KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:07 2014 Check: 00 .. Name: ENSP00000316482/1-255 Len: 289 Check: 9274 Weight: 1.00 Name: ENSBTAP00000015491/1-236 Len: 289 Check: 5290 Weight: 1.00 Name: ENSTTRP00000006764/1-246 Len: 289 Check: 7839 Weight: 1.00 Name: bmy_22369T0/1-271 Len: 289 Check: 1341 Weight: 1.00 Name: BACU012513/1-220 Len: 289 Check: 4661 Weight: 1.00 // 1 50 ENSP00000316482/1-255 MWQGCAVERP VGRMTSQTPL PQS------- PRPRR----- ---------- ENSBTAP00000015491/1-236 ---------- ---------L PGDGTVGHSA SCA------- ---------- ENSTTRP00000006764/1-246 TWRGCAAPAP AGGMMSLTSE PDS------- PGPGP----- ---------- bmy_22369T0/1-271 ---------- ---MMSLTSA PGSRPLRQAV TPAGRRTSIV LWMRVNHELP BACU012513/1-220 ---------- ---MMSLTSA PGSRPLRQAV TPAGR----- ---------- 51 100 ENSP00000316482/1-255 ---------- --PTMSTVVE LNVGGEFHTT TLGTLRKFPG SKLAEMFSSL ENSBTAP00000015491/1-236 ---------- --PQESPVVE LNVGGEFYTT TLGTLRKFPG SKLAEMFSSP ENSTTRP00000006764/1-246 ---------- --STESPVVE LNVGGEFYTT TLGTLRKLPG SKLAEMFSSS bmy_22369T0/1-271 GDGAVGSLCL LCPQESPVVE LNVGGEFYTT TLGTLRKLPG SKLAEMFSSS BACU012513/1-220 ---------- --QTESPVVE LNVGGEFYTT TLGTLRKLPG SKLAEMFSSS 101 150 ENSP00000316482/1-255 AKASTDAEGR FFIDRPSTYF RPILDYLRTG QVPTQHIPEV YREAQFYEIK ENSBTAP00000015491/1-236 AKACLDAEGR FFIDRCGTYF GPILEYLRSG QLPTQHIPEV YREAQHYEIK ENSTTRP00000006764/1-246 AKACLDAEGR FFIDRCGTYF GPILEYLRSG QLPTQHIPEV YREAQFYEIK bmy_22369T0/1-271 AKACLDXEGR FFIDRCGTYF GPILEYLRSG QLPTQHIPEV YREAQFYEIK BACU012513/1-220 AKACLDAEGR FFIDRCGTYF GPILEYLRSG QLPTQHIPEV YREAQFYEIK 151 200 ENSP00000316482/1-255 PLVKLLEDMP QIFGEQVSRK QFLLQVPGYS ENLELMVRLA RAEAITARKS ENSBTAP00000015491/1-236 PLIKHLEDTP QIFGEQVARK QFLLQVPGYS ENLELMVRLA RAEAVAARCS ENSTTRP00000006764/1-246 PLIKLLEDMP QIFGEQVARK QFLLQVPGYS ENLELMVRLA RAEAVAARCS bmy_22369T0/1-271 PLIKLLEDMP QIFGEQVARK QFLLQVPGYS ENLELMVRLA RAEAVAARCS BACU012513/1-220 PLIKLLEDMP QIFGEQVARK QFLLQVPGYG ENLELMVRLA RAEAVAARCS 201 250 ENSP00000316482/1-255 SVLVCLVETE EQDAYYSEVL CFLQDKKMFK SVVKFGPWKA VLDNSDLMHC ENSBTAP00000015491/1-236 RVLVCLVRNE KEDANCADAL RSLEANK--R SVVKFGPWKA ALDISDLLDC ENSTTRP00000006764/1-246 RVLVCLVQNE KDDANCADAL RSLEADK--R SVVKFGPWKA ALDIRDLLDC bmy_22369T0/1-271 SVLVCLVQNE KDDANCADAL RSLEADK--R SVVKFGPWKA ALDIRDLLDC BACU012513/1-220 SVLVCLVQNE KDDANCADAL RSLEADK--R SVVKFGPWKA ALDIRDLLDC 251 300 ENSP00000316482/1-255 LEMDIKAQGY KVFSKFYLTY PTKRNEFHFN IYSFTFTWW ENSBTAP00000015491/1-236 LNMDIKAQGY QVCYSHNSPL PAKVSDY--- FYTFSFSWW ENSTTRP00000006764/1-246 MNMDIKAQGY QVHHTSITGQ GLR------- FYTFSFSWW bmy_22369T0/1-271 MNMDIKAQGY QVRYSHNSPL PXKVSDY--- FYTFSFSWW BACU012513/1-220 MNMDIEAQGY QI-------- ---------- ---------