KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:07 2014 Check: 00 .. Name: ENSTTRP00000008903/1-630 Len: 634 Check: 5774 Weight: 1.00 Name: ENSP00000329668/1-630 Len: 634 Check: 1009 Weight: 1.00 Name: BACU003221/1-576 Len: 634 Check: 3441 Weight: 1.00 Name: bmy_17843T0/1-412 Len: 634 Check: 3019 Weight: 1.00 Name: ENSBTAP00000015489/1-344 Len: 634 Check: 7316 Weight: 1.00 // 1 50 ENSTTRP00000008903/1-630 MRERGPDSLA GLVLYVGLFR HPGMLHRAKY SRFRNESITS LDEGSPGGSG ENSP00000329668/1-630 MRERGQDSLA GLVLYVGLFG HPGMLHRAKY SRFRNESITS LDEGSSGGSV BACU003221/1-576 ---------- ---------- --------MH LKPAIQSCFS CSGGSQKHLV bmy_17843T0/1-412 ---------- ---------- ---------- MAPGSRRLPP SAEGHSRQA- ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008903/1-630 GNKGSPQPPY PALAPHLPAE DATLASQESP TPLCTLIPRM ASVKLANPAT ENSP00000329668/1-630 GNKGSPQPPH PALAPHLPTE DATLPSQESP TPLCTLIPRM ASMKLANPAT BACU003221/1-576 G--------- ---------- --FFKGRGYS VACATQLLLF RIVVVVLP-- bmy_17843T0/1-412 ---------- ---------- --SHPSAGHC FPHKARTAR- ---------- ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008903/1-630 LLSLKNFCLG TKEVPRLKLQ ESQDPAPSSP ASPETSLNRA MPAPPPQRDA ENSP00000329668/1-630 LLSLKNFCLG TKEVPRLKLQ ESRDPGSSGP SSPETSLSRS GTAPPPQQDL BACU003221/1-576 VIEFLALVLA LEIRARDLAW LLPRAGPAGE ASLPQRLRHW LGGLLLHRAF bmy_17843T0/1-412 --SFQTLCKR LNL------- ---------- ---------- ---------- ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000008903/1-630 LGHRATSLTP DACPLPGPGE PTPGSRQDKH FLQHLLGMGM NYYVRYMGCI ENSP00000329668/1-630 VGHRATALTP DSCPLPGPGE PTLRSRQDRH FLQHLLGMGM NYCVRYMGCV BACU003221/1-576 LLQLWLGPGA GGVQGWLPAP AAYLHLRKVI LARHHIHLQV IAFLIELGQL bmy_17843T0/1-412 ---------- ---------- PARRFRQDRS YAA--VRLCA CASTVRLRDL ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000008903/1-630 EVLQSMRSLD FGMRTQVTRE AISRLCEAVP GANGAIKKRK PPAKFLSTVL ENSP00000329668/1-630 EVLQSMRSLD FGMRTQVTRE AISRLCEAVP GANGAIKKRK PPVKFLSTVL BACU003221/1-576 VHFRHCASGS TSPQGVFGRI GATRPC---- ---GSALAQA PCACVTLCVC bmy_17843T0/1-412 VRVRDPPRHR LPLGALFG-- ---------- ---GRQLAVP PWZCSRGPLV ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000008903/1-630 GKSNLQFSGM NIKLTISTCS LTLMNLDNQQ ----XXXXXX XXXXXXXXXX ENSP00000329668/1-630 GKSNLQFSGM NIKLTISTCS LTLMNLDNQQ ----IIANHH MQSISFASGG BACU003221/1-576 ATPQTPPTPR SAVWGPAARS STPGMFPGPA GWLFIIANHH MQSISFASGG bmy_17843T0/1-412 GSSCVRTSDL DA-------- ---------- ----IIANHH MQSISFASGG ENSBTAP00000015489/1-344 ---------- ---------- ---------- ---------- MQSISFASGG 301 350 ENSTTRP00000008903/1-630 XXDTTDYVAY VAKDPVNQRA CHILECSNGM AQDVISTIGQ AFELRFKQYL ENSP00000329668/1-630 DPDTTDYVAY VAKDPVNQRA CHILECHNGM AQDVISTIGQ AFELRFKQYL BACU003221/1-576 DPDTTDYVAY VAKDPVNQRA CHILECSNGM AQDVISTIGQ AFELRFKQYL bmy_17843T0/1-412 DPDTTDYVAY VAKDPVNQRA CHILECSNGM AQDVISTIGQ AFELRFKQYL ENSBTAP00000015489/1-344 DPDTTDYVAY VAKDPVNQRA CHILECRNGM AQDVISTIGQ AFELRFKQYL 351 400 ENSTTRP00000008903/1-630 KNPSLNTSSE SEEVHVDDHT EEREDHEYYN EIPGKQPPAG GVSDVRIKVQ ENSP00000329668/1-630 KNPSLNTSCE SEEVHIDSHA EEREDHEYYN EIPGKQPPVG GVSDMRIKVQ BACU003221/1-576 KNPSLNTSSE SEEVHVDDHA EEREDHEYYN EIPGKQPPAG GVSDVRIKVQ bmy_17843T0/1-412 KNPSLNTSSE SEEVHVDDHA EEREDHEYYN EIPGKQPPAG GVSDVRIKVQ ENSBTAP00000015489/1-344 KNPSLNTSCE SEEVPVDGHA EEREDHEYYN EIPGKQPPAG GVSDVRIKVQ 401 450 ENSTTRP00000008903/1-630 TTEQMAYCPI RCEKLCYLPG NSKCSSVYEN CLEQSRAIGN AHERGVQSRR ENSP00000329668/1-630 ATEQMAYCPI QCEKLCYLPG NSKCSSVYEN CLEQSRAIGN VHPRGVQSQR BACU003221/1-576 ATEQTAYCPI RCEKLCYLPG NSKCSSVYEN CLEQSRAIGN AHERGIQSQR bmy_17843T0/1-412 ATEQMAYCPI RCEKLCYLPG NSKCSSVYEN CLEQSRAI-- ---------- ENSBTAP00000015489/1-344 VTEQMAYCPI RCEKLCYLPG SSKSSSMYEN CLEQSRAIGN AHERGVPSQR 451 500 ENSTTRP00000008903/1-630 DTSLMKPACR VDLFDDPCYI NTQTLQSTLG SAGNQSPAHP LGTPWYREKA ENSP00000329668/1-630 DTSLLKHTCR VDLFDDPCYI NTQALQSTPG SAGNQRSAQP LGSPWHCGKA BACU003221/1-576 DTSLMKPACR VDLFDDPCYI NTQTLQSTLG SARNQSPAHP LGSPWYREKA bmy_17843T0/1-412 ---------- ---------- ---------- ---------- --------EA ENSBTAP00000015489/1-344 EASLMKHSCG ADLFDDPCYI NTQALRSTLG PAGNQSSPHP LGSPWPQGAA 501 550 ENSTTRP00000008903/1-630 PETVQPGATA QPASSHSLPH IKQQLRNEDC YHGKLSRKAA ESLLVKDGDF ENSP00000329668/1-630 PETVQPGATA QPASSHSLPH IKQQLWSEEC YHGKLSRKAA ESLLVKDGDF BACU003221/1-576 PETVQPGATA QPASSHSLPH IKQQLRNEDC YHGKLSRKAA ESLLVKDGDF bmy_17843T0/1-412 PETVQPGATA QPASSHSLPH IKQQLRNEDC YHGKLSRKAA ESLLVKDGDF ENSBTAP00000015489/1-344 PETVQPGATA QPASSHSLPH IKQQLRNEDC YHGKLSRKAA ESLLVKDGDF 551 600 ENSTTRP00000008903/1-630 LVRESATSPG QYVLSGLQGG QAKHLLLVDP EGKVRTKDHV FDNVGHLIRY ENSP00000329668/1-630 LVRESATSPG QYVLSGLQGG QAKHLLLVDP EGKVRTKDHV FDNVGHLIRY BACU003221/1-576 LVRESATSPG QYVLSGLQGG QAKHLLLVDP EGKVRTKDHV FDNVGHLIRY bmy_17843T0/1-412 LVRESATSPG QYVLSGLQGG QAKHLLLVDP EGKVRTKDHV FDNVGHLIRY ENSBTAP00000015489/1-344 LVRESATSPG QYVLSGLQGG QAKHLLLVDP EGKVRTKDHV FDNVGHLIRY 601 650 ENSTTRP00000008903/1-630 HMDNSLPIIS SGSEVSLKQP VRKDNNPVLL HSNK ENSP00000329668/1-630 HMDNSLPIIS SGSEVSLKQP VRKDNNPALL HSNK BACU003221/1-576 HMDNSLPIIS SGSEVSLKQP VRKDNNLVLL RSNK bmy_17843T0/1-412 HMDNSLPIIS SGSEVSLKQP VRKDNNPVLL HSNK ENSBTAP00000015489/1-344 HMDNSLPIIS SGSEVSLKQP VRKDNNPGLL HSNK