KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:26 2014 Check: 00 .. Name: ENSP00000309782/1-343 Len: 343 Check: 3238 Weight: 1.00 Name: ENSBTAP00000015595/1-343 Len: 343 Check: 5478 Weight: 1.00 Name: ENSTTRP00000008028/1-343 Len: 343 Check: 6334 Weight: 1.00 Name: bmy_17678T0/1-327 Len: 343 Check: 4775 Weight: 1.00 Name: BACU003564/1-327 Len: 343 Check: 4693 Weight: 1.00 // 1 50 ENSP00000309782/1-343 MAGNCSWEAH PGNRNKMCPG LSEAPELYSR GFLTIEQIAM LPPPAVMNYI ENSBTAP00000015595/1-343 MAGNCSWEAH PTNWNKMCPG VSEAPELYSR GFLTIEQITM LPPPAIMNYI ENSTTRP00000008028/1-343 MAGNCSWEAH PTNRNKMCPG VSEAPELYGR GFLTIAQIAM LPPPAVMNYI bmy_17678T0/1-327 ---------- ------MCPG VSEAPELYSR GFLTIEQITM LPPPAVMNYI BACU003564/1-327 ---------- ------MCPG VSEAPELYSR GFLTIEQITM LPPPAVMNYI 51 100 ENSP00000309782/1-343 FLLLCLCGLV GNGLVLWFFG FSIKRNPFSI YFLHLASADV GYLFSKAVFS ENSBTAP00000015595/1-343 FLLLCLCGLV GNGLVLWFFG FSIKRSPFSV YFLHLASADV GYLFSKAVFS ENSTTRP00000008028/1-343 FLLLCLCGLV GNGLVLWFFG FSIKRSPFSI YFLHLASADV GYLFSKAVFS bmy_17678T0/1-327 FLLLCLCGLV GNGLVLWFFG FSIKRSPFST YFLHLASADV GYLFSKAVFS BACU003564/1-327 FLLLCLCGLV GNGLVLWFFG FSIKRSPFST YFLHLAGADV GYLFSKAVFS 101 150 ENSP00000309782/1-343 ILNTGGFLGT FADYIRSVCR VLGLCMFLTG VSLLPAVSAE RCASVIFPAW ENSBTAP00000015595/1-343 ILNTGGFLGP FADYVRAVSR IVGLCMVLTG VSLLPAISSE RCLSVVFPTW ENSTTRP00000008028/1-343 ILNTGGFLGS FADYVRAVSR ILGLCMFVTS VSLLPAVSSE RCLSVIFPSW bmy_17678T0/1-327 ILNTGGFLGS FADYVRAVSR ILGLCMFVTS VSLLPAISSE RCLSVIFPSW BACU003564/1-327 ILNTGGFLGS FADYVRAVSR ILGLCMFVTS VSLLPAISSE RCLSVVFPSW 151 200 ENSP00000309782/1-343 YWRRRPKRLS AVVCALLWVL SLLVTCLHNY FCVFLGRGAP GAACRHMDIF ENSBTAP00000015595/1-343 YWRRRPKRLS AVVCSLLWAL SLLVTCVHNY FCVFLGRQAS GAGCTHMDAF ENSTTRP00000008028/1-343 YWRRRPKRLS AVVCSLLWSL SLLVTSIHGY FCVFLGRQAS GPGCGHVDTF bmy_17678T0/1-327 FWRRRPKRLS AVVCSLLWTL SLLVTSIHNY FCMFLGRQAP GTGCRHMDAF BACU003564/1-327 FWRRRPKRLS AVVCSVLWTL SLLVTSIHNY FCMFLGRQAP ETGCRHMDAF 201 250 ENSP00000309782/1-343 LGILLFLLCC PLMVLPCLAL ILHVECRARR RQRSAKLNHV ILAMVSVFLV ENSBTAP00000015595/1-343 LGILLFLVFC PLMVLPCLAL ILHVECRARR RQRSAKLNHV ILAVVSVFLV ENSTTRP00000008028/1-343 LGILLFLVFC PLMALPCLAL VLHVECRARR RQRSAKLNHV ILAMVSVFLV bmy_17678T0/1-327 LGILFFLVFC PLMVLPCLAL ILHVECRARR RQRSAKLNHV ILAMVSVFLV BACU003564/1-327 LGILFFLVFC PLMVLPCLAL ILHVECRARR RQRSAKLNHV ILAMVSVFLV 251 300 ENSP00000309782/1-343 SSIYLGIDWF LFWVFQIPAP FPEYVTDLCI CINSSAKPIV YFLAGRDKSQ ENSBTAP00000015595/1-343 SSIYLGIDWF LFWVFQIPAP FPEYVTDLCL CINSCAKPVV YFLAGRDKSQ ENSTTRP00000008028/1-343 SSIYLGIDWF LFWVFQIPAP FPEYVTDLCI CINSSAKPVV YFLAGRDKSQ bmy_17678T0/1-327 SSIYLGIDWF LFWVFQIPAP FPEYVTDLCI CINSSAKPVV YFLAGRDKSQ BACU003564/1-327 SSIYLGIDWF LFWVFQIPAP FPEYVTDLCI CINSSAKPVV YFLAGRDKSQ 301 350 ENSP00000309782/1-343 RLWEPLRVVF QRALRDGAEL GEAGGSTPNT VTMEMQCPPG NAS ENSBTAP00000015595/1-343 RLWEPLRVVF QRALRDGAEP GEAGGGTPNT VTLEMQCPSG NAS ENSTTRP00000008028/1-343 RLWEPLRVVF QRALRDGAEP GEAGGSTPNT VTMEMQCASG NAS bmy_17678T0/1-327 RLWEPLRVVF QRALRDGAEP GEVGGSTPNT VTMEMQCSSG NAS BACU003564/1-327 RLWEPLRVVF QRALRDGAEP GEAGGSTPNT VTMEMQCSSG NAS