KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:01 2014 Check: 00 .. Name: ENSTTRP00000008622/1-589 Len: 967 Check: 6366 Weight: 1.00 Name: bmy_22678T0/1-546 Len: 967 Check: 4237 Weight: 1.00 Name: BACU008711/1-895 Len: 967 Check: 4591 Weight: 1.00 Name: ENSP00000281828/1-589 Len: 967 Check: 9207 Weight: 1.00 Name: ENSBTAP00000015473/1-589 Len: 967 Check: 8465 Weight: 1.00 // 1 50 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 MLKLKAINVD LQSDAALQVD ISDALSERDK VKFTVHTKSS LPNFKQNEFS ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 VVRQHEEFIW LHDSFVENED YAGYIIPPAP PRPDFDASRE KLQKLGEGEG ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 SMTKEEFTKM KQELEAEYLA IFKKTVAMHE VFLCRVAAHP ILRKDLNFHV ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 FLEYNQDLSV RGKNKKEKLE DFFKNMVKSA DGVIVSGVKD VDDFFEHERT ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 FLLEYHNRVK DASAKSDRMT RSHKSAADDY NRIGSSLYAL GTQDSTDICK ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 FFLKVSELFD KTRKIEARVS ADEDLKLSDL LKYYLRESQA AKDLLYRRSR ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000008622/1-589 ---------- ---------- ---------- ---------- ---------- bmy_22678T0/1-546 ---------- ---------- ---------- ---------- ---------- BACU008711/1-895 SLVDYENANK ALDKARAKNK DVLQAETSQQ LCCQKFEKIS ESAKQELIDF ENSP00000281828/1-589 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015473/1-589 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000008622/1-589 ---------- ---------- --------MP TVSLKRDLLF RALGRTYTDE bmy_22678T0/1-546 ---------- ---------- --------MP TVSLKRDLLF RALGRTYMDG BACU008711/1-895 KTRRVAAFRK NLVELAELEL KHAKAGLAMP TVSLKRDLLV RALGRPYTDR ENSP00000281828/1-589 ---------- ---------- --------MP TVSVKRDLLF QALGRTYTDE ENSBTAP00000015473/1-589 ---------- ---------- --------MP TVSVKRDLLF RALGRTYTDE 401 450 ENSTTRP00000008622/1-589 EFDELCFEFG LELDEITSEK EIISKEQGNE KAQGASDVVL YKIDVPANRY bmy_22678T0/1-546 EFDELCFEFG LELDEITSEK EILSKEQGNE KAQGASNVVL YKTDVLANRY BACU008711/1-895 EFDELCFEFG LELDEITSEK EILSNEQ--- ---------- ---------- ENSP00000281828/1-589 EFDELCFEFG LELDEITSEK EIISKEQGNV KAAGASDVVL YKIDVPANRY ENSBTAP00000015473/1-589 EFDELCFEFG LELDEITSEK EIISKEQGNE KAHGASDVVL YKIDVPANRY 451 500 ENSTTRP00000008622/1-589 DLLCLEGLVR GLQVFKERIK APMYKRVMPN GEIQKLIITE ETAKIRPYAV bmy_22678T0/1-546 DLLCLEGLVR ALQVFKERIK APMYKRVMPN GESQKLIITE ETAKIRPSAV BACU008711/1-895 ------GLVR ALQVFKERIK APMYKRVMPN GEIQKLIITE ETAKIRPYSV ENSP00000281828/1-589 DLLCLEGLVR GLQVFKERIK APVYKRVMPD GKIQKLIITE ETAKIRPFAV ENSBTAP00000015473/1-589 DLLCLEGLVR GLQVFKERIK TPMYKRVMPK GEIQKLIITE ETAKIRPYAV 501 550 ENSTTRP00000008622/1-589 AAVLRNIKFT KDRYESFIEL QEKLHQNICR KRALVAIGTH DLDTLSGPFT bmy_22678T0/1-546 AAVLRNIKFT KDRYDSFVEL QEKLHQNICR KRALVAIGTR DLDTLSGPFT BACU008711/1-895 AAVLRNIKFT KDRYDSFVEL QEKLHQNICR KRALVAIGTR DLDTLSGPFT ENSP00000281828/1-589 AAVLRNIKFT KDRYDSFIEL QEKLHQNICR KRALVAIGTH DLDTLSGPFT ENSBTAP00000015473/1-589 AAVLRNIKFT KDRYDSFIEL QEKLHQNICR KRALVAIGTH DLDTLSGPFT 551 600 ENSTTRP00000008622/1-589 YTAKKPSDIK FKPLNKTKEY TACELMNIYK XXXXXXXXXX XXXXXXXXXX bmy_22678T0/1-546 YTAKKPSDIK FKPLNKTKEY TACELMNVYK TDNHLKHYSH IIENKLLYPV BACU008711/1-895 YTEKNPSDIK FKPLNKTKEY TACELMNIYK TDNHLKHYSH IIENKLLYPV ENSP00000281828/1-589 YTAKRPSDIK FKPLNKTKEY TACELMNIYK TDNHLKHYLH IIENKPLYPV ENSBTAP00000015473/1-589 YTAKKPSDIK FKPLNKSKEY TACELMNIYK TDNQLKHYLH IIENKPLYPV 601 650 ENSTTRP00000008622/1-589 XXXXXXXXXX XXXXXXXHHS KITVNTRNIF IECTGTDFTK AKIVLDIIVT bmy_22678T0/1-546 IYDSNGVVLS MPLAINGKHS KITVNTRNVF IECTGTDFTK AKIVLDIIVT BACU008711/1-895 IYDTNGVVLS MPPAINGKHS KITVNTRNVF IECTGTDFTK AKIVLDIIVT ENSP00000281828/1-589 IYDSNGVVLS MPPIINGDHS RITVNTRNIF IECTGTDFTK AKIVLDIIVT ENSBTAP00000015473/1-589 IYDSKGVVLS MPPIINGNHS KITVNTKNVF IECTGTDFTK AKIVLDVIVT 651 700 ENSTTRP00000008622/1-589 TFSEYCENQF TVEAAEVVFP NGKLHTFPEL AYRKEMVRAD LINKKVGIXX bmy_22678T0/1-546 TFSEYCENQF TVEAAEVVFP NEKLHTFPEL AYRKEMVRAD LINKKVGVRE BACU008711/1-895 TFSEYCENQF TVEAAEVVFP NGKLHTFPEL AYRKEMVRAD LINKKVGVRE ENSP00000281828/1-589 MFSEYCENQF TVEAAEVVFP NGKSHTFPEL AYRKEMVRAD LINKKVGIRE ENSBTAP00000015473/1-589 TFSEYCENQF TVEAAEVVFP NGKLHTFPEL AYRKEMVRAD LINKKVGIRE 701 750 ENSTTRP00000008622/1-589 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_22678T0/1-546 TPENLAKLLT RMCLKSEVIG DGDQIEIEIP PTRNDIIHAC DIIEDAAIAY BACU008711/1-895 TPENLTKLLT RMCLKSEVIG DGDQIEIEIP PTRDDIIHAC DIIEDAAIAY ENSP00000281828/1-589 TPENLAKLLT RMYLKSEVIG DGNQIEIEIP PTRADIIHAC DIVEDAAIAY ENSBTAP00000015473/1-589 TPENLAKLLT RMCLKSEVIG DGNQIEVEIP PTRADIIHAC DIIEDAAIAY 751 800 ENSTTRP00000008622/1-589 XXXXXXXXXX XXXXXXXXFP LNKLTELLRH DMAAAGFTEA LTFALCSQED bmy_22678T0/1-546 GYNNIQMTLP KTYTIDNEFP LNKLTELLRH DMAAAGFTEA LTFALCSQED BACU008711/1-895 GYNNIQMTLP KTYTIDNEFP LNKLTELLRH DMAAAGFTEA LTFALCSQED ENSP00000281828/1-589 GYNNIQMTLP KTYTIANQFP LNKLTELLRH DMAAAGFTEA LTFALCSQED ENSBTAP00000015473/1-589 GYNNIQMTLP KTYTIANQFP LNKLTELLRQ DMAAAGFTEA LTFALCSQED 801 850 ENSTTRP00000008622/1-589 IADKLGLDIS ATKAVLISNP KTAEFQVART TLLPGLLKTI AANRKMPLPL bmy_22678T0/1-546 IADKPGLDIS AKKAVHISNP ITAEFQVAHT TLLPGLLKTI AVNRKMPFPL BACU008711/1-895 IADKLGLDIS ATKAVHISNP KTAEFQVAHT TLLPGLLKTI AVNRKMPLPL ENSP00000281828/1-589 IADKLGVDIS ATKAVHISNP KTAEFQVART TLLPGLLKTI AANRKMPLPL ENSBTAP00000015473/1-589 IADKLGMDIS ATKAVHISNP KTAEFQVART TLLPGLLKTL AANRKMPLPL 851 900 ENSTTRP00000008622/1-589 KLFEISDIVI KDSSRDVGAR NYRHLCAVYY NKNPGFEIIH GLLDRLMQLL bmy_22678T0/1-546 KLFEISDIVR KDSSRDVGAR NYRHLCAVYY NKNSGFEIIH GLLDRITQLL BACU008711/1-895 KLFEISDIVR KDSSRDVGAR NYRHLCAVYY NKNSGFEIIH GLLDRITQLL ENSP00000281828/1-589 KLFEISDIVI KDSNTDVGAK NYRHLCAVYY NKNPGFEIIH GLLDRIMQLL ENSBTAP00000015473/1-589 KLFEISDIVI KDSSRDVGAR NYRHLCAVYY NKNPGFEIIH GLLDRIMQLL 901 950 ENSTTRP00000008622/1-589 DVPPGEKKGG YVIKASEGPA FFPGRCAEIF ARGQSIGKLG VLHPDVITKF bmy_22678T0/1-546 DVPPGKKKGG YLIKASESPA FFPG------ ---------- ---------- BACU008711/1-895 DVPPGEKKGG YLIKVSERPA FFPG------ ---------- ---------- ENSP00000281828/1-589 DVPPGEDKGG YVIKASEGPA FFPGRCAEIF ARGQSVGKLG VLHPDVITKF ENSBTAP00000015473/1-589 DVPPGEKKGG YAIKASEGPV FFPGRCAEIF ARGQSIGKLG VLHPDVITKF 951 1000 ENSTTRP00000008622/1-589 ELTMPCSCVE INIEPFL bmy_22678T0/1-546 ---------- ------- BACU008711/1-895 ---------- ------- ENSP00000281828/1-589 ELTMPCSSLE INVGPFL ENSBTAP00000015473/1-589 ELTMPCSCVE INIEPFL