KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:31 2014 Check: 00 .. Name: bmy_03925T0/1-1183 Len: 1183 Check: 2469 Weight: 1.00 Name: BACU008133/1-1058 Len: 1183 Check: 6510 Weight: 1.00 Name: ENSP00000267116/1-1076 Len: 1183 Check: 8285 Weight: 1.00 Name: ENSBTAP00000015626/1-1076 Len: 1183 Check: 8995 Weight: 1.00 Name: ENSTTRP00000006727/1-1041 Len: 1183 Check: 909 Weight: 1.00 // 1 50 bmy_03925T0/1-1183 MRTEPGPGHG DPQHHGPASP PLPKPGVPHL TPRFRSGPLP ENRFSLQPPL BACU008133/1-1058 ---------- ---------- ----MGDCST FG-------- ---------- ENSP00000267116/1-1076 ---------- ---------- ----MGILSI TD-------- ------QPPL ENSBTAP00000015626/1-1076 ---------- ---------- ----MGILSI TD-------- ------QPPL ENSTTRP00000006727/1-1041 ---------- ---------- ----MGILSI TD-------- ------QPPL 51 100 bmy_03925T0/1-1183 VQAIFSRDVE EVRSLLSQKE NINVLDQERR TPLHAAAYVG DVPILQLLLM BACU008133/1-1058 -------DGE Q--------- -----DQERR TPLHAAAYVG DVPILQLLLM ENSP00000267116/1-1076 VQAIFSRDVE EVRSLLSQKE NINVLDQERR TPLHAAAYVG DVPILQLLLM ENSBTAP00000015626/1-1076 VQAIFSRDVE EVRSLLSQKE NINVLDQERR TPLHAAAYVG DVPILQLLLM ENSTTRP00000006727/1-1041 VQAIFSRDVE EVRSLLSQKE NINVLDQERR TPLHAAAYVG DVPILQLLLM 101 150 bmy_03925T0/1-1183 SGESGELEGA NVNAKDTLWL TPLHRAAASR NEKVLGLLLA HSADVNARDK BACU008133/1-1058 SGESGELEGA NVNAKDTLWL TPLHRAAASR NEKVLGLLLA HSADVNARDK ENSP00000267116/1-1076 S-------GA NVNAKDTLWL TPLHRAAASR NEKVLGLLLA HSADVNARDK ENSBTAP00000015626/1-1076 S-------GA NVNAKDTLWL TPLHRAAASR NEKVLGLLLA HSADVNARDK ENSTTRP00000006727/1-1041 S-------GA NVNAKDTLWL TPLHRAAASR NEKVLGLLLA HSADVNARDK 151 200 bmy_03925T0/1-1183 LWQTPLHVAA ANRATKCAEA LAPLLSSLNV ADRSGRSALH HAVHSGHLET BACU008133/1-1058 LWQTPLHVAA ANRATKCAEA LAPLLSSLNV ADRSGRSALH HAVHSGHLET ENSP00000267116/1-1076 LWQTPLHVAA ANRATKCAEA LAPLLSSLNV ADRSGRSALH HAVHSGHLET ENSBTAP00000015626/1-1076 LWQTPLHVAA ANRATKCAEA LAPLLSSLNV ADRSGRSALH HAVHSGHLET ENSTTRP00000006727/1-1041 LWQTPLHVAA ANRATKCAEA LAPLLSSLNV ADRSGRSALH HAVHSGHLET 201 250 bmy_03925T0/1-1183 VNLLLSKGAS LNVCDKKERQ PLHWAAFLGH LEVLKLLVAR GADLGCKDRK BACU008133/1-1058 VNLLLSKGAS LNVCDKKERQ PLHWAAFLGH LEVLKLLVAR GADLGCKDRK ENSP00000267116/1-1076 VNLLLNKGAS LNVCDKKERQ PLHWAAFLGH LEVLKLLVAR GADLGCKDRK ENSBTAP00000015626/1-1076 VNLLLNKGAS LNVCDKKERQ PLHWAAFLGH LEVLKLLVAR GADLGCKDRK ENSTTRP00000006727/1-1041 VNLLLSKGAS LNVCDKKERQ PLHWAAFLGH LEVLKLLVAR GADLGCKDRK 251 300 bmy_03925T0/1-1183 GYGLLHTAAA SGQIEVVKYL LRMGAEIDEP NAFGNTALHI ACYLGQDAVA BACU008133/1-1058 GYGLLHTAAA SGQIEVVKYL LRMGAEIDEP NAFGNTALHI ACYLGQDAVA ENSP00000267116/1-1076 GYGLLHTAAA SGQIEVVKYL LRMGAEIDEP NAFGNTALHI ACYLGQDAVA ENSBTAP00000015626/1-1076 GYGLLHTAAA SGQIEVVKYL LRMGAEIDEP NAFGNTALHI ACYLGQDAVA ENSTTRP00000006727/1-1041 GYGLLHTAAA SGQIEVVKYL LRMGAEIDEP NAFGNTALHI ACYLGQDAVA 301 350 bmy_03925T0/1-1183 IELVNAGANV NQPNDKGFTP LHVAAVSTNG ALCLELLVNN GADVNYQSKE BACU008133/1-1058 IELVNAGANV NQPNDKGFTP LHVAAVSTNG ALCLELLVNN GADVNYQSKE ENSP00000267116/1-1076 IELVNAGANV NQPNDKGFTP LHVAAVSTNG ALCLELLVNN GADVNYQSKE ENSBTAP00000015626/1-1076 IELVNAGANV NQPNDKGFTP LHVAAVSTNG ALCLELLVNN GADVNYQSKE ENSTTRP00000006727/1-1041 IELVNAGANV NQPNDKGFTP LHVAAVSTNG ALCLELLVNN GADVNYQVPE 351 400 bmy_03925T0/1-1183 GKSPLHMAAI HGRFTRSQIL IQNGSEIDCA DKFGNTPLHV AARYGHELLI BACU008133/1-1058 GKSPLHMAAI HGRFTRSQIL IQNGSEIDCA DKFGNTPLHV AARYGHELLI ENSP00000267116/1-1076 GKSPLHMAAI HGRFTRSQIL IQNGSEIDCA DKFGNTPLHV AARYGHELLI ENSBTAP00000015626/1-1076 GKSPLHMAAI HGRFTRSQIL IQNGSEIDCA DKFGNTPLHV AARYGHELLI ENSTTRP00000006727/1-1041 GKSPLHMAAI HGRFTRSQIL IQNGSEIDCA DKFGNTPLHV AARYGHELLI 401 450 bmy_03925T0/1-1183 STLMTNGADT ARRGIHDMFP LHLAVLFGFS DCCRKLLSSG QLYSIVSSLS BACU008133/1-1058 STLMTNGADT ARRGIHDMFP LHLAVLFGFS DCCRKLLSSG QLYSIVSSLS ENSP00000267116/1-1076 STLMTNGADT ARRGIHDMFP LHLAVLFGFS DCCRKLLSSG QLYSIVSSLS ENSBTAP00000015626/1-1076 STLMTNGADT ARRGIHDMFP LHLAVLFGFS DCCRKLLSSG QLYSIVSSLS ENSTTRP00000006727/1-1041 STLMTNGADT ARRGIHDMFP LHLAVLFGFS DCCRKLLSSG QLYSIVSSLS 451 500 bmy_03925T0/1-1183 NEHVLSAGFD INTPDNLGRT CLHAAASGGN VECLNLLLSS GADLRRRDKF BACU008133/1-1058 NEHVLSAGFD INTPDNLGRT CLHAAASGGN VECLNLLLSS GADLRRRDKF ENSP00000267116/1-1076 NEHVLSAGFD INTPDNLGRT CLHAAASGGN VECLNLLLSS GADLRRRDKF ENSBTAP00000015626/1-1076 NEHVLSAGFD INTPDNLGRT CLHAAASGGN VECLNLLLSS GADLRRRDKF ENSTTRP00000006727/1-1041 NEHVLSAGFD INTPDNLGRT CLHAAASGGN VECLNLLLSS GADLRRRDKF 501 550 bmy_03925T0/1-1183 GRCVNVQEYI YIRNIRSERQ VMEGGVGSWR LSEENITKQL LAAHLVAFGS BACU008133/1-1058 G--------- ---------- ---------- ---------- ---------- ENSP00000267116/1-1076 G--------- ---------- ---------- ---------- ---------- ENSBTAP00000015626/1-1076 G--------- ---------- ---------- ---------- ---------- ENSTTRP00000006727/1-1041 G--------- ---------- ---------- ---------- ---------- 551 600 bmy_03925T0/1-1183 APDSFTHPTS LLPRTPLHYA AANGSYQCAV TLVTAGAGVN EADCKGCSPL BACU008133/1-1058 ---------- ---RTPLHYA AANGSYQCAV TLVTAGAGVN EADCKGCSPL ENSP00000267116/1-1076 ---------- ---RTPLHYA AANGSYQCAV TLVTAGAGVN EADCKGCSPL ENSBTAP00000015626/1-1076 ---------- ---RTPLHYA AANGSYQCAV TLVTAGAGVN EADCKGCSPL ENSTTRP00000006727/1-1041 ---------- ---RTPLHYA AANGSYQCAV TLVTAGAGVN EADCKGCSPL 601 650 bmy_03925T0/1-1183 HYAAASDTYR RAEPHSPSSH DAEEDEPLKE SRRKEAFFCL EFLLDNGADP BACU008133/1-1058 HYAAASDTYR RAEPHSPSSH DAEEDEPLKE SRRKEAFFCL EFLLDNGADP ENSP00000267116/1-1076 HYAAASDTYR RAEPHTPSSH DAEEDEPLKE SRRKEAFFCL EFLLDNGADP ENSBTAP00000015626/1-1076 HYAAASDTYR RAEPHSPSSH DAEEDEPLKE SRRKEAFFCL EFLLDNGADP ENSTTRP00000006727/1-1041 HYAAASDTYR RAEPHSSSSH DAEEDEPLKE SRRKEAFFCL EFLLDNGADP 651 700 bmy_03925T0/1-1183 SLRDRQGYTA VHYAAAYGNR QNLELLLEMS FNCLEDVEST IPVSPLHLAA BACU008133/1-1058 SLRDRQGYTA VHYAAAYGNR QNLELLLEMS FNCLEDVEST IPVSPLHLAA ENSP00000267116/1-1076 SLRDRQGYTA VHYAAAYGNR QNLELLLEMS FNCLEDVEST IPVSPLHLAA ENSBTAP00000015626/1-1076 SLRDRQGYTA VHYAAAYGNR QNLELLLEMS FNCLEDVEST IPVSPLHLAA ENSTTRP00000006727/1-1041 SLRDRQGYTA VHYAAAYGNR QNLELLLEMS FNCLEDVEST IPVSPLHLAA 701 750 bmy_03925T0/1-1183 YNGHCEALKT LAETLVNLDV RDHKGRTALF LATERGSTEC VEVLTAHGAS BACU008133/1-1058 YNGHCEALKT LAETLVNLDV RDHKGRTALF LATERGSTEC VEVLTAHGAS ENSP00000267116/1-1076 YNGHCEALKT LAETLVNLDV RDHKGRTALF LATERGSTEC VEVLTAHGAS ENSBTAP00000015626/1-1076 YNGHCEALKT LAETLVNLDV RDHKGRTALF LATERGSTEC VEVLTTHGAS ENSTTRP00000006727/1-1041 YNGHCEALKT LAETLVNLDV RDHKGRTALF LATERGSTEC VEVLTAHGAS 751 800 bmy_03925T0/1-1183 ALIKERKRKW TPLHAAAASG HTDSLHLLID SGERADITDV MDAYGQTPLM BACU008133/1-1058 ALIKERKRKW TPLHAAAASG HTDSLHLLID SGERADITDV MDAYGQTPLM ENSP00000267116/1-1076 ALIKERKRKW TPLHAAAASG HTDSLHLLID SGERADITDV MDAYGQTPLM ENSBTAP00000015626/1-1076 ALIKERKRKW TPLHAAAASG HTDSLHLLID SGERADITDV MDAYGQTPLM ENSTTRP00000006727/1-1041 ALIKERKRKW TPLHAAAASG HTDSLHLLID SGERADITDV MDAYGQTPLM 801 850 bmy_03925T0/1-1183 LAIMNGHVDC VHLLLEKGST ADAADLRGRT ALHRGAVTGC EDCLAALLDH BACU008133/1-1058 LAIMNGHVDC VHLLLEKGST ADAADLRGRT ALHRGAVTGC EDCLAALLDH ENSP00000267116/1-1076 LAIMNGHVDC VHLLLEKGST ADAADLRGRT ALHRGAVTGC EDCLAALLDH ENSBTAP00000015626/1-1076 LAIMNGHVDC VHLLLEKGST ADAADLRGRT ALHRGAVTGC EDCLAALLDH ENSTTRP00000006727/1-1041 LAIMNGHVDC VHLLLEKGST ADAADLRGRT ALHRGAVTGC EDCLAALLDH 851 900 bmy_03925T0/1-1183 DAFVLCRDFK GRTPIHLASA CGHTAVLRTL LQAALSTDPL DTGVDYSGYS BACU008133/1-1058 DAFVLCRDFK GRTPIHLASA CGHTAVLRTL LQAALSTDPL DTGVDYSGYS ENSP00000267116/1-1076 DAFVLCRDFK GRTPIHLASA CGHTAVLRTL LQAALSTDPL DAGVDYSGYS ENSBTAP00000015626/1-1076 DAFVLCRDFK GRTPIHLASA CGHTAVLRTL LQAALSTDPL DTGVDYSGYS ENSTTRP00000006727/1-1041 DAFVLCRDFK GRTPIHLASA CGHTAVLRTL LQAALSTDPL DTGVDYSGYS 901 950 bmy_03925T0/1-1183 PMHWASYTGH EDCLELLLEH SPFSYLEGNP FTPLHCAVIN NQDSTTEMLL BACU008133/1-1058 PMHWASYTGH EDCLELLLEH SPFSYLEGNP FTPLHCAVIN NQDSTTEMLL ENSP00000267116/1-1076 PMHWASYTGH EDCLELLLEH SPFSYLEGNP FTPLHCAVIN NQDSTTEMLL ENSBTAP00000015626/1-1076 PMHWASYTGH EDCLELLLEH SPFSYLEGNP FTPLHCAVIN NQDSTTEMLL ENSTTRP00000006727/1-1041 PMHWASYTGH EDCLELLLEH SPFSYLEGNP FTPLHCAVIN NQDSTTEMLL 951 1000 bmy_03925T0/1-1183 GALGAKIVNS RDAKGRTPLH AAAFADNVSG LRMLLQHQAE VNATDHTGRT BACU008133/1-1058 GALGAKIVNS RDAKGRTPLH AAAFADNVSG LRMLLQHQAE VNATDHTGRT ENSP00000267116/1-1076 GALGAKIVNS RDAKGRTPLH AAAFADNVSG LRMLLQHQAE VNATDHTGRT ENSBTAP00000015626/1-1076 GALGAKIVNS RDAKGRTPLH AAAFADNVSG LRMLLQHQAE VNATDHTGRT ENSTTRP00000006727/1-1041 GALGAKIVNS RDAKGRTPLH AAAFADNVSG LRMLLQHQAE VNATDHTGRT 1001 1050 bmy_03925T0/1-1183 ALMTAAENGQ TAAVEFLLYR GKADLTVLDE NKNTALHLAC SKGHEKCALM BACU008133/1-1058 ALMTAAENGQ TAAVEFLLYR GKADLTVLDE NKNTALHLAC SKGHEKCALM ENSP00000267116/1-1076 ALMTAAENGQ TAAVEFLLYR GKADLTVLDE NKNTALHLAC SKGHEKCALM ENSBTAP00000015626/1-1076 ALMTAAENGQ TAAVEFLLYR GKADLTVLDE NKNTALHLAC SKGHEKCALM ENSTTRP00000006727/1-1041 ALMTAAENGQ TAAVEFLLYR GKADLTVLDE NKNTALHLAC SKGHEKCALM 1051 1100 bmy_03925T0/1-1183 ILAETQDLGL INATNSALQM PLHIAARNGL ASVVQALLSR GATVLAVDEE BACU008133/1-1058 ILAETQDLGL INATNSALQM PLHIAARNGL ASVVQALLSR GATVLAVDEE ENSP00000267116/1-1076 ILAETQDLGL INATNSALQM PLHIAARNGL ASVVQALLSH GATVLAVDEE ENSBTAP00000015626/1-1076 ILAETQDLGL INATNSALQM PLHIAARNGL ASVVQALLSR GATVLAVDEE ENSTTRP00000006727/1-1041 ILAETQDLGL INATNSALQM PLHIAARNGL ASVVQALLSR GATVLAVDEE 1101 1150 bmy_03925T0/1-1183 GHTPALACAP NKDVADCLAL ILSTMKPFPP KDAVSPFSFS LLKNCGIAAA BACU008133/1-1058 GHTPALACAP NKDVADCLAL ILSTMKPFPP KDAVSPFSFS LLKNCGIAAA ENSP00000267116/1-1076 GHTPALACAP NKDVADCLAL ILSTMKPFPP KDAVSPFSFS LLKNCSIAAA ENSBTAP00000015626/1-1076 GHTPALACAP NKDVADCLAL ILSTMKPFPP KDAVSPFSFS LLKNCGIAAA ENSTTRP00000006727/1-1041 GHTPALACAP NKDVADCLAL ILSTMKPFPP KDAVSPFSFS LLKNCGIA-- 1151 1200 bmy_03925T0/1-1183 KTVGGCGALP HGASCPYSQE RHGAIGLDGC YSE BACU008133/1-1058 KTVGGCGALP HGASCPYSQE RHGAIGLDGC YSE ENSP00000267116/1-1076 KTVGGCGALP HGASCPYSQE RPGAIGLDGC YSE ENSBTAP00000015626/1-1076 KTVGGCGALP HGASCPYSQE RHGAIGLDGC YSE ENSTTRP00000006727/1-1041 ---------- ---------- ---------- ---