KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:23 2014 Check: 00 .. Name: bmy_11837T0/1-140 Len: 191 Check: 390 Weight: 1.00 Name: ENSP00000360214/1-141 Len: 191 Check: 715 Weight: 1.00 Name: ENSBTAP00000015591/1-151 Len: 191 Check: 6600 Weight: 1.00 Name: BACU020381/1-135 Len: 191 Check: 1135 Weight: 1.00 Name: ENSTTRP00000015104/1-141 Len: 191 Check: 2897 Weight: 1.00 // 1 50 bmy_11837T0/1-140 MSFSLNFTLP AN-------- ---------- ---TDCGPSL GLAAGIPSLV ENSP00000360214/1-141 MSFSLNFTLP AN-------- -TTSSP-VTG GKETDCGPSL GLAAGIPLLV ENSBTAP00000015591/1-151 MSFSLNFTLP ANTVSTAAPA YQTSSPVVTD GKGTDCGPSL GLAASIPSLV BACU020381/1-135 MFFST----- ---------- -QTSSPAVTS GKGADCGPSL GLAAGIPSLV ENSTTRP00000015104/1-141 -SFSLNFTLP AN-------- -TTSSPAVTS GKGADCGPSL GLAAGIPSLV 51 100 bmy_11837T0/1-140 ATALLVALLF TLIHQRRSSS ESTEVISSFF GSGSVGKNRM VSGVAKSSSG ENSP00000360214/1-141 ATALLVALLF TLIHRRRSSI EAME------ ---------- ---------- ENSBTAP00000015591/1-151 ATALLVALLF TLIHRRRSSS ESTE------ ---------- ---------- BACU020381/1-135 ATALLVALLF TLIHQRRSSS ESTE------ ---------- ---------- ENSTTRP00000015104/1-141 ATALLVALLF TLIHQRRSSS ESTE------ ---------- ---------- 101 150 bmy_11837T0/1-140 EGRFVATANT SVQWESERPC EISEIYDSPR IAEE------ ---------- ENSP00000360214/1-141 ---------- ----ESDRPC EISEIDDNPK ISENPRRSPT HEKNTMGAQE ENSBTAP00000015591/1-151 ---------- ----ESERPC EITEIYDSPQ IAENPRRLPT QEKNMMGGGE BACU020381/1-135 ---------- ----ESERPC EISEIYDSPR IAENPRRLPT QEKNIMGAEE ENSTTRP00000015104/1-141 ---------- ----ESERPC EISEIYDSPR IAENPRRLPT QEKNITGAEE 151 200 bmy_11837T0/1-140 ----VRSPFV TLTVLLSKWR EGGDCG---G LF---PD--- - ENSP00000360214/1-141 AHIYVKTVAG SEEPVHDRYR PTIEMERRRG LWWLVPRLSL E ENSBTAP00000015591/1-151 AHIYVKTVSG SEESMRDTYR PPVEVERRRG LWWLIPRLSL E BACU020381/1-135 AHIYVKTVSG SEEPIRDTHR PAVEVERRRG LWWLIPRLSL E ENSTTRP00000015104/1-141 AHIYVQTVPG SEEPIRDTYR PAVEVQRRRA LWWLIPRLSM E