KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:30 2014 Check: 00 .. Name: bmy_07901T0/1-389 Len: 683 Check: 5800 Weight: 1.00 Name: ENSP00000261681/1-675 Len: 683 Check: 9933 Weight: 1.00 Name: ENSBTAP00000015625/1-675 Len: 683 Check: 708 Weight: 1.00 Name: ENSTTRP00000014973/1-621 Len: 683 Check: 6376 Weight: 1.00 Name: BACU020361/1-620 Len: 683 Check: 1451 Weight: 1.00 // 1 50 bmy_07901T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000261681/1-675 MTTSHMNGHV TEESDSEVKN VDLASPEEHQ KHREMAVDCP GDLGTRMMPI ENSBTAP00000015625/1-675 MTTSHMNGHV TEESDNEVKN VDLASPEEHQ KHREMAVDCP GDLGTRMMPV ENSTTRP00000014973/1-621 MTTSHMNGHV TEESDNEVKN VDLASPEEHQ KHREMAVDCP GDLGTRMMPV BACU020361/1-620 MTTSHMNGHV TEESDNEVKN VDLASPEEHQ KHREMAVDCP GDLGTRMMPV 51 100 bmy_07901T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000261681/1-675 RRSAQLERIR QQQEDMRRRR EEEGKKQELD LNSSMRLKKL AQIPPKTGID ENSBTAP00000015625/1-675 RRSAQLERIR QQQEDMRRRR EEEGKKQELD LNSSMRLKKL AQIPPKTGID ENSTTRP00000014973/1-621 RRSAQLERIR QQQEDMRRRR EEEGKKQELD LNSSMRLKKL AQIPPKTGID BACU020361/1-620 RRSAQLERIR QQQEDMRRRR EEEGKKQELD LNSSMRLKKL AQIPPKTGID 101 150 bmy_07901T0/1-389 ---------- ---------- ---------- ---------- ---------- ENSP00000261681/1-675 NPMFDTEEGI VLESPHYAVK ILEIEDLFSS LKHIQHTLVD SQSQEDISLL ENSBTAP00000015625/1-675 NPIFDTEEGI VLESPHYAVK ILEVEDLFAS LKHIQHTLVD SQSQEDISLL ENSTTRP00000014973/1-621 NPIFDTEEGI ILESPHYAVK ILEV-DLFSS LTHIHHTLVD SQ-------- BACU020361/1-620 NPIFDTEEGI ILESPHYAVK IL-VEDLFSS LKHIQHTL-- ---------- 151 200 bmy_07901T0/1-389 ---------- ---------- ---------- ---------- --VQTVLKAI ENSP00000261681/1-675 LQLVQNKDFQ NAFKIHNAIT VHMNKASPPF PLISNAQDLA QEVQTVLKPV ENSBTAP00000015625/1-675 LQLVQNKDFQ NAFKIHNAVT VHMNKASPPF PLISNAQDLA QEVQTVLKPV ENSTTRP00000014973/1-621 ---------- ---------- ---------- ---------- --VQSVLKPI BACU020361/1-620 ---------- ---------- ---------- ---------- --VQSVLKAI 201 250 bmy_07901T0/1-389 HQKEGQELTA LLNAPHIQAL LLAHDKVAEQ EMQLEPITDE RVYESIGQYG ENSP00000261681/1-675 HHKEGQELTA LLNTPHIQAL LLAHDKVAEQ EMQLEPITDE RVYESIGQYG ENSBTAP00000015625/1-675 HQKEGQELTA LLSAPHIQAL LLAHDKVAEQ EMQLEPITDE RVYESVGQYG ENSTTRP00000014973/1-621 HQKEGQELTA LLNAPHIQAL LLAHDKVAEQ EMQLEPITDE RVYESIGQYG BACU020361/1-620 HQKEGQELTA LLNAPHIQAL LLAHDKVAEQ EMQLEPITDE RVYESIGQYG 251 300 bmy_07901T0/1-389 GETVKIVRIE KARDIPLGAT VRNEMDSVII SRIVKGGAAE KSGLLHEGDE ENSP00000261681/1-675 GETVKIVRIE KARDIPLGAT VRNEMDSVII SRIVKGGAAE KSGLLHEGDE ENSBTAP00000015625/1-675 GETVKIVRIE KARDIPLGAT VRNEMDSVII SRIVKGGAAE KSGLLHEGDE ENSTTRP00000014973/1-621 GETVKIVRIE KARDIPLGAT VRNEMDSVII SRIVKGGAAE KSGLLHEGDE BACU020361/1-620 GETVKIVRIE KARDIPLGAT VRNEMDSVII SRIVKGGAAE KSGLLHEGDE 301 350 bmy_07901T0/1-389 VLEINGIEIR GKDVNEVFDL LSDMHGTLTF VLIPSQQIKP LPAKETVIHV ENSP00000261681/1-675 VLEINGIEIR GKDVNEVFDL LSDMHGTLTF VLIPSQQIKP PPAKETVIHV ENSBTAP00000015625/1-675 VLEINGIEIR GKDVNEVFDL LSDMHGTLTF VLIPSQQIKP PPAKETVIHV ENSTTRP00000014973/1-621 VLEINGIEIR GKDVNEVFDL LSDMHGTLTF VLIPSQQIKP PPAKETVIHV BACU020361/1-620 VLEINGIEIR GKDVNEVFDL LSDMHGTLTF VLIPSQQIKP PPAKETVIHV 351 400 bmy_07901T0/1-389 KAHFDYDPSD DPYVPCRELG LSFQKGDILH VISQEDPNWW QAYREGDEDN ENSP00000261681/1-675 KAHFDYDPSD DPYVPCRELG LSFQKGDILH VISQEDPNWW QAYREGDEDN ENSBTAP00000015625/1-675 KAHFDYDPSD DPYVPCRELG LSFQKGDILH VISQEDPNWW QAYREGDEDN ENSTTRP00000014973/1-621 KAHFDYDPSD DPYVPCRELG LSFQKGDILH VISQEDPNWW -AYE--WDDN BACU020361/1-620 KAHFDYDPSD DPYVPCRELG LSFQKGDILH VISQEDPNWW QAYREGDEDN 401 450 bmy_07901T0/1-389 QPLAGLVPGK RZYRKSFQQQ REAMKQTIEE DKEPEKSGKL WCAKKNKKKR ENSP00000261681/1-675 QPLAGLVPG- ----KSFQQQ REAMKQTIEE DKEPEKSGKL WCAKKNKKKR ENSBTAP00000015625/1-675 QPLAGLVPG- ----KSFQQQ REAMKQTIEE DKEPEKSGKL WCAKKNKKKR ENSTTRP00000014973/1-621 QPLAGLVPG- ----KSFQQQ REAMKQTIEE DKEPEKSGKL WCAKKNKKKR BACU020361/1-620 QPLAGLVPG- ----KSFQQQ REAMKQTIEE DKEPEKSGKL WCAKKNKKKR 451 500 bmy_07901T0/1-389 KKVLYNANKN DD-------- ---------- ---------- ---------- ENSP00000261681/1-675 KKVLYNANKN DDYDNEEILT YEEMSLYHQP ANRKRPIILI GPQNCGQNEL ENSBTAP00000015625/1-675 KKVLYNANKN DDYDNEEILT YEEMSLYHQP ANRKRPIILI GPQNCGQNEL ENSTTRP00000014973/1-621 KKVLYNANKN DDYDNEEILT YEEMSLYHQP ANRKRPIILI GPQNCGQNEL BACU020361/1-620 KKVLYNANKN DDYDNEEILT YEEMSLYHQP ANRKRPIILI GPQNCGQNEL 501 550 bmy_07901T0/1-389 ---------- ---------- --------PG TWYTIYS--- ---------Y ENSP00000261681/1-675 RQRLMNKEKD RFASAVPHTT RSRRDQEVAG RDYHFVSRQA FEADIAAGKF ENSBTAP00000015625/1-675 RQRLMNKEKD RFASAVPHTT RNRRDHEVAG RDYHFVSRQA FEADIAAGKF ENSTTRP00000014973/1-621 RQRLMNKEKD RFASAVPHTT RSRRDHEVAG RDYHFVSRQA FEADVAAGKF BACU020361/1-620 RQRLMNKEKD RFASAVPHTT RSQRDHEVAG RDYHFVSRQA FEADVAAGKF 551 600 bmy_07901T0/1-389 I---EWLKSI FS-------- ---------- ---LQSLKTL RNSDLKPYII ENSP00000261681/1-675 IEHGEFEKNL YGTSIDSVRQ VINSGKICLL SLRTQSLKTL RNSDLKPYII ENSBTAP00000015625/1-675 IEHGEFEKNL YGTSIDSVRQ VINSGKICLL SLRTQSLKTL RNSDLKPYII ENSTTRP00000014973/1-621 IEHGEFEKNL YGTSIDSVRQ VINSGKICLL SLRTQSLKTL RNSDLKPYII BACU020361/1-620 IEHGEFEKNL YGTSIDSVRQ VINSGKICLL SLRTQSLKTL RNSDLKPYII 601 650 bmy_07901T0/1-389 FIAPPSQERL RALLAKEGKN PKPEELREII EKTREMEQNN GHYFDTAIVN ENSP00000261681/1-675 FIAPPSQERL RALLAKEGKN PKPEELREII EKTREMEQNN GHYFDTAIVN ENSBTAP00000015625/1-675 FIAPPSQERL RALLAKEGKN PKPEELREII EKTREMEQNN GHYFDTAIVN ENSTTRP00000014973/1-621 FIAPPSQERL RALLAKEGKN PKPEELREII EKTREMEQNN GHYFDTAIVN BACU020361/1-620 FIAPPSQERL RALLAKEGKN PKPEELREII EKTREMEQNN GHYFDTAIVN 651 700 bmy_07901T0/1-389 SDLDKAYQEL LRLINKLDTE PQWVPSTWLR NER ENSP00000261681/1-675 SDLDKAYQEL LRLINKLDTE PQWVPSTWLR --- ENSBTAP00000015625/1-675 SDLDKAYQEL LRLINKLDTE PQWVPSTWLR --- ENSTTRP00000014973/1-621 SDLDKAYQEL LRLINKLDTE PQWVPSTWLR --- BACU020361/1-620 SDLDKAYQEL LRLINKLDTE PQWVPSTWLR ---