KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:00 2014 Check: 00 .. Name: ENSP00000387784/1-1333 Len: 1333 Check: 7200 Weight: 1.00 Name: ENSBTAP00000015471/1-1333 Len: 1333 Check: 8813 Weight: 1.00 Name: ENSTTRP00000013627/1-1304 Len: 1333 Check: 8308 Weight: 1.00 Name: bmy_07470T0/1-912 Len: 1333 Check: 2712 Weight: 1.00 Name: BACU020200/1-1263 Len: 1333 Check: 3353 Weight: 1.00 // 1 50 ENSP00000387784/1-1333 MQAQQLPYEF FSEENAPKWR GLLVPALKKV QGQVHPTLES NDDALQYVEE ENSBTAP00000015471/1-1333 YLAQNLVYGS KTEEKNQIWS LRVLPSFEEV QGQVHPTLES SDDALQYVEE ENSTTRP00000013627/1-1304 ---------- ---------- ---------V QGQVHPTLES SDDALQYVEE bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000387784/1-1333 LILQLLNMLC QAQPRSASDV EERVQKSFPH PIDKWAIADA QSAIEKRKRR ENSBTAP00000015471/1-1333 LILQLLNMLC QAQPRSASDV EERVQKSFPH PIDKWAIADA QSAIEKRKRR ENSTTRP00000013627/1-1304 LILQLLNMLC QAQPRSASDV EERVQKSFPH PIDKWAIADA QSAIEKRKRR bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 ---------- ---------- KERVQKSFPH PIDKWAIADA QSAIEKRKRR 101 150 ENSP00000387784/1-1333 NPLSLPVEKI HPLLKEVLGY KIDHQVSVYI VAVLEYISAD ILKLVGNYVR ENSBTAP00000015471/1-1333 NPLSLPVEKI HPLLKEVLGY KIDHQVSVYI VAVLEYISAD ILKLVGNYVR ENSTTRP00000013627/1-1304 NPLSLPVEKI HPLLKEVLGY KIDHQVSVYI VAVLEYISAD ILKLVGNYVR bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 NPLSLPVEKI HPLLKEVLGY KIDHQVSVYI VAVLEYISAD ILKLVGNYVR 151 200 ENSP00000387784/1-1333 NIRHYEITKQ DIKVAMCADK VLMDMFHQDV EDINILSLTD EEPSTSGEQT ENSBTAP00000015471/1-1333 NIRHYEITKQ DIKVAMCADK VLMDMFHQDV EDINILSLTD EEPSTSGEQT ENSTTRP00000013627/1-1304 NIRHYEITKQ DIKVAMCADK VLMDMFHQDV EDINILSLTD EEPSTSGEQT bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 NIRHYEITKQ DIKVAMCADK VLMDMFHQDV EDIKILSLTD EEPSTSGEQT 201 250 ENSP00000387784/1-1333 YYDLVKAFMA EIRQYIRELN LIIKVFREPF VSNSKLFSAN DVENIFSRIV ENSBTAP00000015471/1-1333 YYDLVKAFMA EIRQYIRELN LIIKVFREPF VSNSKLFSAN DVENIFSRIV ENSTTRP00000013627/1-1304 YYDLVKAFMA EIRQYIRELN LIIKVFREPF VSNSKLFSAN DVENIFSRIV bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 YYDLVKAFMA EIRQYIRELN LIIKVFREPF VSNSKLFSAN DVENIFSRIV 251 300 ENSP00000387784/1-1333 DIHELSVKLL GHIEDTVEMT DEGSPHPLVG SCFEDLAEEL AFDPYESYAR ENSBTAP00000015471/1-1333 DIHELSVKLL GHIEDTVEMT DEGSPHPLVG SCFEDLAEEL AFDPYESYAR ENSTTRP00000013627/1-1304 DIHELSVKLL GHIEDTVEMT DEGSPHPLVG SCFEDLAEEL AFDPYESYAR bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 DIHELSVKLL GHIEDTVEMT DEGSPHPLVG SCFEDLAEEL AFDPYESYAR 301 350 ENSP00000387784/1-1333 DILRPGFHDR FLSQLSKPGA ALYLQSIGEG FKEAVQYVLP RLLLAPVYHC ENSBTAP00000015471/1-1333 DILRPGFHDR FLSQLSKPGA ALYLQSIGEG FKEAVQYVLP RLLLAPVYHC ENSTTRP00000013627/1-1304 DILRPGFHDR FLSQLSKPGA ALYLQSIGEG FKEAVQYVLP RLLLAPVYHC bmy_07470T0/1-912 ---------- ---------- ---------- ---------- ---------- BACU020200/1-1263 DILRPGFHDR FLSQLSKPGA ALYLQSIGEG FKEAVQYVLP RLLLAPVYHC 351 400 ENSP00000387784/1-1333 LHYFELLKQL EEKSEDQEDK ECLKQAITAL LNVQSGMEKI CSKSLAKRRL ENSBTAP00000015471/1-1333 LHYFELLKQL EEKSEDQEDK ECLKQAITAL LNVQSGMEKI CSKSLAKRRL ENSTTRP00000013627/1-1304 LHYFELLKQL EEKSEDQEDK ECLKQAITAL LNVQSGMEKI CSKSLAKRRL bmy_07470T0/1-912 ---------- ---------- ---------- ------MEKI CSKSLAKRRL BACU020200/1-1263 LHYFELLKQL EEKSEDQEDK ECLKQAITAL LNVQSGMEKI CSKSLAKRRL 401 450 ENSP00000387784/1-1333 SESACRFYSQ QMKGKQLAIK KMNEIQKNID GWEGKDIGQC CNEFIMEGTL ENSBTAP00000015471/1-1333 SESACRFYSQ QMKGKQLAIK KMNEIQKNID GWEGKDIGQC CNEFIMEGTL ENSTTRP00000013627/1-1304 SESACRFYSQ QMKGKQLAIK KMNEIQKNID GWEGKDIGQC CNEFIMEGTL bmy_07470T0/1-912 SESACRFYSQ QMKGKQLAIK KMNEIQKNID GWEGKDIGQC CNEFIMEGTL BACU020200/1-1263 SESACRFYSQ QMKGKQLAIK KMNEIQKNID GWEGKDIGQC CNEFIMEGTL 451 500 ENSP00000387784/1-1333 TRVGAKHERH IFLFDGLMIC CKSNHGQPRL PGASNAEYRL KEKFFMRKVQ ENSBTAP00000015471/1-1333 TRVGAKHERH IFLFDGLMIC CKSNHGQPRL PGASNAEYRL KEKFFMRKVQ ENSTTRP00000013627/1-1304 TRVGAKHERH IFLFDGLMIC CKSNHGQPRL PGASNAEYRL KEKFFMRKVQ bmy_07470T0/1-912 TRVGAKHERH IFLFDGLMIC CKSNHGQPRL PGASNAEYRL KEKFFMRKVQ BACU020200/1-1263 TRVGAKHERH IFLFDGLMIC CKSNHGQPRL PGASNAEYRL KEKFFMRKVQ 501 550 ENSP00000387784/1-1333 INDKDDTNEY KHAFEIILKD ENSVIFSAKS AEEKNNWMAA LISLQYRSTL ENSBTAP00000015471/1-1333 INDKDDTSEY KHAFEIILKD ENSVIFSAKS AEEKNNWMAA LISLQYRSTL ENSTTRP00000013627/1-1304 INDKDDTNEY KHAFEIILKD ENSVIFSAKS AEEKNNWMAA LISLQYRSTL bmy_07470T0/1-912 INDKDDTNEY KHAFEIILKD ENSVIFSAKS AEEKNNWMAA LISLQYRSTL BACU020200/1-1263 INDKDDTNEY KHAFEIILKD ENSVIFSAKS AEEKNNWMAA LISLQYRSTL 551 600 ENSP00000387784/1-1333 ERMLDVTMLQ EEKEEQMRLP SADVYRFAEP DSEENIIFEE NMQPKAGIPI ENSBTAP00000015471/1-1333 ERMLDVTMLQ EEKEEQMRLP SADVYRFAEP DSEENIIFEE NVQPKAGIPI ENSTTRP00000013627/1-1304 ERMLDVTMLQ EEKEEQMRLP SADVYRFAEP DSEENIIFEE NVQPKAGIPI bmy_07470T0/1-912 ERMLDVTMLQ EEKEEQMRLP SADVYRFAEP DSEENIIFEE NVQPKAGIPI BACU020200/1-1263 ERMLDVTMLQ EEKEEQMRLP SADVYRFAEP DSEENIIFEE NVQPKAGIPI 601 650 ENSP00000387784/1-1333 IKAGTVIKLI ERLTYHMYAD PNFVRTFLTT YRSFCKPQEL LSLIIERFEI ENSBTAP00000015471/1-1333 IKAGTVIKLI ERLTYHMYAD PNFVRTFLTT YRSFCKPQEL LSLIIERFEI ENSTTRP00000013627/1-1304 IKAGTVIKLI ERLTYHMYAD PNFVRTFLTT YRSFCKPQEL LSLIIERFEI bmy_07470T0/1-912 IKAGTVIKLI ERLTYHMYAD PNFVRTFLTT YRSFCKPQEL LSLLIERFEI BACU020200/1-1263 IKAGTVIKLI ERLTYHMYAD PNFVRTFLTT YRSFCKPQEL LSLLIERFEI 651 700 ENSP00000387784/1-1333 PEPEPTEADR IAIENGDQPL SAELKRFRKE YIQPVQLRVL NVCRHWVEHH ENSBTAP00000015471/1-1333 PEPEPTEADR IAIENGDQPL SAELKRFRKE YIQPVQLRVL NVCRHWVEHH ENSTTRP00000013627/1-1304 PEPEPTEADR IAIENGDQPL SAELKRFRKE YIQPVQLRVL NVCRHWVEHH bmy_07470T0/1-912 PEPEPTEADR IAIENGDQPL SAELKRFRKE YIQPVQLRVL NVCRHWVEHH BACU020200/1-1263 PEPEPTEADR IAIENGDQPL SAELKRFRKE YIQPVQLRVL NVCRHWVEHH 701 750 ENSP00000387784/1-1333 FYDFERDAYL LQRMEEFIGT VRGKAMKKWV ESITKIIQRK KIARDNGPGH ENSBTAP00000015471/1-1333 FYDFERDADL LQRMEEFIGT VRGKAMKKWV ESITKIIQRK KIARDNGPGH ENSTTRP00000013627/1-1304 FYDFERDADL LQRMEEFIGT VRGKAMKKWV ESITKIIQRK KIARDNGPGH bmy_07470T0/1-912 FYDFERDADL LQRMEEFIGT VRGKAMKKWV ESITKIIQRK KIARDNGPGH BACU020200/1-1263 FYDFERDADL LQRMEEFIGT VRGKAMKKWV ESITKIIQRK KIARDNGPGH 751 800 ENSP00000387784/1-1333 NITFQSSPPT VEWHISRPGH IETFDLLTLH PIEIARQLTL LESDLYRAVQ ENSBTAP00000015471/1-1333 NITFQSSPPT VEWHISRPGH IETFDLLTLH PIEIARQLTL LESDLYRAVQ ENSTTRP00000013627/1-1304 NITFQSSPPT VEWHISRPGH IETFDLLTLH PIEIARQLTL LESDLYRAVQ bmy_07470T0/1-912 NITFQSSPPT VE-------- ---------- ---------- -------AVQ BACU020200/1-1263 NITFQSSPPT VEWHISRPGH IETFDLLTLH PIEIARQLTL LESDLYRAVQ 801 850 ENSP00000387784/1-1333 PSELVGSVWT KEDKEINSPN LLKMIRHTTN LTLWFEKCIV ETENLEERVA ENSBTAP00000015471/1-1333 PSELVGSVWT KEDKEINSPN LLKMIRHTTN LTLWFEKCIV ETENLEERVA ENSTTRP00000013627/1-1304 PSELVGSVWT KEDKEINSPN LLKMIRHTTN LTLWFEKCIV ETENLEERVA bmy_07470T0/1-912 PSELVGSVWT KEDKEINSPN LLKMIRHTTN LTLWFEKCIV ETENLEERVA BACU020200/1-1263 PSELVGSVWT KEDKEINSPN LLKMIRHTTN LTLWFEKCIV ETENLEERVA 851 900 ENSP00000387784/1-1333 VVSRIIEILQ VFQELNNFNG VLEVVSAMNS SPVYRLDHTF EQIPSRQKKI ENSBTAP00000015471/1-1333 VVSRIIEILQ VFQELNNFNG VLEVVSAMNS SPVYRLDHTF EQIPSRQKKI ENSTTRP00000013627/1-1304 VVSRIIEILQ VFQELNNFNG VLEVVSAMNS SPVYRLDHTF EQIPSRQKKI bmy_07470T0/1-912 VVSRIIEILQ VFQELNNFNG VLEVVSAMNS SPVYRLDHTF EQIPSRQKKI BACU020200/1-1263 VVSRIIEILQ VFQELNNFNG VLEVVSAMNS SPVYRLDHTF EQIPSRQKKI 901 950 ENSP00000387784/1-1333 LEEAHELSED HYKKYLAKLR SINPPCVPFF GIYLTNILKT EEGNPEVLKR ENSBTAP00000015471/1-1333 LEEAHELSED HYKKYLAKLR SINPPCVPFF GIYLTNILKT EEGNPEVLKR ENSTTRP00000013627/1-1304 LEEAHELSED HYKKYLAKLR SINPPCVPFF GIYLTNILKT EEGNPEVLKR bmy_07470T0/1-912 LEEAHELSED HYKKYLAKLR SINPPCVPFF GIYLTNILKT EEGNPEVLKR BACU020200/1-1263 LEEAHELSED HYKKYLAKLR SINPPCVPFF GIYLTNILKT EEGNPEVLKR 951 1000 ENSP00000387784/1-1333 HGKELINFSK RRKVAEITGE IQQYQNQPYC LRVESDIKRF FENLNPMGNS ENSBTAP00000015471/1-1333 HGKELINFSK RRKVAEITGE IQQYQNQPYC LRVESDIKRF FENLNPMGNS ENSTTRP00000013627/1-1304 HGKELINFSK RRKVAEITGE IQQYQNQPYC LRVESDIKRF FENLNPMGNS bmy_07470T0/1-912 HGKELINFSK RRKVAEITGE IQQYQNQPYC LRVESDIKRF FENLNPMGNS BACU020200/1-1263 HGKELINFSK RRKVAEITGE IQQYQNQPYC LRVESDIKRF FENLNPMGNS 1001 1050 ENSP00000387784/1-1333 MEKEFTDYLF NKSLEIEPRN PKPLPRFPKK YSYPLKSPGV RPSNPRPGTM ENSBTAP00000015471/1-1333 MEKEFTDYLF NKSLEIEPRN PKPLPRFPKK YNYPLKSPGV RPSNPRPGTM ENSTTRP00000013627/1-1304 MEKEFTDYLF NKSLEIEPRN PKPLPRFPKK YSYPLKSPGV RPSNPRPGTM bmy_07470T0/1-912 MEKEFTDYLF NKSLEIEPRN PKPLPRFPKK YSYPLKSPGV RPSNPRPGTM BACU020200/1-1263 MEKEFTDYLF NKSLEIEPRN PKPLPRFPKK YSYPLKSPGV RPSNPRPGTM 1051 1100 ENSP00000387784/1-1333 RHPTPLQQEP RKISYSRIPE SETESTASAP NSPRTPLTPP PASGASSTTD ENSBTAP00000015471/1-1333 RHPTPLQQEP RKISYSRIPE SETESTASAP NSPRTPLTPP PASGASSTTD ENSTTRP00000013627/1-1304 RHPTPLQQEP RKISYSRIPE SETESTASAP NSPRTPLTPP PASGASSTTD bmy_07470T0/1-912 RHPTPLQQEP RKISYSRIPE SETESTASAP NSPRTPLTPP PASGASSTTD BACU020200/1-1263 RHPTPLQQEP RKISYSRIPE SETESTASAP NSPRTPLTPP PASGASSTTD 1101 1150 ENSP00000387784/1-1333 VCSVFDSDHS SPFHSSNDTV FIQVTLPHGP RSASVSSISL TKGTDEVPVP ENSBTAP00000015471/1-1333 VCSVFDSDHS SPFHSSSDTV FIQVTLPHGP RSASVSSISL TKSTDEVPVP ENSTTRP00000013627/1-1304 VCSVFDSDHS SPFHSSSDTV FIQVTLPHGP RSASVSSISL TKSTDEVPVP bmy_07470T0/1-912 VCSVFDSDHS SPFHSSSDTV FIQVTLPHGP RSASVSSISL TKSTDEVPVP BACU020200/1-1263 VCSVFDSDHS SPFHSSSDTV FIQVTLPHGP RSASVSSISL TKSTDEVPVP 1151 1200 ENSP00000387784/1-1333 PPVPPRRRPE SAPAESSPSK IMSKHLDSPP AIPPRQPTSK AYSPRYSISD ENSBTAP00000015471/1-1333 PPVPPRRRPE SAPAESSPSK MMSKHLDSPP AIPPRQPTSK AYSPRYSISD ENSTTRP00000013627/1-1304 PPVPPRRRPE SAPAESSPSK IMSKHLDSPP AIPPRQPTSK AYSPRYSVSD bmy_07470T0/1-912 PPVPPRRRPE SAPAESSPSK IMSKHLDSPP AIPPRQPTSK AYSPRYSVSD BACU020200/1-1263 PPVPPRRRPE SAPAESSPSK IMSKHLDSPP AIPPRQPTSK AYSPRYSVSD 1201 1250 ENSP00000387784/1-1333 RTSISDPPES PPLLPPREPV RTPDVFSSSP LHLQPPPLGK KSDHGNAFFP ENSBTAP00000015471/1-1333 RTSISDPPES PPLLPPREPV RTPDVFSSSP LHLQPPPLGK KSDHSNAFFP ENSTTRP00000013627/1-1304 RTSISDPPES PPLLPPREPV RTPDVFSSSP LHLQPPPLGK KSDHSNAFFP bmy_07470T0/1-912 RTSISDPPES PPLLPPREPV RTPDVFSSSP LHLQPPPLGK KSDHSNAFFP BACU020200/1-1263 RTSISDPPES PPLLPPREPV RTPDVFSSSP LHLQPPPLGK KSDHSNAFFP 1251 1300 ENSP00000387784/1-1333 NSPSPFTPPP PQTPSPHGTR RHLPSPPLTQ EVDLHSIAGP PVPPRQSTSQ ENSBTAP00000015471/1-1333 NSPSPFTPPP PQTPSPHGTR RHLPSPPLTQ EVDLHSIAGP PVPPRQSTSQ ENSTTRP00000013627/1-1304 NSPSPFTPPP PQTPSPHGTR RHLPSPPLTQ EVDLHSIAGP PVPPRQSTSQ bmy_07470T0/1-912 NSPSPFTPPP PQTPSPHGTR RHLPSPPLTQ EVDLHSIAGP PVPPRQSTSQ BACU020200/1-1263 NSPSPFTPPP PQTPSPHGTR RHLPSPPLTQ EVDLHSIAGP PVPPRQSTSQ 1301 1350 ENSP00000387784/1-1333 HIPKLPPKTY KREHTHPSMH RDGPPLLENA HSS ENSBTAP00000015471/1-1333 HIPKLPPKTY KREHTHPSMH RDGPPLLENA HSS ENSTTRP00000013627/1-1304 HIPKLPPKTY KREHTHPSMH RDGPPLLENA HSS bmy_07470T0/1-912 HIPKLPPKTY KREHTHPSMH RDGPPLLENA HSS BACU020200/1-1263 HIPKLPPKTY KREHTHPSMH RDGPPLLENA HSS