVYG ENSTTRP00000008146/1-413 DQDLFGIWSK VYDPLFCEGV HNFTLPSWAT EDTMTKLKEI SELSLLSLYG 251 300 bmy_15020T0/1-330 QERESDRR-- -----ITRKA ECTRLGDELE CGRRAMVWK- HDTTVSALQM ENSP00000323036/1-418 IHKQKEKSRL QGGVLVNEIL NHMKRATQIP SYKKLIMYSA HDTTVSGLQM ENSBTAP00000015451/1-387 IHKQKEKSRL QGGVLINEIL NHMKSATQPS NRRKLIMYSA HDTTVSGLQM BACU008814/1-385 IHKQKEKSRL QGGVLVKEIL YHMKSATQPL NHRKLIMYSA HDTTVSALQM ENSTTRP00000008146/1-413 IHRQKEKSRL QGGVLVKEIL YHMKSATQPL NHRKLIIYSA HDTTVSALQM 301 350 bmy_15020T0/1-330 ALDVYNGILP PHASCHLMEL YFEKGEYFIE MYYRNETQHE PHPLTLPGCT ENSP00000323036/1-418 ALDVYNGLLP PYASCHLTEL YFEKGEYFVE MYYRNETQHE PYPLMLPGCS ENSBTAP00000015451/1-387 ALDVYNGILP PYASCHMMEL YFQDGEYFVE MYYRNETRYE PHPLTLPGCT BACU008814/1-385 ALDVYNGILP PHASCHLMEL YFEKGEYFIE MYYRNETQHE PHSLTLPGCT ENSTTRP00000008146/1-413 ALDVYNGILP PYASCHLTEL YFEKGEYFIE MYYRNETQHE PHPLTLPGCT 351 400 bmy_15020T0/1-330 PSCPLTKFAE LVAPVIPQDW STECAMSN-H EGTEDAMD-- ---------- ENSP00000323036/1-418 PSCPLERFAE LVGPVIPQDW STECMTTNSH QVLKVIFAVA FCLISAVLMV ENSBTAP00000015451/1-387 PSCPLAKFVE LVAPVISQDW SMECAIRN-H KGTEDIIN-- ---------- BACU008814/1-385 PSCPLTKFAE LVAPVIPQDW STECAMNN-H EGTEDAMD-- ---------- ENSTTRP00000008146/1-413 PSCPLTKFAE LVAPVISQDW STECAMSN-H EVVRIILAIV FCLVSGVLIV 401 450 bmy_15020T0/1-330 ---------- ---------- ENSP00000323036/1-418 LLFIHIRRGL CWQRESYGNI ENSBTAP00000015451/1-387 ---------- ---------- BACU008814/1-385 ---------- ---------- ENSTTRP00000008146/1-413 LLFILIRHRP C--QRDCGNI