KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:58 2014 Check: 00 .. Name: ENSTTRP00000009438/1-191 Len: 240 Check: 6382 Weight: 1.00 Name: ENSBTAP00000015465/1-237 Len: 240 Check: 5601 Weight: 1.00 Name: ENSP00000291552/1-240 Len: 240 Check: 6342 Weight: 1.00 Name: bmy_14089T0/1-230 Len: 240 Check: 3447 Weight: 1.00 Name: BACU004386/1-223 Len: 240 Check: 5042 Weight: 1.00 // 1 50 ENSTTRP00000009438/1-191 MAEYMSSIFG TEKDKVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN ENSBTAP00000015465/1-237 MAEYLASIFG TEKDKVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN ENSP00000291552/1-240 MAEYLASIFG TEKDKVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN bmy_14089T0/1-230 ------LIFP Y---RVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN BACU004386/1-223 ---------- ----RVNCSF YFKIGACRHG DRCSRLHNKP TFSQTIALLN 51 100 ENSTTRP00000009438/1-191 IYRNPQNSSQ SADGLRCAVS DVEMQEHYDE FFEEVXXXXX XXXXXXXXXX ENSBTAP00000015465/1-237 IYRNPQNSSQ SADGLRCAVS DVEMQEHYDE FFEEVFTEME EKYGEVEEMN ENSP00000291552/1-240 IYRNPQNSSQ SADGLRCAVS DVEMQEHYDE FFEEVFTEME EKYGEVEEMN bmy_14089T0/1-230 IYRNPQNSSQ SADGLRCAVS DVEMQEHYDE FFEEVFTEME EKYGEVEEMN BACU004386/1-223 IYRNPQNSSQ SADGLRCAVS DVEMQEHYDE FFEEVFTEME EKYGEVEEMN 101 150 ENSTTRP00000009438/1-191 XXXXXXXXXX XXXXXXFRRE EDAEKAVIDL NNRWFNGQPI HAELSPVTDF ENSBTAP00000015465/1-237 VCDNLGDHLV GNVYVKFRRE EDAEKAVIDL NNRWFNGQPI HAELSPVTDF ENSP00000291552/1-240 VCDNLGDHLV GNVYVKFRRE EDAEKAVIDL NNRWFNGQPI HAELSPVTDF bmy_14089T0/1-230 VCDNLGDHLV GNVYVKFRRE EDAEKAVIDL NNRWFNGQPI HAELSPVTDF BACU004386/1-223 VCDNLGDHLV GNVYVKFRRE EDAEKAVIDL NNRWFNGQPI HAELSPVTDF 151 200 ENSTTRP00000009438/1-191 REACCRQYEM GECTRGGFCN FMHLKPISRE LRRELYGRRR K--------- ENSBTAP00000015465/1-237 REACCRQYEM GECTRGGFCN FMHLKPISRE LRRELYGRRR KKHRSRSRSR ENSP00000291552/1-240 REACCRQYEM GECTRGGFCN FMHLKPISRE LRRELYGRRR KKHRSRSRSR bmy_14089T0/1-230 REACCRQYEM GECTRGGFCN FMHLKPISRE LRRELYGRRR KKHRSRSRSR BACU004386/1-223 REACCRQYEM GECTRGGFCN FMHLKPISRE LRRELYGRRR KKHRSRSRSR 201 250 ENSTTRP00000009438/1-191 ---------- ---------- ---------- ---------- ENSBTAP00000015465/1-237 ERRSRSRDRG R---GGGGGG GGGRERDRRR SRDRERSGRF ENSP00000291552/1-240 ERRSRSRDRG RGGGGGGGGG GGGRERDRRR SRDRERSGRF bmy_14089T0/1-230 ERRSRSRDRG R-GGGGGGGG GGGRERDRRR SRDRERSGRF BACU004386/1-223 ERRSRSRDRG R---GGGGGG GGGRERDRRR SRDRERSGRF