KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:19 2014 Check: 00 .. Name: ENSTTRP00000007883/1-968 Len: 1038 Check: 8302 Weight: 1.00 Name: BACU018222/1-833 Len: 1038 Check: 3610 Weight: 1.00 Name: ENSBTAP00000015567/1-972 Len: 1038 Check: 6307 Weight: 1.00 Name: bmy_17414T0/1-545 Len: 1038 Check: 7296 Weight: 1.00 Name: ENSP00000262895/1-980 Len: 1038 Check: 9163 Weight: 1.00 // 1 50 ENSTTRP00000007883/1-968 ---------- ---------- ---------- ---------- --------MP BACU018222/1-833 ---------- ---------- ---------- ---------- --------MP ENSBTAP00000015567/1-972 ---------- ---------- ---------- ---------- --------MP bmy_17414T0/1-545 PRPSHTAQRQ SISPLSFLGP RGSPALRPTR IRGEWGPRQL RPHEEGRKMP ENSP00000262895/1-980 ---------- ---------- ---------- ---------- --------MP 51 100 ENSTTRP00000007883/1-968 AELLLLLIVA FASPSCQVLS SLRMAAILNN QTVCGRGERX XXXXXXXXXX BACU018222/1-833 AELLLLLIVA FASPSCQVLS SLRMAAILDD QTVCGRGERL ALALAREQIN ENSBTAP00000015567/1-972 AELLLLLIVA FASPSRQVLS SLRMAAILDD QTVCGRGERL ALALAREQIN bmy_17414T0/1-545 AELLLLLIVA FASPSCQVLS SLRMAAILDD QTVCGRGERL ALALAREQIN ENSP00000262895/1-980 AELLLLLIVA FASPSCQVLS SLRMAAILDD QTVCGRGERL ALALAREQIN 101 150 ENSTTRP00000007883/1-968 XXXXXXXXXX XXXXXXXXQR DSQYETTDTM CQILPKGVVS VLGPSSSPAS BACU018222/1-833 GIIEVPAKAR VEVDIFELQR DSQYETTDTM CQILPKGVVS VLGPSSSPAS ENSBTAP00000015567/1-972 GIIEVPAKAR VEVDIFELQR DSQYETTDTM CQILPKGVVS VLGPSSSPAS bmy_17414T0/1-545 GIIEVPAKAR VEVDIFELQR DSQYETTDTM CQILPKGVVS VLGPSSSPAS ENSP00000262895/1-980 GIIEVPAKAR VEVDIFELQR DSQYETTDTM CQILPKGVVS VLGPSSSPAS 151 200 ENSTTRP00000007883/1-968 ASTVSHICGE KEIPHVKVGP EEMPRLQYLR FASVSLYPSN EDVSLAVSRI BACU018222/1-833 ASTVSHICGE KEIPHVKVGP EEMPRLQYLR FASVSLYPSN EDVSLAVSRI ENSBTAP00000015567/1-972 ASTVSHICGE KEIPHIKVGP EETPRLQYLR FASVSLYPSN EDVSLAVSRI bmy_17414T0/1-545 ASTVSHICGE KEIPHVKVGP EEMPRLQYLR FASVSLYPSN EDVSLAVSRI ENSP00000262895/1-980 ASTVSHICGE KEIPHIKVGP EETPRLQYLR FASVSLYPSN EDVSLAVSRI 201 250 ENSTTRP00000007883/1-968 LKSFNYPSAS LICAKAECLL RLEELVRGFL ISKETLSVRM LDDSRDPTPL BACU018222/1-833 LKSFNYPSAS LICAKAECLL RLEELVRGFL ISKETLSVRM LDDSRDPTPL ENSBTAP00000015567/1-972 LKSFNYPSAS LICAKAECLL RLEELVRGFL ISKETLSVRM LDDSRDPTPL bmy_17414T0/1-545 LKSFNYPSAS LICAKAECLL RLEELVRGFL ISKDTLSVRM LDDSRDPTPL ENSP00000262895/1-980 LKSFNYPSAS LICAKAECLL RLEELVRGFL ISKETLSVRM LDDSRDPTPL 251 300 ENSTTRP00000007883/1-968 LKEIRDDKVS TIIIDANASI SHLILRKASE LGMTSAFYKY ILTTMDFPIL BACU018222/1-833 LKEIRDDKVS TIIIDANASI SHLILLKASE LGMTSAFYKY ILTTMDFPIL ENSBTAP00000015567/1-972 LKEIRDDKVS TIIIDANASI SHLILRKASE LGMTSAFYKY ILTTMDFPIL bmy_17414T0/1-545 LKEIRDDKVS TIIIDANASI SHLILRKASE LGMTSAFYKY ILTTMDFPIL ENSP00000262895/1-980 LKEIRDDKVS TIIIDANASI SHLILRKASE LGMTSAFYKY ILTTMDFPIL 301 350 ENSTTRP00000007883/1-968 HLDGIVEDSS NI-GFSMFNT SHPFYPEFVR SLNMS-RENC EASTYPGPAL BACU018222/1-833 HLDGIVEDSS NILGFSMFNT SHPFYPEFVR SLNMSWRENC EASTYPGPAV ENSBTAP00000015567/1-972 HLDGVVEDSS NILGFSMFNT SHPFYPEFVR SLNMSWRENC EASTYPGPAL bmy_17414T0/1-545 HLDGIVEDSS NILGFSMFNT SHPFYPEFVR SLNMSWRENC EASTYPGPAL ENSP00000262895/1-980 HLDGIVEDSS NILGFSMFNT SHPFYPEFVR SLNMSWRENC EASTYLGPAL 351 400 ENSTTRP00000007883/1-968 SA--ALMFDA VHVVVSAVRE LNRSQEIGVK PLACTSANIW SHGTSLM-YL BACU018222/1-833 SSHPCSRHTG TQTLPGPLQA LAGCAQNPPV PH-SLSENI- -HEASQCG-- ENSBTAP00000015567/1-972 SA--ALMFDA VHVVVSAVRE LNRSQEIGVK PLACTSANIW PHGTSLMNYL bmy_17414T0/1-545 SA--ALMFDA VHVVVSAVRE LNRSQEIGVK PLACTSANIW PHGTSLMNYL ENSP00000262895/1-980 SA--ALMFDA VHVVVSAVRE LNRSQEIGVK PLACTSANIW PHGTSLMNYL 401 450 ENSTTRP00000007883/1-968 RXXXXX-XXX XXXXXXXXXX XXXXXXXXXX XXXXXXXIG- WYSNRTLAMN BACU018222/1-833 PELKYDGLTG RVEFNSKGQR TNYTLRILEK SRQGHREIGV WYSNRTLAMN ENSBTAP00000015567/1-972 RMVEYDGLTG RVEFNSKGQR TNYTLRILEK SRQGHREIGV WYSNRTLAMN bmy_17414T0/1-545 RMVEYDGLTG RVEFNSKGQR TNYTLRILEK SRQGHREIGV WYSNRTLAMN ENSP00000262895/1-980 RMVEYDGLTG RVEFNSKGQR TNYTLRILEK SRQGHREIGV WYSNRTLAMN 451 500 ENSTTRP00000007883/1-968 ATTLDINLSQ TLANKTLVVT TIL-ENPYVM RRPNFQALSG NERFEGFCVD BACU018222/1-833 ATTLDINLSQ TLANKTLVVT TILVSGPCGD RRPEVHSWSR SP--GSFCCP ENSBTAP00000015567/1-972 ATTLDINLSQ TLANKTLVVT TIL-ENPYVM RRPNFQALSG NERFEGFCVD bmy_17414T0/1-545 ATTLDINLSQ TLANKTLVVT TIL-ENPYVM RRPNFQALSG NERFEGFCVD ENSP00000262895/1-980 ATTLDINLSQ TLANKTLVVT TIL-ENPYVM RRPNFQALSG NERFEGFCVD 501 550 ENSTTRP00000007883/1-968 MLRELAELLR FRYRLRLVED GLYGAPEPNG SWTGMVGELI NR-KADLAVA BACU018222/1-833 LSLPLSQLL- --YSKSLPQC VLSNCPSVSL ARPSAPGPLP LQQKADLAVA ENSBTAP00000015567/1-972 MLRELAELLR FRYRLRLVED GLYGAPEPNG SWTGMVGELI NRQKADLAVA bmy_17414T0/1-545 MLRELAELLR FRYRLRLVED GLYGAPEPNG SWTGMVGELI NR-------- ENSP00000262895/1-980 MLRELAELLR FRYRLRLVED GLYGAPEPNG SWTGMVGELI NR-KADLAVA 551 600 ENSTTRP00000007883/1-968 AFTITAEREK VIDFSKPFMT LGISILYRVH MGRKPGYFSF LDPFSPAVWL BACU018222/1-833 AFTITAEREK VIDFSKPFMT LGISILYRVH MGRKPGYFSF LDPFSPAVWL ENSBTAP00000015567/1-972 AFTITAEREK VIDFSKPFMT LGISILYRVH MGRKPGYFSF LDPFSPAVWL bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 AFTITAEREK VIDFSKPFMT LGISILYRVH MGRKPGYFSF LDPFSPAVWL 601 650 ENSTTRP00000007883/1-968 FMLLAYLAVS CVLFLAARLS PYEWYNPHPC LRARPHILEN QYTLGNSLWF BACU018222/1-833 FMLLAYLAVS CVLFLAARLS PYEWYNPHPC LRARPHILEN QYTLGNSLWF ENSBTAP00000015567/1-972 FMLLAYLAVS CVLFLAARLS PYEWYNPHPC LRARPHILEN QYTLGNSLWF bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 FMLLAYLAVS CVLFLAARLS PYEWYNPHPC LRARPHILEN QYTLGNSLWF 651 700 ENSTTRP00000007883/1-968 PVGGFMQQGS EIMPRALSTR CVSGVXXXXX XXXXXXXXXX XXXXXXXXXX BACU018222/1-833 PVGGFMQQGS EIMPRALSTR CVSGVWWAFT LIIISSYTAN LAAFLTVQRM ENSBTAP00000015567/1-972 PVGGFMQQGS EIMPRALSTR CVSGVWWAFT LIIISSYTAN LAAFLTVQRM bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 PVGGFMQQGS EIMPRALSTR CVSGVWWAFT LIIISSYTAN LAAFLTVQRM 701 750 ENSTTRP00000007883/1-968 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XNSRYQTYQR MWNYMQSKQP BACU018222/1-833 EVPVESADDL ADQTNIEYGT IHAGSTMTFF QNSRYQTYQR MWNYMQSKQP ENSBTAP00000015567/1-972 EVPVESADDL ADQTNIEYGT IHAGSTMTFF QNSRYQTYQR MWNYMQSKQP bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 EVPVESADDL ADQTNIEYGT IHAGSTMTFF QNSRYQTYQR MWNYMQSKQP 751 800 ENSTTRP00000007883/1-968 SVFVKSTEEG IARVLNSRYA FLLESTMNEY HRRLNCNLTQ IGGLLDTKGY BACU018222/1-833 SVFVKSTEEG IARVLNSRYA FLLESTMNEY HRRLNCNLTQ IGGLLDTKGY ENSBTAP00000015567/1-972 SVFVKSTEEG IARVLNSRYA FLLESTMNEY HRRLNCNLTQ IGGLLDTKGY bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 SVFVKSTEEG IARVLNSRYA FLLESTMNEY HRRLNCNLTQ IGGLLDTKGY 801 850 ENSTTRP00000007883/1-968 GIGMPLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU018222/1-833 GIGMPLGSPF RDEITLAILQ LQENNRLEIL KRKWWEGSRC PKEEDHRAKG ENSBTAP00000015567/1-972 GIGMPLGSPP RPITTLALVS GTWNHHLEIL KRKWWEGGRC PKEEDHRAKG bmy_17414T0/1-545 ---------- ---------- ---------V RRGWG----- ---------- ENSP00000262895/1-980 GIGMPLGSPF RDEITLAILQ LQENNRLEIL KRKWWEGGRC PKEEDHRAKG 851 900 ENSTTRP00000007883/1-968 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX APPLHPPTLM BACU018222/1-833 LGMENIGGIF VVLICGLIIA VFVAVMEFVW STRRSAESEE V--------- ENSBTAP00000015567/1-972 LGMENIGGIF VVLICGLIIA VFVAVMEFIW STRRSAESEE V------SVC bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 LGMENIGGIF IVLICGLIIA VFVAVMEFIW STRRSAESEE V------SVC 901 950 ENSTTRP00000007883/1-968 LSPLAPLVTL DESTLLAKFS ACALSAFPRT FLLFSPSLRH HQLFS--FYW BACU018222/1-833 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015567/1-972 QEMLQELRHA VSCRKTSRSR RRRRPGGPSR ALLSLRAVRE MRLSNGKLYS bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 QEMLQELRHA VSCRKTSRSR RRRRPGGPSR ALLSLRAVRE MRLSNGKLYS 951 1000 ENSTTRP00000007883/1-968 IKPGSIQMCC HFSHLEPSLD PVSPPGHHPI SPLVVALTVC PSAVSSF--- BACU018222/1-833 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015567/1-972 VCADA----- -GSAHRLLDD PGPPGGARPP GPH-CTHVRV CQECRRIQAL bmy_17414T0/1-545 ---------- ---------- ---------- ---------- ---------- ENSP00000262895/1-980 AGAGGDAGSA HGGPQRLLDD PGPPSGARPA APTPCTHVRV CQECRRIQAL 1001 1050 ENSTTRP00000007883/1-968 ------CPPI PSWTLPSSSC PHLSSEANLA TSDLRI-- BACU018222/1-833 ---------- ---------- ---------- -------- ENSBTAP00000015567/1-972 RASGAGAPPR GLGAPAEATS PPRPRP--AG PRELAEHE bmy_17414T0/1-545 ---------- ---------- ---------- -------- ENSP00000262895/1-980 RASGAGAPPR GLGVPAEATS PPRPRPGPAG PRELAEHE