KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:14 2014 Check: 00 .. Name: ENSTTRP00000011480/1-400 Len: 401 Check: 8014 Weight: 1.00 Name: ENSP00000356070/1-400 Len: 401 Check: 5310 Weight: 1.00 Name: ENSBTAP00000015530/1-388 Len: 401 Check: 1216 Weight: 1.00 Name: bmy_02366T0/1-307 Len: 401 Check: 2454 Weight: 1.00 Name: BACU003791/1-307 Len: 401 Check: 2454 Weight: 1.00 // 1 50 ENSTTRP00000011480/1-400 MLSNSLFPSP PPPFPNPPPP PQPPAPAQPH PPAQPPPQPP QQFPQFHVKS ENSP00000356070/1-400 MLSNSQGQSP PVPFPAPAPP PQPPTPALPH PPAQPPPPPP QQFPQFHVKS ENSBTAP00000015530/1-388 PFKASPAHTP TPPGPTPXPP A--------- ----PAQPPP PQFPQFHVRS bmy_02366T0/1-307 ---------- ---------- ---------- ---------- ---------- BACU003791/1-307 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011480/1-400 SLQIKKNAII DDYKVTTQVL GLGINGKVLQ IFNKRTQEKF ALKMLQDCPK ENSP00000356070/1-400 GLQIKKNAII DDYKVTSQVL GLGINGKVLQ IFNKRTQEKF ALKMLQDCPK ENSBTAP00000015530/1-388 SLQIKKNAII DDYKVTTQVL GLGINGKVLQ IFSKRTQEKF ALKMLQDCPK bmy_02366T0/1-307 ---------- ---------- ---------- ---------- ---MLQDCPK BACU003791/1-307 ---------- ---------- ---------- ---------- ---MLQDCPK 101 150 ENSTTRP00000011480/1-400 ARREVELHWR ASQCPHIVRI VDVYENLYAG RKCLLIVMEC LDGGELFSRI ENSP00000356070/1-400 ARREVELHWR ASQCPHIVRI VDVYENLYAG RKCLLIVMEC LDGGELFSRI ENSBTAP00000015530/1-388 ARREVELHWR ASQCPHIVRI VDVYENLYAG RKCLLIVMEC LDGGELFSRI bmy_02366T0/1-307 ARREVELHWR ASQCPHIVRI VDVYENLYAG RKCLLIVMEC LDGGELFSRI BACU003791/1-307 ARREVELHWR ASQCPHIVRI VDVYENLYAG RKCLLIVMEC LDGGELFSRI 151 200 ENSTTRP00000011480/1-400 QDRGDQAFTE RXXXXXXXXX XXXXXXXXXX XXXXXXXXPE NLLYTSKRPN ENSP00000356070/1-400 QDRGDQAFTE REASEIMKSI GEAIQYLHSI NIAHRDVKPE NLLYTSKRPN ENSBTAP00000015530/1-388 QDRGDQAFTE REASEIMKSI GEAIQYLHSI NIAHRDVKPE NLLYTSKRPN bmy_02366T0/1-307 QDRGDQAFTE REASEIMKSI GEAIQYLHSI NIAHRDVKPE NLLYTSKRPN BACU003791/1-307 QDRGDQAFTE REASEIMKSI GEAIQYLHSI NIAHRDVKPE NLLYTSKRPN 201 250 ENSTTRP00000011480/1-400 AILKLTDFGF AKETTSHNSL TTPCYTPYYV APEVLGPEKY DKSCDMWSLG ENSP00000356070/1-400 AILKLTDFGF AKETTSHNSL TTPCYTPYYV APEVLGPEKY DKSCDMWSLG ENSBTAP00000015530/1-388 AILKLTDFGF AKETTSHNSL TTPCYTPYYV APEVLGPEKY DKSCDMWSLG bmy_02366T0/1-307 AILKLTDFGF AKETTSHNSL TTPCYTPYYV APEVLGPEKY DKSCDMWSLG BACU003791/1-307 AILKLTDFGF AKETTSHNSL TTPCYTPYYV APEVLGPEKY DKSCDMWSLG 251 300 ENSTTRP00000011480/1-400 VIMYILLCGY PPFYSNHGLA ISPGMKSRIR MGQYEFPNPE WSEVSEE-VK ENSP00000356070/1-400 VIMYILLCGY PPFYSNHGLA ISPGMKTRIR MGQYEFPNPE WSEVSEE-VK ENSBTAP00000015530/1-388 VIMYILLCGY PPFYSNHGLA ISPGMKSRIR MGQYEFPNPE WSEVSEEAVK bmy_02366T0/1-307 VIMYILLCGY PPFYSNHGLA ISPGMKSRIR MGQYEFPNPE WSEVSEE-VK BACU003791/1-307 VIMYILLCGY PPFYSNHGLA ISPGMKSRIR MGQYEFPNPE WSEVSEE-VK 301 350 ENSTTRP00000011480/1-400 MLIRNLLKTE PTQRMTITEF MNHPWIMQST KVPQTPLHTS RVLKEDKERW ENSP00000356070/1-400 MLIRNLLKTE PTQRMTITEF MNHPWIMQST KVPQTPLHTS RVLKEDKERW ENSBTAP00000015530/1-388 MLIRNLLKTE PTQRMTITEF MNHPWIMQST KVPQTPLHTS RVLKEDKERW bmy_02366T0/1-307 MLIRNLLKTE PTQRMTITEF MNHPWIMQST KVPQTPLHTS RVLKEDKERW BACU003791/1-307 MLIRNLLKTE PTQRMTITEF MNHPWIMQST KVPQTPLHTS RVLKEDKERW 351 400 ENSTTRP00000011480/1-400 EDVKXXXXXX XXXXXXXYEQ IKIKKIEDAS NPLLLKRRKK ARALEAAALA ENSP00000356070/1-400 EDVKEEMTSA LATMRVDYEQ IKIKKIEDAS NPLLLKRRKK ARALEAAALA ENSBTAP00000015530/1-388 EDVKEEMTSA LATMRVDYEQ IKIKKIEDAS NPLLLKRRKK ARALEAAALA bmy_02366T0/1-307 EDVKEEMTSA LATMRVDYEQ IKIKKIEDAS NPLLLKRRKK ARALEAAALA BACU003791/1-307 EDVKEEMTSA LATMRVDYEQ IKIKKIEDAS NPLLLKRRKK ARALEAAALA 401 450 ENSTTRP00000011480/1-400 H ENSP00000356070/1-400 H ENSBTAP00000015530/1-388 H bmy_02366T0/1-307 H BACU003791/1-307 H