KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:58 2014 Check: 00 .. Name: ENSP00000335261/1-421 Len: 421 Check: 9166 Weight: 1.00 Name: ENSBTAP00000015469/1-301 Len: 421 Check: 4750 Weight: 1.00 Name: ENSTTRP00000007954/1-421 Len: 421 Check: 1287 Weight: 1.00 Name: BACU010877/1-362 Len: 421 Check: 535 Weight: 1.00 Name: bmy_20435T0/1-264 Len: 421 Check: 9463 Weight: 1.00 // 1 50 ENSP00000335261/1-421 MWYHRLSHLH SRLQDLLKGG VIYPALPQPN FKSLLPLAVH WHHTASKSLT ENSBTAP00000015469/1-301 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007954/1-421 MWCRRLSHLQ SRLQDLLRGR VTCWALQQPS FKSLFPLAIH WHHTASKSLN BACU010877/1-362 MWCRRLSHLQ SRLQDLLRGR VTCWALQQPN FKSLFPLAIH WHHTASKSLN bmy_20435T0/1-264 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000335261/1-421 CAWQQHEDHF ELKYANTVMR FDYVWLRDHC RSASCYNSKT HQRSLDTASV ENSBTAP00000015469/1-301 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007954/1-421 CVWQQHEDHF ELQYANTVMR FDYVWLRDHC LSASCYNSKT HQRSLDTASV BACU010877/1-362 CVWQQHEDHF G--------- ---------- ---------- ---------- bmy_20435T0/1-264 ---------- --------MR FDYVWLRDHC RSASCYNSKT HQRSLDTASV 101 150 ENSP00000335261/1-421 DLCIKPKTIR LDETTLFFTW PDGHVTKYDL NWLVKNSYEG QKQKVIQPRI ENSBTAP00000015469/1-301 ---------- ---------- PDGHVTRYDL DWLMKNSYEG QKQKVIQPRI ENSTTRP00000007954/1-421 DLCIQPKTIR LDETTLFFTW PDGHVTRYDL DWLVKNSYEG QKQKVIQPRI BACU010877/1-362 ---------- ---------- PDGHVTRYDL DWLVKNSYEG QKQKVIQPRI bmy_20435T0/1-264 DLCIQPKTIR LDETTLFFTW PDGHVTRYDL EWLVKNSYEG QKQKVIQPRI 151 200 ENSP00000335261/1-421 LWNAEIYQQA QVPSVDCQSF LETNEGLKKF LQNFLLYGIA FVENVPPTQE ENSBTAP00000015469/1-301 LWNAEIYQQA QVPAVDFQTF LETKEGLKNF LQNFLLYGIA FVENVPPTQK ENSTTRP00000007954/1-421 LWNAEIYQQA QVPSVDFQSF LETKEGLKNF LQNFLLYGIA FVENVPPTQE BACU010877/1-362 LWNAEIYQQA QVPSVDFQSF LETKEGLKNF LQNFLLYGIA FVENVPPTQE bmy_20435T0/1-264 LWNAEIYQQA QVPSVDFQSF LETKEGLKNF LQNFLLYGIA FVENVPPTQE 201 250 ENSP00000335261/1-421 HTEKLAERIS LIRETIYGRM WYFTSDFSRG DTAYTKLALD RHTDTTYFQE ENSBTAP00000015469/1-301 HTEKLAERIS LIRETIYGRM WFFTSDFSRG DTAYTKLALD RHTDTTYFQE ENSTTRP00000007954/1-421 HTEKLAERIS LIRETIYGRM WYFTSDFSRG DTAYTKLALD RHTDTTYFQE BACU010877/1-362 HTEKLAERIS LIRETIYGRM WYFTSDFSRG DTAYTKLALD RHTDTTYFQE bmy_20435T0/1-264 HTEKLAERIS LIRETIYGRM WYFTSDFSRG DTAYTKLALD RHTDTTYFQE 251 300 ENSP00000335261/1-421 PCGIQVFHCL KHEGTGGRTL LVDGFYAAEQ VLQKAPEEFE LLSKVPLKHE ENSBTAP00000015469/1-301 PCGIQVFHCL KHEGTGGRTL LVDGFYAAEQ VLQKAPEEFE LLSKVPLKHE ENSTTRP00000007954/1-421 PCGIQVFHCL KHEGTGGRTL LVDGFYAAEQ VLQKAPEEFE LLSKVPLKHE BACU010877/1-362 PCGIQVFHCL KHEGTGGRTL LVDGFYAAEQ VLQKAPEEFE LLSNVPLKHE bmy_20435T0/1-264 PCGIQVFHCL KHEGTGGRTL LVDGFYAAEQ VLQKAPEEFE LLSKVPLKHE 301 350 ENSP00000335261/1-421 YIEDVGECHN HMIGIGPVLN IYPWNKELYL IRYNNYDRAV INTVPYDVVH ENSBTAP00000015469/1-301 YIENVGECQN HMIGVGPVLN IYPWNKELYL IRYNNYDRAV INTVPYDVVH ENSTTRP00000007954/1-421 YIENVGECHN HMIGVGPVLN IYPWNKELYM IRYNNYDRAV INTVPYDVVH BACU010877/1-362 YIENVGECHN HMIGVGPVLN IYPWNKELYM IRYNNYDRAV INTVPYDVVH bmy_20435T0/1-264 YIENVGECHN HMIGVGPVLN IYPWNKELYM IR-------- ---------- 351 400 ENSP00000335261/1-421 RWYTAHRTLT IELRRPENEF WVKLKPGRVL FIDNWRVLHG RECFTGYRQL ENSBTAP00000015469/1-301 RWYTAHRTLT RELRRPENEF WVKLKPGKVL FIDNWRVLHG RESFTGYRQL ENSTTRP00000007954/1-421 RWYTAHRTLT IELRKPENEF WVKLKPGRVL FIDNWRVLHG RESFTGYRQL BACU010877/1-362 RWYTAHRTLT IELRKPENDF WVKLKPGRVL FIDNWRVLHG RESFTGYRQL bmy_20435T0/1-264 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000335261/1-421 CGCYLTRDDV LNTARLLGLQ A ENSBTAP00000015469/1-301 CGCYLTRDDV LNTARLLGLQ A ENSTTRP00000007954/1-421 CGCYLTRDDV LNTARLLGLQ A BACU010877/1-362 CGCYLTRDDV LNTARLLGLQ A bmy_20435T0/1-264 ---------- ---------- -