KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:23 2014 Check: 00 .. Name: ENSP00000420525/1-801 Len: 1266 Check: 63 Weight: 1.00 Name: ENSBTAP00000015588/1-803 Len: 1266 Check: 9024 Weight: 1.00 Name: ENSTTRP00000008446/1-797 Len: 1266 Check: 2109 Weight: 1.00 Name: bmy_16117T0/1-771 Len: 1266 Check: 6565 Weight: 1.00 Name: BACU012072/1-1266 Len: 1266 Check: 56 Weight: 1.00 // 1 50 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 MSGGVYGGDE VGALVFDIGS FSVRAGYAGE DCPKADFPTT VGLLAAEEGG 51 100 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 GLELEGEKEK KGKIFHIDTN ALHVPRDGAE VMSPLKNGMI EDWECFRAIL 101 150 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 DHTYSKHVKS EPNLHPVLMS EAPWNTRAKR EKLTELMFEQ YNIPAFFLCK 151 200 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 TAVLTAFANG RSTGLVLDSG ATHTTAIPVH DGYVLQQGIV KSPLAGDFIS 201 250 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 MQCRELFQEM AIDIIPPYMI AAKEVIQDFQ ASVLQVSDSP YDEQVAAQMP 251 300 ENSP00000420525/1-801 ---------- -----MERL- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- -----MEQL- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- -----MERL- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- -----MERL- ---------- ---------- ---------- BACU012072/1-1266 TVHYEMPNGY NTDYGAERLR IPEGLFDPSN VKGLSGNTML GVGHVVTTSI 301 350 ENSP00000420525/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015588/1-803 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008446/1-797 ---------- ---------- ---------- ---------- ---------- bmy_16117T0/1-771 ---------- ---------- ---------- ---------- ---------- BACU012072/1-1266 GMCDIDIRPG LYGSVIVTGG NTLLQGFTDR LNRELSQKTP PSMRLKLIAS 351 400 ENSP00000420525/1-801 ---------- W-G--LFQRA ---------- ---QQLSPRS SQTVYQRVEG ENSBTAP00000015588/1-803 ---------- --GG-LLRRA ---------- ---QRLSPGP SQTIYKRVEG ENSTTRP00000008446/1-797 ---------- W-G--LLQRA ---------- ---QRLSPGP SQTIYKRVEG bmy_16117T0/1-771 ---------- W-G--LLQRA ASFPDFMSTT PLQQRLSPGP SQTIYKRVEG BACU012072/1-1266 NSTMERKFSP WIGGSILASL ASFPDFMSTT PLQQRLSPGP SQTIYKRVEG 401 450 ENSP00000420525/1-801 PRKGHLEEEE EDGEEGAETL AHFCPMELRG PEPLGSRPRQ PNLIPWAAAG ENSBTAP00000015588/1-803 SQQGRLEEEE EEGEEGTEPP AHFFPMELRG PEPLGSRPAR QNPGLWAAAG ENSTTRP00000008446/1-797 TQQGPLEEEE EDREEGTEPP AHFFPMELRG PEPLGSRPAR QNPRLWAAAG bmy_16117T0/1-771 TQQGPLEEEE EDREEGTELP AHFFPMELRG PEPLGSRPAR QNPRLWAAAG BACU012072/1-1266 TQQGPLEEEE EEREEGTELP AHFFPMELRG PEPLGSRPAR QNPRLWAAAG 451 500 ENSP00000420525/1-801 RRAAPYLVLT ALLIFTGAFL LGYVAFRGSC QACGDSVLVV SEDVNYEPDL ENSBTAP00000015588/1-803 RRAAPYLVLT ALLIFTGAFL LGYVAFRGSC QACGDDVMVV SEDVNDELSP ENSTTRP00000008446/1-797 RRATPYLVLT ALLIFTGAFL LGYVVFRGSC QACGDDVMVV SEDMNHELSP bmy_16117T0/1-771 RRAAPYLVLT ALLIFTGAFL LGYVVFRGSC QACGDDVMVV SEDVNHELGP BACU012072/1-1266 RRAAPYLVLT ALLIFTGAFL LGYVVFRGSC QACGDDVMVV SEDVNHELGP 501 550 ENSP00000420525/1-801 DFHQGRLYWS DLQAMFLQFL GEGRLEDTI- ---------- ---------R ENSBTAP00000015588/1-803 DSHQGTLYWS DLQAMFLRFL GEGRLEDTI- ---------- ---------R ENSTTRP00000008446/1-797 DSHQGTLYWS DLQAMFLRHL GEGRLEDTI- ---------- ---------R bmy_16117T0/1-771 DSHQGTLYWS DLQAMFLRHL GEGRLEDTI- ---------- ---------R BACU012072/1-1266 DSHQGTLYWS DLQAMFLRHL GEGRLEDTIR YPEVPAPLSS RTPMPLSLRR 551 600 ENSP00000420525/1-801 QTSLRERVAG SAGMAALTQD IRAALSRQKL DHVWTDTHYV GLQFPDPAHP ENSBTAP00000015588/1-803 QTSLRERVAG SAGMAALAQD IRAELLRQRL DHVWMDTHYV GLQFPDPARP ENSTTRP00000008446/1-797 QTSLRERVAG SAGMAALVQD LRAVLLSQKL DHVWMDTHYV GLQFPDPAHP bmy_16117T0/1-771 QTSLRERVAG SAGMAALVRD LRAVLLRQKL DHVWMDTHYV GLQFPDPAHP BACU012072/1-1266 QTSLRERVAG SAGMAALVRD LRALLLRQKL DHVWMDTHYV GLQFPDPAHP 601 650 ENSP00000420525/1-801 NTLHWVDEAG KVGEQLPLED PDVYCPYSAI GNVTGELVYA HYGRPEDLQD ENSBTAP00000015588/1-803 NTLHWVDASG KLGEQLPLED PDVYCPYSAT GNATGKLVYA HYGRPEDLQE ENSTTRP00000008446/1-797 NALHWVDDTG N-GEQLPLEE PDIYCPYTAT GNATGELVYA HYGRPEDLQD bmy_16117T0/1-771 NALHWVDAAG KHGEQLPLED PDVYCPYSAT GNATGELVYA HYGRPEDLQD BACU012072/1-1266 NALHWVDAAG KHGEQLPLED PDVYCPYSAT GNATGELVYA HYGRPEDLQD 651 700 ENSP00000420525/1-801 LRARGVDPVG RLLLVRVGVI SFAQKVTNAQ DFGAQGVLIY PEPADFSQDP ENSBTAP00000015588/1-803 LRARGVEPAG RLLLVRLGVI NFAQKVASAQ DFGAQGVLIY PDPADFSQGP ENSTTRP00000008446/1-797 LRARGVEPKG RLLLVRLGVI NFAQKVASAQ DFGAQGVLIY PDPADFSQGP bmy_16117T0/1-771 LRARGVEPKG RLLLVRLGVI NFAQKVASAQ DFGAQGVLIY PDPADFSQGP BACU012072/1-1266 LRARGVEPKG RLLLVRLGVI NFAQKVASAQ DFGAQGVLIY PDPADFSQGP 701 750 ENSP00000420525/1-801 PKPSLSSQQA VYGHVHLGTG DPYTPGFPSF NQTQFPPVAS SGLPSIPAQP ENSBTAP00000015588/1-803 HKLSLSSHRA VYGHVHLGTG DPYTPGFPSF NQTQFPPVQS SGLPSIPAQP ENSTTRP00000008446/1-797 HKLSLSSHRA VYGHVHLGTG DPYTPGFPSF NQTQFPPVQS SGLPSIPAQP bmy_16117T0/1-771 HKLSLSSHRA VYGHVHLGTG DPYTPGFPSF NQTQFPPVQ- ---------- BACU012072/1-1266 HKLSLSSHRA VYGHVHLGTG DPYTPGFPSF NQTQFPPVQS SGLPIIPAQP 751 800 ENSP00000420525/1-801 ISADIASRLL RKLKGPVAPQ EWQGSLLGSP YHLGPGPRLR LVVNNHRTST ENSBTAP00000015588/1-803 ISADIASLLL RKLEGPVAPQ EWQGHLPVSP YRLGPGPGLH LGVSNHRAST ENSTTRP00000008446/1-797 ISADTASLLL RKLEGPVAPQ EWQGHLPV-P YRLGPGPGLH LGVNNRRAST bmy_16117T0/1-771 ---------- -KLEGPVAPQ EWQGHLPVSP YRLGPGPGLH LGVNNHRAST BACU012072/1-1266 ISADTASLLL RKLEGPVAPQ EWQGHLPVSP YRLGPGPGLH LGVNNHRAST 801 850 ENSP00000420525/1-801 PINNIFGCIE GRSEPDHYVV IGAQRDAWGP GAAKSAVGTA ILLELVRTFS ENSBTAP00000015588/1-803 PISNIFGCIE GRSEPDQYVV IGAQRDAWGP GAAKSAVGTA ILLELVRTFS ENSTTRP00000008446/1-797 PISNIFGCIE GRSEPDHYVV IGAQRDAWGP GAARSAVGTA ILLELVRTFS bmy_16117T0/1-771 PISNIFGCIE GRSEPDHYVV IGAQRDAWGP GAAKSAVGTA ILLELVRTFS BACU012072/1-1266 PISNIFGCIE GRSEPDHYVV IGAQRDAWGP GAAKSAVGTA ILLELVRTFS 851 900 ENSP00000420525/1-801 SMVSNGFRPR RSLLFISWDG GDFGSVGSTE WLEGYLSVLH LKAVVYVSLD ENSBTAP00000015588/1-803 SMVSNGFQPR RSLLFISWDG GDFGSVGSME WLEGYLSVLH LKAVVYVSLD ENSTTRP00000008446/1-797 SMVSNGFRPR RSLLFISWDG GDFGSVGSME WLEGYLSVLH LKAVVYVSLD bmy_16117T0/1-771 SMVSNGFRPR RSLLFISWDG GDFGSVGSME WLEGYLSVLH LKAVVYVSLD BACU012072/1-1266 SMVSNGFRPR RSLLFISWDG GDFGSVGSME WLEGYLSVLH LKAVVYVSLD 901 950 ENSP00000420525/1-801 NAVLGDDKFH AKTSPLLTSL IESVLKQ--- ---------- VDSPNHSGQT ENSBTAP00000015588/1-803 NAVLGDDKFH AKTSPLLIGL IENILKQ--- ---------- VDSPNRSGQT ENSTTRP00000008446/1-797 NAVLGDDKFH AKTSPLLISL IENILKQ--- ---------- VDSPNRSGQT bmy_16117T0/1-771 NA-------- ---------- ---------- ---------- VDSPNRSGQT BACU012072/1-1266 NAVLGDDKFH AKTSPLLISL IENILKQARA RPGAGDEGKL VDSPNRSGQT 951 1000 ENSP00000420525/1-801 LYEQVVFTNP SWDAEVIRPL PMDSSAYSFT AFVGVPAVEF SFMEDDQAYP ENSBTAP00000015588/1-803 LYEQVVVTNH SWEAEVIRPL PMDSSAYSFT AFAGVPAVEF SFLEDGPAYP ENSTTRP00000008446/1-797 LFEQVVFNNH SWEAEVIRPL PMDSSAYSFT AFAGVPAVEF SFMEDGPMYP bmy_16117T0/1-771 LFEQVVFNNH SWEAEVIRPL PMDSSAYSFT AFAGVPAVEF SFMEDGPVYP BACU012072/1-1266 LFEQVVFNNH SWEAEVIRPL PMDSSAYSFT AFAGVPAVEF SFMEDGPVYP 1001 1050 ENSP00000420525/1-801 FLHTKEDTYE NLHKVLQGRL PAVAQAVAQL AGQLLIRLSH DRLLPLDFGR ENSBTAP00000015588/1-803 FLHTKDDTYE NLHRVLRGRL PAVAQAVAQL AGQLLIRLSH DHLLPLDFGR ENSTTRP00000008446/1-797 FLHTKDDTYE NLHRVLRGRL PAVAQAVAQL AGQLLIRLSH DHLLPLDFGR bmy_16117T0/1-771 FLHTKDDTYE NLHRVLRGRL PAVAQAVAQL AGQLLIRLSH DHLLPLDFGR BACU012072/1-1266 FLHTKDDTYE NLHRVLRGRL PAVAQAVAQL AGQLLIRLSH DHLLPLDFGR 1051 1100 ENSP00000420525/1-801 YGDVVLRHIG NLNEFSGDLK ---------- ---------- ---------- ENSBTAP00000015588/1-803 YGDVVLRHIG SLNEFSGDLK ---------- ---------- ---------- ENSTTRP00000008446/1-797 YGDVVLRHIG SLNEFSGDLK ---------- ---------- ---------- bmy_16117T0/1-771 YGDVVLRHIG SLNEFSGDLK ---------- ---------- ---------- BACU012072/1-1266 YGDVVLRHIG SLNEFSGDLK VQDAKPAPGF WRVLSPYTSP LLPGPGSQLR 1101 1150 ENSP00000420525/1-801 ---------- ---------- ------ARGL TLQWVYSARG DYIRAAEKLR ENSBTAP00000015588/1-803 ---------- ---------- ------ARGL TLQWVYSARG DYIRAAEKLR ENSTTRP00000008446/1-797 ---------- ---------- ------ARGL TLQWVYSARG DYIRAAEKLR bmy_16117T0/1-771 ---------- ---------- ------ARGL TLQWVYSARG DYIRAAEKLR BACU012072/1-1266 PPAPGPPPWA RVMAPAAGPS PRLRPQARGL TLQWVYSARG DYIRAAEKLR 1151 1200 ENSP00000420525/1-801 QEIYSSEERD ERLTRMYNVR IMRVEFYFLS QYVSPADSPF RHIFMGRGDH ENSBTAP00000015588/1-803 KEIYSSEESD ERLMRMYNVR IMRVEFYFLS QYVSPADSPF RHILLGRGDH ENSTTRP00000008446/1-797 KEIYSSEESD ERLTRMYNVR IMRVEFYFLS QYVSAADSPF RHIFLGRGDH bmy_16117T0/1-771 KEIYSSEESD ERLTRMYNVR IMRVEFYFLS QYVSAADSPF RHIFLGRGDH BACU012072/1-1266 KEIYSSEESD ERLTRMYNVR IMRVEFYFLS QYVSAADSPF RHIFLGRGDH 1201 1250 ENSP00000420525/1-801 TLGALLDHLR LLRSNSSGTP GA----TSST GFQESRFRRQ LALLTWTLQG ENSBTAP00000015588/1-803 TLHALLDHVR LLRAGGPGAT SS--QVARGL GFQESRFRRQ LALLTWTLQG ENSTTRP00000008446/1-797 TLGALVDHVR LLRSSGPGAL GA---MWRGA GFQESRFRRQ LALLTWTL-G bmy_16117T0/1-771 TLGALLDHVR LLRSSGPGAL GEEAQVARGL GFQESRFRRQ LALLTWTLQG BACU012072/1-1266 TLGALLDHVR LLRSSGPGAL GEEAQVARGL GFQESRFRRQ LALLTWTLQG 1251 1300 ENSP00000420525/1-801 AANALSGDVW NIDNNF ENSBTAP00000015588/1-803 AANALSGDVW NIDNNF ENSTTRP00000008446/1-797 AANALS-DV- NIDNNF bmy_16117T0/1-771 AANALSGDVW NIDNNF BACU012072/1-1266 AANALSGDVW NIDNNF