KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:21 2014 Check: 00 .. Name: ENSP00000359795/1-315 Len: 315 Check: 2245 Weight: 1.00 Name: bmy_13217T0/1-264 Len: 315 Check: 8994 Weight: 1.00 Name: ENSTTRP00000014572/1-312 Len: 315 Check: 4835 Weight: 1.00 Name: ENSBTAP00000015583/1-313 Len: 315 Check: 9248 Weight: 1.00 Name: BACU014794/1-313 Len: 315 Check: 1480 Weight: 1.00 // 1 50 ENSP00000359795/1-315 MPLKLRGKKK AKSKETAGLV EGEPTGAGGG SLSASRAPAR RLVFHAQLAH bmy_13217T0/1-264 MPLGLRRKKK FNTKETSRLV EGERTRAAGG SLPSLPAPTC RLVFHTQLAH ENSTTRP00000014572/1-312 MPLRLRRKKK FNTKETSRLV EGEQTNAAGG SLPASR-PTC RLVFHTQLAH ENSBTAP00000015583/1-313 MPLGLRRKKK FNTKETSRLV EGEHTDAAVR SLPSPPAPAR RLVFHTQLAH BACU014794/1-313 MPLGLRRKKK FTTKETSRLV EGEQTNVAGA SLPSLPAPTC KLVFHTQLAH 51 100 ENSP00000359795/1-315 GSATGRVEGF SSIQELYAQI AGAFEISPSE ILYCTLNTPK IDMERLLGGQ bmy_13217T0/1-264 GSATGRVENF SSIQELYAKI AGVFEISPSE ILYCTLNTPK VDMGKLLGAQ ENSTTRP00000014572/1-312 GSATGRVENF SSIQELYAKI ASVFEISPSE ILYCTLNTPK VDMGKLLGAQ ENSBTAP00000015583/1-313 GSATGRVENF SSIQELYAKI AGVFEIPPSE ILYCTLNTPK VDMGKLLGAQ BACU014794/1-313 GSATGRVENF SSIQELYAKI AGVFEISPSE ILYCTLNTPK VDMGKLLGAQ 101 150 ENSP00000359795/1-315 LGLEDFIFAH VKGIEKEVNV YKSEDSLGLT ITDNGVGYAF IKRIKDGGVI bmy_13217T0/1-264 IGLEDFIFAH VKGIKKEVNV YKSEDSLGLT ITDNGAGYAF IKRIKDGSIV ENSTTRP00000014572/1-312 IGLEDFIFAH VKGIKKEVNV YKSEDSLGLT ITDNGAGYAF IKRIKDGSII ENSBTAP00000015583/1-313 IGLEDFIFAH IKGIKKEVNV YKSEDSLGLT ITDNGAGYAF IKRIKDDSII BACU014794/1-313 IGLEDFIFAH VKGIKKEVNV YKSEDSLGLT ITDNGAGYAF IKRIKDGSIV 151 200 ENSP00000359795/1-315 DSVKTICVGD HIESINGENI VGWRHYDVAK KLKELKKEEL FTMKLIEPKK bmy_13217T0/1-264 DSVKTXCVGD HIEAINGETI VGWRHFDVAK KLKELKKEEL FTLKLIEPKK ENSTTRP00000014572/1-312 DSVKTICVGD HIEAINGETI LGWRHFDVAK KLKELKKEEL FTLKLIEPKK ENSBTAP00000015583/1-313 DSVKTICVGD HIEAINGENI VGWRHFDVAK KLKELKKEEL FTLTLIEPKK BACU014794/1-313 DSVKTICVGD HIEAINGETI VGWRHFDVAK KLKELKKEEL FTLKLIEPKR 201 250 ENSP00000359795/1-315 AFEIELRSKA GKSSGEKIGC GRATLRLRSK GPATVEEMPS ETKAKAIEKI bmy_13217T0/1-264 AFGQLMTMMG ECSGSGQLPF PTLSKKLLVH LNLDV-RLPS ETKAKAIEKV ENSTTRP00000014572/1-312 AFDMEPRAKA GKSSTGRIGT GRETLRLRSK GPATVEEVPS ETKAKSIGKV ENSBTAP00000015583/1-313 AFDMEPRSKA GKSSTGKIGT GRETLRLRSK GPATVEEVPS EAKEKAIGKV BACU014794/1-313 AFDMEPRSKA GKSSTGRIGT GRETLRLRSK GPATVEEVPS ETKAKAIEKV 251 300 ENSP00000359795/1-315 DDVLELYMGI RDIDLATTMF EAGKDKVNPD EFAVALDETL GDFAFPDEFV bmy_13217T0/1-264 DDLLELYMGI RDIDL----- ---------- ---------- ---------- ENSTTRP00000014572/1-312 DDLLELYMGI XXXXXXXXXX XXXKDKGNPD EFAVAPCETL GDFAFPDEFV ENSBTAP00000015583/1-313 DDLLELYMGI RDTDLATTMF EAGKDKGNPD EFAVALDETL GDFAFPDEFV BACU014794/1-313 DDLLELYMGI RDIDLATTMF EAGKDKGNPD KFAVALDETL GDFAFPDEFV 301 350 ENSP00000359795/1-315 FDVWGVIGDA KRRGL bmy_13217T0/1-264 ---------- ----- ENSTTRP00000014572/1-312 FDVWGVIGDA KGL-- ENSBTAP00000015583/1-313 FDVWGVIGDA KQE-- BACU014794/1-313 FDVWRVIGDA KQG--