KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:22 2014 Check: 00 .. Name: ENSTTRP00000006811/1-577 Len: 638 Check: 1298 Weight: 1.00 Name: ENSBTAP00000015586/1-577 Len: 638 Check: 9540 Weight: 1.00 Name: bmy_09793T0/1-502 Len: 638 Check: 9902 Weight: 1.00 Name: ENSP00000290341/1-577 Len: 638 Check: 8939 Weight: 1.00 Name: BACU006406/1-523 Len: 638 Check: 4247 Weight: 1.00 // 1 50 ENSTTRP00000006811/1-577 MNKLYIGNLN ESVTPADLEK VFAEHKISYS GQFLVKSGYA FVDCPDEHWA ENSBTAP00000015586/1-577 MNKLYIGNLN ESVTPADLEK VFAEHKISYS GQFLVKSGYA FVDCPDEHWA bmy_09793T0/1-502 ---------- ---------- ---------- ---------- ---------- ENSP00000290341/1-577 MNKLYIGNLN ESVTPADLEK VFAEHKISYS GQFLVKSGYA FVDCPDEHWA BACU006406/1-523 MNKLYIGNLN ESVTPADLEK VFAEHKISYS GQFLVKSGYA FVDCPDEHWA 51 100 ENSTTRP00000006811/1-577 MKAIETFSGK VXXXXXXXXX XXXXXXXXXS RKIQIRNIPP QLRWEVLDSL ENSBTAP00000015586/1-577 MKAIETFSGK VELQGKRLEI EHSVPKKQRS RKIQIRNIPP QLRWEVLDSL bmy_09793T0/1-502 ---------- ---------- ---------- ---------- ---------- ENSP00000290341/1-577 MKAIETFSGK VELQGKRLEI EHSVPKKQRS RKIQIRNIPP QLRWEVLDSL BACU006406/1-523 MKAIETFSGK VELQGKRLEI EHSVPKKQRS RKIQIRNIPP QLRWEVLDSL 101 150 ENSTTRP00000006811/1-577 LAQYGTVENC EQVNTESETA VVNVTYSNRE QTRQAIMKLN GHQLENHALK ENSBTAP00000015586/1-577 LAQYGTVENC EQVNTESETA VVNVTYSNRE QTRQAILKLN GHQLENHALK bmy_09793T0/1-502 ---------- ---------- ---------- ------MKLN GHQLENHALK ENSP00000290341/1-577 LAQYGTVENC EQVNTESETA VVNVTYSNRE QTRQAIMKLN GHQLENHALK BACU006406/1-523 LAQYGTVENC EQVNTESETA VVNVTYSNRE QTRQAIMKLN GHQLENHALK 151 200 ENSTTRP00000006811/1-577 VSYIPDEQTA QGPENGRRGG FGSRGQPRQG SPVAAGAPAK QQQVDIPLRL ENSBTAP00000015586/1-577 VSYIPDEQIT QGPENGRRGG FGSRGQPRQG SPVAAGAPAK QQQVDIPLRL bmy_09793T0/1-502 VSYIPDEQIA QGPENGRRGG FGSRGQPRQG SPVAAGAPAK QQQVDIPLRL ENSP00000290341/1-577 VSYIPDEQIA QGPENGRRGG FGSRGQPRQG SPVAAGAPAK QQQVDIPLRL BACU006406/1-523 VSYIPDEQIA QGPENGRRGG FGSRGQPRQG SPVAAGAPAK QQQVDIPLRL 201 250 ENSTTRP00000006811/1-577 LVPTQYVGAI IGKEGATIRN ITKQTQSKID VHRKENAGAA EKAISVHSTP ENSBTAP00000015586/1-577 LVPTQYVGAI IGKEGATIRN ITKQTQSKID VHRKENAGAA EKAISVHSTP bmy_09793T0/1-502 LVPTQYVGAI IGKEGATIRN ITKQTQSKID VHRKENAGAA EKAISIHSTP ENSP00000290341/1-577 LVPTQYVGAI IGKEGATIRN ITKQTQSKID VHRKENAGAA EKAISVHSTP BACU006406/1-523 LVPTQYVGAI IGKEGATIRN ITKQTQSKID VHRKENAGAA EKAISVHSTP 251 300 ENSTTRP00000006811/1-577 EGCSSACKMI LEIMHKEAKD TKTADEVPLK ILAHNNFVGR LIGKEGRNLK ENSBTAP00000015586/1-577 EGCSSACKMI LEIMHKEAKD TKTADEVPLK ILAHNNFVGR LIGKEGRNLK bmy_09793T0/1-502 EGCSSACKMI LEIMHKEAKD TKTADEVPLK ILAHNNFVGR LIGKEGRNLK ENSP00000290341/1-577 EGCSSACKMI LEIMHKEAKD TKTADEVPLK ILAHNNFVGR LIGKEGRNLK BACU006406/1-523 EGCSSACKMI LEIMHKEAKD TKTADEVPLK ILAHNNFVGR LIGKEGRNLK 301 350 ENSTTRP00000006811/1-577 KVEQDTETKI TISSLQDLTL YNPERTITVK GAIENCCRAE QEIMKKVREA ENSBTAP00000015586/1-577 KVEQDTETKI TISSLQDLTL YNPERTITVK GAIENCCRAE QEIMKKVREA bmy_09793T0/1-502 KVEQDTETKI TISSLQDLTL YNPERTITVK GAIENCCRAE QEIMKKVREA ENSP00000290341/1-577 KVEQDTETKI TISSLQDLTL YNPERTITVK GAIENCCRAE QEIMKKVREA BACU006406/1-523 KVEQDTETKI TISSLQDLTL YNPERTITVK GAIENCCRAE QEIMKKVREA 351 400 ENSTTRP00000006811/1-577 YENDVAAMSL QSHLIPGLNL AAVGLFPASS SAVPPPPSSV TGAAPYSSFM ENSBTAP00000015586/1-577 YENDVAAMSL QSHLIPGLNL AAVGLFPASS SAVPPPPSSV TGAAPYSSFM bmy_09793T0/1-502 YENDVAAMSL QSHLIPGLNL AAVGLFPASS SAVPPPPSSV TGAAPYSSFM ENSP00000290341/1-577 YENDVAAMSL QSHLIPGLNL AAVGLFPASS SAVPPPPSSV TGAAPYSSFM BACU006406/1-523 YENDVAAMSL QSHLIPGLNL AAVGLFPASS SAVPPPPSSV TGAAPYSSFM 401 450 ENSTTRP00000006811/1-577 QAPEQEMVQV FIPAQAVGAI IGKKGQHIKQ LSRFASASIK IAPPETPDSK ENSBTAP00000015586/1-577 QAPEQEMVQV FIPAQAVGAI IGKKGQHIKQ LSRFASASIK IAPPETPDSK bmy_09793T0/1-502 QAPEQEMVQV FIPAQAVGAI IGKKGQHIKQ LSRFASASIK IAPPETPDSK ENSP00000290341/1-577 QAPEQEMVQV FIPAQAVGAI IGKKGQHIKQ LSRFASASIK IAPPETPDSK BACU006406/1-523 QAPEQEMVQV FIPAQAVGAI IGKKGQHIKQ LSRFASASI- ---------- 451 500 ENSTTRP00000006811/1-577 LRMVIITGPP EAQFKAQGRI YGKLKEENFF GPKEEVKLET HIRVPASAAG ENSBTAP00000015586/1-577 VRMVIITGPP EAQFKAQGRI YGKLKEENFF GPKEEVKLET HIRVPASAAG bmy_09793T0/1-502 VRMVIITGPP EAQFKAQGRI YGKLKEENFF GPKEEVKLET HIRVPASAAG ENSP00000290341/1-577 VRMVIITGPP EAQFKAQGRI YGKLKEENFF GPKEEVKLET HIRVPASAAG BACU006406/1-523 ---------- ----KAQGRI YGKLKEENFF GPKEEVKLET HIRVPASAAG 501 550 ENSTTRP00000006811/1-577 RVIGKGGKTV NELQNLTAAE VVVPRDQTPD ENDQVIVKII GHFYASQMA- ENSBTAP00000015586/1-577 RVIGKGGKTV NELQNLTAAE VVVPRDQTPD ENDQVIVKII GHFYASQMA- bmy_09793T0/1-502 RVIGKGGKTV NELQNLTAAE VVVPRDQTPD ENDQVIVKII GHFYASQVHM ENSP00000290341/1-577 RVIGKGGKTV NELQNLTAAE VVVPRDQTPD ENDQVIVKII GHFYASQMA- BACU006406/1-523 RVIGKGGKTV NELQNLTAAE VVVPRDQTPD ENDQVIVKII GHFYASQV-- 551 600 ENSTTRP00000006811/1-577 ---------- -QRKIRDILA QVKQLHQKGQ SNQAQARRK- ---------- ENSBTAP00000015586/1-577 ---------- -QRKIRDILA QVKQLHQKGQ SNQAQARRK- ---------- bmy_09793T0/1-502 SLPHHGRAAG LQKHDRDKWL SGRYETSWPK SNSCTKRDRV TRPRPGGSDQ ENSP00000290341/1-577 ---------- -QRKIRDILA QVKQQHQKGQ SNQAQARRK- ---------- BACU006406/1-523 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000006811/1-577 ---------- ---------- ---------- -------- ENSBTAP00000015586/1-577 ---------- ---------- ---------- -------- bmy_09793T0/1-502 PLPITSAQGQ QAEIESTFSP AGLRMSGNQG HLGRDVDQ ENSP00000290341/1-577 ---------- ---------- ---------- -------- BACU006406/1-523 ---------- ---------- ---------- --------