KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:08 2014 Check: 00 .. Name: ENSP00000412673/1-479 Len: 479 Check: 3781 Weight: 1.00 Name: ENSTTRP00000003457/1-462 Len: 479 Check: 6763 Weight: 1.00 Name: ENSBTAP00000015496/1-422 Len: 479 Check: 8409 Weight: 1.00 Name: bmy_17633T0/1-405 Len: 479 Check: 6386 Weight: 1.00 Name: BACU016932/1-428 Len: 479 Check: 5673 Weight: 1.00 // 1 50 ENSP00000412673/1-479 MLAVPNMRFG IFLLWWGWVL ATESRMHWPG REVHEMSKKG RPQRQRREVH ENSTTRP00000003457/1-462 ------MKVG LFLLWWPWAL ATESRVHWRK RDVQEMSKKG RPQRQRPGAH ENSBTAP00000015496/1-422 ---------- ---------- ---------- ---------- ---------- bmy_17633T0/1-405 ---------- -------MVS EADPLSH--- ---------- ---------- BACU016932/1-428 ---------- -------MVS EADPLSH--- ---------- ---------- 51 100 ENSP00000412673/1-479 EDAHKQVSPI LRRSPDITKS PLTKSEQLLR IDDHDFSMRP GFGGPAIPVG ENSTTRP00000003457/1-462 KDA----LPV LKRSPDITKS PLTKSEQLLR IDDHDFSMRP GFGGPAIPVG ENSBTAP00000015496/1-422 -------SPV LKRSPDITKS PLTKSEQLLR IDDHDFSMRP GFGGPAIPVG bmy_17633T0/1-405 --------PI LKRSPDITKS PLTKSEQLLR IDDHDFSMRP GFGGPAIPVG BACU016932/1-428 --------PI LKRSPDITKS PLTKSEQLLR IDDHDFSMRP GFGGPAIPVG 101 150 ENSP00000412673/1-479 VDVQVESLDS ISEVDMDFTM TLYLRHYWKD ERLSFPSTNN LSMTFDGRLV ENSTTRP00000003457/1-462 VDVQVESLDS ISEVDMDFTM TLYLRHYWKD ERLSFPSTKN LSMTFDGRLV ENSBTAP00000015496/1-422 VDVQVESLDS ISEVDMDFTM TLYLRHYWKD ERLSFPSTNN LSMTFDGRLV bmy_17633T0/1-405 VDVQVESLDS ISEVDMDFTM TLYLRHYWKD ERLSFPSTKN LSMTFDGRLV BACU016932/1-428 VDVQVESLDS ISEVDMDFTM TLYLRHYWKD ERLSFPSTKN LSMTFDGRLV 151 200 ENSP00000412673/1-479 KKIWVPDMFF VHSKRSFIHD TTTDNVMLRV QPDGKVLYSL RVTVTAMCNM ENSTTRP00000003457/1-462 KKIWVPDMFF VHSKRSFIHD TTTDNVMLRV QPDGKVLYSL RVTVTAMCNM ENSBTAP00000015496/1-422 KKIWVPDMFF VHSKRSFIHD TTTDNVMLRV QPDGKVLYSL RVTVTAMCNM bmy_17633T0/1-405 KKIWVPDMFF VHSKRSFIHD TTTDNVMLRV QPDGKVLYSL RVTVTAMCNM BACU016932/1-428 KKIWVPDMFF VHSKRSFIHD TTTDNVMLRV QPDGKVLYSL RVTVTAMCNM 201 250 ENSP00000412673/1-479 DFSRFPLDTQ TCSLEIESYA YTEDDLMLYW KKGNDSLKTD ERISLSQFLI ENSTTRP00000003457/1-462 DFSRFPLDTQ TCSLEIESYA YTEDDLMLYW KKGNDSLKTD ERISLSQFLI ENSBTAP00000015496/1-422 DFSRFPLDTQ TCSLEIESYA YTEDDLMLYW KKGNDSLKTD ERISLSQFLI bmy_17633T0/1-405 DFSRFPLDTQ TCSLEIESYA YTEDDLMLYW KKGNDSLKTD ERISLSQFLI BACU016932/1-428 DFSRFPLDTQ TCSLEIESYA YTEDDLMLYW KKGNDSLKTD ERISLSQFLI 251 300 ENSP00000412673/1-479 QEFHTTTKLA FYSSTGWYNR LYINFTLRRH IFFFLLQTYF PATLMVMLSW ENSTTRP00000003457/1-462 QEFHTTTKLA FYSST-WY-R LYI-LTLRR- ---ISLCTYF PATLMVMLSW ENSBTAP00000015496/1-422 QEFHTTTKLA FYSSTGWYNR LYINFTLRRH IFFFLLQTYF PATLMVMLSW bmy_17633T0/1-405 QEFHTTTKLA FYSSTGWYNR LYINFTLRRH IFFFLLQTYF PATLMVMLSW BACU016932/1-428 QEFHTTTKLA FYSSTGWYNR LYINFTLRRH IFFFLLQTYF PATLMVMLSW 301 350 ENSP00000412673/1-479 VSFWIDRRAV PARVPLGITT VLTMSTIITG VNASMPRVSY IKAVDIYLWV ENSTTRP00000003457/1-462 VSFWIDRRAV PARVPLGITT VLTMSIIITG VNASMPRVSY IKAVDIYLWV ENSBTAP00000015496/1-422 VSFWIDRRAV PARVPLGITT VLTMSTIITG VNASMPRVSY IKAVDIYLWV bmy_17633T0/1-405 VSFWIDRRAV PARVPL---- ---------- ---------- --AVDIYLWV BACU016932/1-428 VSFWIDRRAV PARVPLGITT VLTMSTIITG VNASMPRVSY IKAVDIYLWV 351 400 ENSP00000412673/1-479 SFVFVFLSVL EYAAVNYLTT VQERKEQKLR EKLPCTSGLP PPRTAMLDGN ENSTTRP00000003457/1-462 SFVFVFLSVL EYAAVNYLTT VQERKERKPQ EKLPCTCGLP QPHAVLLDGS ENSBTAP00000015496/1-422 SFVFVFLSVL EYAAVNYLTT VQERKERKPQ EKLPCTCGLP QPRAVLLDGS bmy_17633T0/1-405 SFVFVFLSVL EYAAVNYLTT VQERKERKPQ EKLPCTCGLP QPRAVLLDGS BACU016932/1-428 SFVFVFLSVL EYAAVNYLTT VQER---KPQ EKLPCTCGLP QPRAVLLDGS 401 450 ENSP00000412673/1-479 YSDGEVNDLD NYMPENGEKP DRMMVQLTLA SERSSPQRKS QRSSYVSMRI ENSTTRP00000003457/1-462 YSDGEVNDLG NYTPENGDKP DRMMVQLTLA SDRSSPQRKS QRSSYVSMKI ENSBTAP00000015496/1-422 YSDGEVNDLG NYTPENGDKP DRMMVQLTLA SERSSPQRKS QRSSYVSMRI bmy_17633T0/1-405 YSDGEVNDLG NYTTDNGDKP DRMMVQLTLA SERSSPQRKS QRSSYVSMKI BACU016932/1-428 YSDGEVNDLG NYTTDNGDKP DRMMVQLTLA SERSSPQRKS QRSSYVSMKI 451 500 ENSP00000412673/1-479 DTHAIDKYSR IIFPAAYILF NLIYWSIFS ENSTTRP00000003457/1-462 DTHAIDKYSR IIFPAAYILF NLIYWSIFS ENSBTAP00000015496/1-422 DTHAIDKYSR IIFPAAYILF NLIYWSIFS bmy_17633T0/1-405 DTHAIDKYSR IIFPAAYILF NLIYWSIFS BACU016932/1-428 DTHAIDKYSR IIFPAAYILF NLIYWSIFS