KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:32 2014 Check: 00 .. Name: ENSP00000386895/1-455 Len: 462 Check: 589 Weight: 1.00 Name: ENSBTAP00000015633/1-461 Len: 462 Check: 7391 Weight: 1.00 Name: BACU001400/1-460 Len: 462 Check: 9 Weight: 1.00 Name: bmy_22224T0/1-299 Len: 462 Check: 4921 Weight: 1.00 Name: ENSTTRP00000000267/1-244 Len: 462 Check: 1300 Weight: 1.00 // 1 50 ENSP00000386895/1-455 MDETQGPLAM TVHLLANSGH GSLLQRTLDQ LLDCICPEVR LFQVSERASP ENSBTAP00000015633/1-461 MDEMPEPPAM TVHLLANAGQ GLLLQQTLDQ LLDCICPDIR LFLVSERASP BACU001400/1-460 MDETREPLAM TVHLLANSGH GSLLQQTLDQ LLDCICPEVR VFLVSERVSP bmy_22224T0/1-299 MDETREPLAM TVHLLANSGH GSLLQQTLDQ LLDCICPEVR VFLVSERVSP ENSTTRP00000000267/1-244 MDETREPPAM TVHLLANSGH GSLLQQTLDQ LLDCICPEVR VFLVSERVSP 51 100 ENSP00000386895/1-455 VKYCEKSHSK RSRFPGMSVL LFLHESPGED RLFRVLDSLQ HSPWQCYPTQ ENSBTAP00000015633/1-461 VKYYDKCHSK RSRFPGMSVL LFLKENLGEE RLFHVLDSLQ HWPWQCYPTQ BACU001400/1-460 VKYYDKCHSK RSRFPGMSVL LFLHERLGEE RLLRVLDSLQ HWPWQCYPTQ bmy_22224T0/1-299 VKYYDKCHSK RSRFPGMSVL LFLHESLGEE RLFRILDSLQ HWPWQCYPTQ ENSTTRP00000000267/1-244 VKYYDKCHSK RSRFPGMSVL LFLHESLGEE RLFRVLDSLQ HWPWQCYPTQ 101 150 ENSP00000386895/1-455 DTRGRLCPYF FANQEFYSLD SQLPIWGVRQ VHCGSEILRV TLYCSFDNYE ENSBTAP00000015633/1-461 NAQGRPCPYI LANQEFYSLD SQMPIWGVRQ VHCGTEILRV TLYCSFDNYE BACU001400/1-460 NAQGRPCPYI LANQEFYSLD NQMPVWGVRQ VHCGTEVLRV TLYCSFDNYE bmy_22224T0/1-299 NAQGRPCPYI LANQEFYSLD NQMPVWGVRQ VHCGTEVLRV TLYCSFDNYE ENSTTRP00000000267/1-244 NAQGRPCPYI LANQEFYSLD NQMPVWGVRQ VHCGTEILRV TLYCSFGNYE 151 200 ENSP00000386895/1-455 DAIRLYEMIL QREATLQKSN FCFFVLYASK SFALQLSLKQ LPPGMSVDPK ENSBTAP00000015633/1-461 DAIRLYAMIL QREATLQKSN FCFFVLYSTE TFALQLSLKQ LPLGTSVDPK BACU001400/1-460 DAIGLYEMIL QREATLQKSN FCFFALYSTE SFALQLSLKQ LPPGVSVDPK bmy_22224T0/1-299 DAIRLYEMIL QREATLQKSN FCFFALYSTE SFALQLSLKQ LPPGVSVDPK ENSTTRP00000000267/1-244 DAIRLYEMIL QREATLQKSS FCFFALYSTE SFALQLSLKQ LPPGVSVDPK 201 250 ENSP00000386895/1-455 ESSVLQFKVQ EIGQLVPLLP NPCMPISSTR WQTQDYDGNK ILLQVQLNPE ENSBTAP00000015633/1-461 EASVLQFKVQ EIGQLVPLLP HPCVPISRTR WQTQDYDGNK ILLQVQLNPG BACU001400/1-460 EASVLQFKVQ EIGQLVPLLP HPCVPISHTR WQTQDYDGNK ILLQVQLNPG bmy_22224T0/1-299 EASVLQFKVQ EIGQLVPLLP HPCVPISHTR WQTQDYDGNK ILLQAG---- ENSTTRP00000000267/1-244 EASVLQFKVQ EIGQLVPLLP HPCVPISHTR WQTQDYDGNK ILLQ------ 251 300 ENSP00000386895/1-455 LGVK------ -NGILGAGML PLGSRLTSVS AKRTSEPRSQ RNQGKRSQGH ENSBTAP00000015633/1-461 LGVRNGEPPF LNGTLGADTL PHGSRLTPVS AIRTLELRSR RIRGRRFKVS BACU001400/1-460 LGVRNGELAF LNGTSGADTL PQGSRLTPVS AIRTLEPRSR RSRGRRFKVG bmy_22224T0/1-299 ---------- ---------- PCGHQLAASS S--------- ---------- ENSTTRP00000000267/1-244 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000386895/1-455 SLELPEPSGS PTSDRCAGTS WKSPGRSFQV SSPAMGAHLH LSSHHLESGA ENSBTAP00000015633/1-461 SVELPEPGGR PVSDGSSNTW WKSAGGSAQP SSPATESQPQ LSSLHLEPGA BACU001400/1-460 SVERPEPGGR TASDSASGTS WKSHGRSAQP SSPATDSQLP LPSLHLEPGA bmy_22224T0/1-299 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000267/1-244 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000386895/1-455 RMKVLNRENS FQKLEAETNV DTGLTIINSE PRQTYFGGFP RDLQTSQPPF ENSBTAP00000015633/1-461 RMKVLGRENS FEKLEAETNV DTGFTMVSSE PRPSFASRFP RNLQTHQPPS BACU001400/1-460 RIKVLRRENS FEKQEAETNV DTGFTVVSSG PRQSFLSRFP RDLWTHQPPS bmy_22224T0/1-299 ---------- ---------- ---------- ------EDYP FEFLTLQ--- ENSTTRP00000000267/1-244 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000386895/1-455 CLPASSLGVA TSKNNSVLKE RVSPLPLAGQ RDLGTRKTIS ECLLHLQVQG ENSBTAP00000015633/1-461 CLSTSFSGSA ASKNNRIFKE RVHPLPLAGQ RDLGAKKILS KCPLPLPVQG BACU001400/1-460 CLSTSSLGAA ASKNNRIFKE SIHPLSLAGQ RDLCTRTTLS KCPLPLPAQG bmy_22224T0/1-299 -WSNRTSGLH VNRAN----- -LDPI----- -------LFS KSIIAFRGKG ENSTTRP00000000267/1-244 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000386895/1-455 EEKEEDEEEF FI ENSBTAP00000015633/1-461 EAKEA-EEEF FI BACU001400/1-460 EEKEA--EEF FI bmy_22224T0/1-299 ---------- -- ENSTTRP00000000267/1-244 ---------- --