KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:55:56 2014 Check: 00 ..
Name: ENSP00000435421/1-998 Len: 1012 Check: 9537 Weight: 1.00
Name: ENSBTAP00000015454/1-984 Len: 1012 Check: 5722 Weight: 1.00
Name: bmy_12304T0/1-997 Len: 1012 Check: 7094 Weight: 1.00
Name: ENSTTRP00000009672/1-966 Len: 1012 Check: 8108 Weight: 1.00
//
1 50
ENSP00000435421/1-998 MNRRRKFLLA SVLALQNSSF IYPSCQKCFS RIILVSKRSN CPKCGSTGES
ENSBTAP00000015454/1-984 MNRRRKFLLA SVLALQNSSF IYPSCQKCFS RIILVSKRSN CPKCGSTGEA
bmy_12304T0/1-997 MNRRRKFLLA SVLALQNSSF IYPSCQKCFS RIILVSKRSN CPKCGSTGEA
ENSTTRP00000009672/1-966 ---------- ---------- -YPSCQKCFS RILLVSKRSN CPKCGSTGEA
51 100
ENSP00000435421/1-998 GNANYRYKLS LKVAESNKLF VITVFGSCLD TFFGLTATGL HRYIQDPNKI
ENSBTAP00000015454/1-984 ENAIYRYKLS LKVAESNKLF GVTVFGSCLD AFFGLTATGL HRYIQDPSEI
bmy_12304T0/1-997 ENATYRYKLA LKVAESNKLF GITVFGSCLD AFFGLTATGL HRYIQDPNEI
ENSTTRP00000009672/1-966 ENASYRYKLT LKVAESNKLF GITVFGSCLD AFFGLTATGL HRYIQDRNEI
101 150
ENSP00000435421/1-998 PETLDNDTTQ NLLTKAVETC FVGQSFIFGV TNFENQPGQG SDASNFLQQC
ENSBTAP00000015454/1-984 PETLGSDTTQ NLLTKAVETC FVGQNFVFGV TNFENQHGKG SGSSNFSEQC
bmy_12304T0/1-997 PETLDSDETQ NLLTKAVETC FVGQSFIFGV TNFESQHGQG SGSSNLLEQY
ENSTTRP00000009672/1-966 PETLDSDAAQ TLLTKAVETC FVGQSFIFGV TNFESQHRQG SGSSNLLEQC
151 200
ENSP00000435421/1-998 SDHKRKAKAL VACQIVLPDP GIAGFTVIDY FHQLLQTFNF RKLQCDSQAP
ENSBTAP00000015454/1-984 SDRKRVVKAL VACQIIPPDP NVVGFTVIDY FRRLLKLSAV RKLRCGSQTP
bmy_12304T0/1-997 SDHKRKVKAL VACQILLPDP GVVGFTVIDY FHQLLQLSDI RKLRCGSQAP
ENSTTRP00000009672/1-966 SDHKREVKAL VACQIVLPDP GVVGFTVIDY FHRLLQLSDI RKLRCGSQAP
201 250
ENSP00000435421/1-998 NNHLLALDHS NSDLSSIYTS DSTSDFFKSC SKDTFSKFWQ PSLEFTCIVS
ENSBTAP00000015454/1-984 NSHLLALESS NSDLSSLCGP DSSS-CFEPH DKDYFPGFWQ LSLDLTSVVS
bmy_12304T0/1-997 NSHLLALENS NSDVSSICGP DSSSCCFESH GRDDFSGFWQ LSLELTSIVS
ENSTTRP00000009672/1-966 NSHLLALENS NSDVSSICGP DSSSCCFESH GSDDFSGFWQ LSLELTSVVS
251 300
ENSP00000435421/1-998 QLTDNDDFSA SEQSKAFGTL QQNRKSISIA EATGSSSCHD PIQDSWSLVS
ENSBTAP00000015454/1-984 QLTD-DGFSA LEQSKAIGTL HQNRKCISSA EATGSNSCLD TIQGSWSLVS
bmy_12304T0/1-997 QLTDDDDFSA SEQSKAIDTP HQNRMCISSA EATGSNSCHD TIQGLWSPIS
ENSTTRP00000009672/1-966 QLTDDDDFSA SEQSEAIDTL HQNRMCISSA EATGSNSCRD TIQGLWSPVS
301 350
ENSP00000435421/1-998 YMDKKSTAEK LGKELGLQAK ELSAVHSSHH EIGVNDSNLF SLEMREPLES
ENSBTAP00000015454/1-984 HMDKKSSALK LDEEPGLQAN QPSAVHSNHH EIGVPDSNLF PIKVQERFEP
bmy_12304T0/1-997 YMDKKSAAQK LGEELGLQAN QPSAVHSNHH DIGVPGSNLF PLKVQEPLEP
ENSTTRP00000009672/1-966 YMDQNSAAQK LGEELGLQAD QPSAVHSNHH EIGVPGSNLF PLKVQEPLEP
351 400
ENSP00000435421/1-998 SNTKSFHSAV EIKN-RSQHE LPCFQHHGID TPTSLQKRSA CCPPSLLRLE
ENSBTAP00000015454/1-984 RNTKSFHSAV EVT--YSQHE ITCHQNQEVD TLPSFQQRCM CYPSSSLRLE
bmy_12304T0/1-997 SNTKSFHSAV EVKNIYSQHE LTCHQYHDVD TPASFQERSM CCTPSSLRLE
ENSTTRP00000009672/1-966 SNTISFHSAV EVKNIYSQRE LTCHQYHDVD TPASFQERSV CCPPSSLRLE
401 450
ENSP00000435421/1-998 ETASSSQDGD PQIWDDLPFS ESLNKFLAVL ESEIAVTQAD VSSRKHHVDN
ENSBTAP00000015454/1-984 EIVSGSQDCD LEIWDDLPLS ESLNKFLAAI ESEIAVNQTD ASSRKCRLDN
bmy_12304T0/1-997 EIAGGSQDCD PEIWADLPLS ESLNKFLAAI ESEIAITQTD GSSRKCHLDN
ENSTTRP00000009672/1-966 EIAGGSQDCD PEIWADLPLS ESLNKFLAAI ESEIAITQTD GSSRKCXXXX
451 500
ENSP00000435421/1-998 DIDKFHADHS RLSVTPQRTT GALHTPPIAL RSSQVIVKAN CSKDDFLFNC
ENSBTAP00000015454/1-984 DISKLHVDHS RLSLTPQRTP GALHTPRIAL RSPPATVKAN SSRENFLSNH
bmy_12304T0/1-997 DISKLHADHS RFSVTPQRTX RSLHTPPIGL RSPQATVKAN SSKNNFLSNC
ENSTTRP00000009672/1-966 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXQATVKAN SSKNNFLFNC
501 550
ENSP00000435421/1-998 KGNLSPSVEK ESQPDNKVEA VSVNHNGRDM SEYFLPNPYL SALSSSSKDL
ENSBTAP00000015454/1-984 EANPSPSIHK ESQPENRAEA LSFSGNKRDI SEHSLPNVHL SALFPSSKGS
bmy_12304T0/1-997 EANPSPSVHK ESQSENTAET ISISSSERGI SENLLPNVYL SALFPSSKGS
ENSTTRP00000009672/1-966 EANPSPSIHK ESQPENTAET ISVSSSERGI SENLLPNVYL SVLFPSSKGS
551 600
ENSP00000435421/1-998 ETIVTLKKTI RISPHR---- ------ESDH SSLNNKYLNG CGEISVSEMN
ENSBTAP00000015454/1-984 GTTVALKST- RILPSS---- ------EADH SCLSSKYNNG CGEKSLSEMS
bmy_12304T0/1-997 GTTVTLKST- RIPPHEAEIS LKHDTSETDH SCLNSKYFNG RGEKSLSEMS
ENSTTRP00000009672/1-966 GTTVTLKST- RILPHE---- ------ETDH SCLNSKYFNG CAEKSLSERS
601 650
ENSP00000435421/1-998 EKLTTLCYRK YNDVSDLCKL ENKQYCRWSK NQDDSFTICR KLTYPLETLC
ENSBTAP00000015454/1-984 EKLTTLHSRR YNVVSKFPSL ENKQYCRRPK NQGNSLTICR KLTYPLEALH
bmy_12304T0/1-997 EKLTTLSSRR YNDVSNLHNL ENKQYCRRPK NQGDSLTICR KLTYPLEALC
ENSTTRP00000009672/1-966 EKLTTLSSRR YNDVSNLHNL ENKQYCRRPK NQGDSLTICR KLTYPLEALC
651 700
ENSP00000435421/1-998 NSPNRSTNTL KEMPWGHINN NVTQSYSIGY EGSYDASADL FDDIAKEMDI
ENSBTAP00000015454/1-984 STPNRSMNIL REMLYEHTGN NPTQNCSTGH EGSYNASVDL FDDSPKEMDI
bmy_12304T0/1-997 SMPNRSTNTL KEMSYEHTGN NLTPNCSTGH EGCYNASADL FDDSPKEMDM
ENSTTRP00000009672/1-966 SMPDRSTNAL KEMSYEHTGN NLTANCSAGH EGGYNASADL FDDSPKEMDM
701 750
ENSP00000435421/1-998 ATEITKKSQD ILLKWGTSLA ESHPSESDFS LRSLSEDFIQ PSQKLSLQSL
ENSBTAP00000015454/1-984 VTEMTKRSQN IFLQWGKSLA ESHHTESDFS LRSLSENSSQ SSQKLSLQNT
bmy_12304T0/1-997 ATEMTKKSQD ILLQWGKSLA ESHHTESDFS LRSLSENSSQ SSQKLSLQNT
ENSTTRP00000009672/1-966 ATEMTKKSQD ILLQWGKSSA ESHPTESDFS LRSFSENSSQ SSQKLSLQNT
751 800
ENSP00000435421/1-998 SDSRHSRTCS PTPHFQSDSE YNFENSQDFV PCSQSTPISG FHQTRIHGIN
ENSBTAP00000015454/1-984 SASLYPRTCP SPPHFQSDSE YDIEYSQDFV PCSQSTPVTG FHQSRIHGMK
bmy_12304T0/1-997 SASLYPKTCP SPPHFQSDSE YDFEDSQDFV PCSQSTPVIG FHQTRIHGMT
ENSTTRP00000009672/1-966 SASLYLKTCP SPPHFQSDSE YDFEDSQDFV PCSQSTPVIG FHQTRIHGMT
801 850
ENSP00000435421/1-998 RAFKK-PVFY SDLDGNYEKI RIFPENDKQQ ASPSCPKNIK TPSQKIRSPI
ENSBTAP00000015454/1-984 GAFQKLPAFY LDLDANYKKT RISSANDALQ ATPVCPKNIK TPGQKSRSPT
bmy_12304T0/1-997 GAFKKLPAFY LDLDANYKKT RISSVNDAQQ ATPSCPKNIK TPSQKSRSPT
ENSTTRP00000009672/1-966 GAFKKLPAFY LGLDANYKKT RISTVNDAQQ TTPSCPKNIK TTSQKSRSPT
851 900
ENSP00000435421/1-998 VSGVSQPDVF NHYPFAECHE TDSDEWVPPT TQKIFPSDML GFQGIGLGKC
ENSBTAP00000015454/1-984 VSG-TPSEVS NNHPVTECLE TDADEWVPPT TQKVFPSDML GFQATGLRKC
bmy_12304T0/1-997 VSSITQPEIS NNCPVAKYLE TDVDEWVPPT TQKVFPSEML GFQAVGLRKC
ENSTTRP00000009672/1-966 ISSITQPEIS NNCPVAKYLE TDVDEWVPPT TQKVFPSEML GFQAMGLRKC
901 950
ENSP00000435421/1-998 LAAYHFPDQQ ELPRKKLKHI RQGTNKGLIK KK--LKNMLA AVVTKKKTHK
ENSBTAP00000015454/1-984 HAAYNSPDQN ELPRKKLKYG KQRTGKCLIK KELNLKTMLT AAVIKQKTPD
bmy_12304T0/1-997 PAAYNSPDQK ELPRKKLKYV KQRTDKCLIK KELNLKNMLT AA--EPKTPD
ENSTTRP00000009672/1-966 PAAYNSPDQK ELPRKKLKYV KQRTDKCLIK KKLNLKNMLT AA--EQKSPD
951 1000
ENSP00000435421/1-998 YNCKSSGWIS KCPDIQVLAA PQLHPILGPD SCSEVKCCLP FSEKGPPSVC
ENSBTAP00000015454/1-984 YNNIRSGWIS K--------- ---ESVLGRG SCAEVKCCLP FSENWSPSAP
bmy_12304T0/1-997 YNSTGLGWIF K--------- ---ESVLGLG SRSKVKCCLA VSEDWSPSVP
ENSTTRP00000009672/1-966 YNSTGLGWIF K--------- ---ESVLGLA SHSEVKCCLP FSEGWSPSVP
1001 1050
ENSP00000435421/1-998 ETRSAWSPEL FS
ENSBTAP00000015454/1-984 ESKSAWSPEL FS
bmy_12304T0/1-997 ETKSAWSPEL FS
ENSTTRP00000009672/1-966 ETKSAWSPEL FS