KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:17 2014 Check: 00 .. Name: BACU012247/1-85 Len: 446 Check: 9709 Weight: 1.00 Name: ENSP00000359899/1-444 Len: 446 Check: 2070 Weight: 1.00 Name: ENSBTAP00000015561/1-444 Len: 446 Check: 781 Weight: 1.00 Name: bmy_17913T0/1-360 Len: 446 Check: 2809 Weight: 1.00 Name: ENSTTRP00000000703/1-445 Len: 446 Check: 3341 Weight: 1.00 // 1 50 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 MSGTKLEDSP PCRNWSSASE LNETQEPFLN PTDYDDEEFL RYLWREYLHP ENSBTAP00000015561/1-444 MSGTKLEDSP PCRNWSSAPE LNETQEPFLN PTDYDDEEFL RYLWREYLHP bmy_17913T0/1-360 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000703/1-445 MSGTKLEDSP PCHNWSSAPE LNATQEPFLN PTDYDDEEFL RYLWREYLHP 51 100 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 KEYEWVLIAG YIIVFVVA-L IGNVLVCVAV WKNHHMRTVT NYFIVNLSLA ENSBTAP00000015561/1-444 KEYEWVLIAG YIIVFVVA-L IGNVLVCVAV WKNHHMRTVT NYFIVNLSLA bmy_17913T0/1-360 ---------- ---------- ---------- -----MRTVT NYFIVNLSLA ENSTTRP00000000703/1-445 KEYEWVLIAG YIIVFVVATY IGNVLVCVAV WKNHHMRTVT NYFIVNLSLA 101 150 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 DVLVTITCLP ATLVVDITET WFFGQSLCKV IPYLQTVSVS VSVLTLSCIA ENSBTAP00000015561/1-444 DVLVTITCLP ATLVVDITET WFFGQSLCKV IPYLQTVSVS VSVLTLSCIA bmy_17913T0/1-360 DVLVTITCLP ATLVVDITET WFFGQSLCKV IPYLQTVSVS VSVLTLSCIA ENSTTRP00000000703/1-445 DVLVTITCLP ATLVVDITET WFFGQSLCKV IPYLQTVSVS VSVLTLSCIA 151 200 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 LDRWYAICHP LMFKSTAKRA RNSIVIIWIV SCIIMIPQAI VMECSTVFPG ENSBTAP00000015561/1-444 LDRWYAICHP LMFKSTAKRA RNSIVIIWIV SCVIMIPQAI VMECSTMLPG bmy_17913T0/1-360 LDRWYAICHP LMFKSTAKRA RNSIVIIWIV SCIIMIPQAI VMECSTMLPG ENSTTRP00000000703/1-445 LDRWYAICHP LMFKSTAKRA RNSIVIIWIV SCIIMIPQAI VMECSTMLPG 201 250 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 LANKTTLFTV CDERWGGEIY PKMYHICFFL VTYMAPLCLM VLAYLQIFRK ENSBTAP00000015561/1-444 LANKTALFTV CDERWGGEIY PKMYHICFFL VTYMAPLCLM VLAYLQIFRK bmy_17913T0/1-360 LANKTTLFTV CDEHWGGEIY PKMYHICFFL VTYMAPLCLM VLAYLQIFRK ENSTTRP00000000703/1-445 LANKTTLFTV CDEHWGGEIY PKMYHICFFL VTYMAPLCLM VLAYLQIFRK 251 300 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 LWCRQIPGTS SVVQRKWKPL QPVSQPRGPG QPTKSRMSAV AAEIKQIRAR ENSBTAP00000015561/1-444 LWCRQIPGTS SVVQRKWKAL QPLSQPRGPG QQTKSRISAV AAEIKQIRAR bmy_17913T0/1-360 LWCRQIPGTS SVVQRKWKAL QPLSQPRGPG QQTKSRISAV AAEIKQIRAR ENSTTRP00000000703/1-445 LWCRQIPGTS SVVQRKWKAL QPLSQPRGPG QQTKSRISAV AAEIKQIRAR 301 350 BACU012247/1-85 ---------- ---------- ---------- ---------- ---------- ENSP00000359899/1-444 RKTARMLMIV LLVFAICYLP ISILNVLKRV FGMFAHTEDR ETVYAWFTFS ENSBTAP00000015561/1-444 RKTARMLMVV LLVFAICYLP ISILNVLKRV FGMFTHTEDR ETVYAWFTFA bmy_17913T0/1-360 RKTARMLMVV LLVFAICYLP ISILNVLKRV FGMFTHTEDR ETVYAWFTFS ENSTTRP00000000703/1-445 RKTARMLMVV LLVFAICYLP ISILNVLKRV FGMFTHTEDR ETVYAWFTFS 351 400 BACU012247/1-85 ---------- -PFILTGLTG KFREEFKAAF SCCCLGVHHR QEDPLARGRT ENSP00000359899/1-444 HWLVYANSAA NPIIYNFLSG KFREEFKAAF SCCCLGVHHR QEDRLTRGRT ENSBTAP00000015561/1-444 HWLVYANSAA NPIIYNFLSG KFREEFKAAF SCCCLGVHHR QEDRLARGRT bmy_17913T0/1-360 HWLVYANSAA NPIIYNFLSG KFREEFKAAF SCCCLGVHHR QEDPLARGRT ENSTTRP00000000703/1-445 HWLVYANSAA NPIIYNFLSG KFREEFKAAF SCCCLGVHHR QEDPLARGRT 401 450 BACU012247/1-85 STESRKSLTT QISNIDNISK LSEQVVLTSI STLPAAANGA GTLQNW ENSP00000359899/1-444 STESRKSLTT QISNFDNISK LSEQVVLTSI STLP-AANGA GPLQNW ENSBTAP00000015561/1-444 STESRKSLTT QISNFDNVSK LSEQVVLTSI STLP-AANGA GPLQNW bmy_17913T0/1-360 STESRKSLTT QISNTDNISK LSEQVVLTSI STLP-AANGA GPLQNW ENSTTRP00000000703/1-445 STESRKSLTT QISNIDNISK LSEQVVLTSV STLP-AANGA GPLQNW