KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:35 2014 Check: 00 .. Name: ENSP00000368244/1-677 Len: 789 Check: 3706 Weight: 1.00 Name: ENSBTAP00000015645/1-646 Len: 789 Check: 4650 Weight: 1.00 Name: ENSTTRP00000000860/1-653 Len: 789 Check: 5408 Weight: 1.00 Name: bmy_14749T0/1-743 Len: 789 Check: 4184 Weight: 1.00 Name: BACU014767/1-637 Len: 789 Check: 6519 Weight: 1.00 // 1 50 ENSP00000368244/1-677 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015645/1-646 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000860/1-653 ---------- ---------- ---------- ---------- ---------- bmy_14749T0/1-743 MRKKKNPEHQ GDWTGVNFFL LAPPPPGPPH DVRAERGGAA SWVPAPPGPA BACU014767/1-637 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000368244/1-677 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015645/1-646 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000860/1-653 ---------- ---------- ---------- ---------- ---------- bmy_14749T0/1-743 APACSLKERG LRQPRHTAGT RIQGYFPGVS SSRLPSTSAH RQPPPSSPAQ BACU014767/1-637 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000368244/1-677 ------MQPT LLLSLLGAVG LAAVNSMPVD NRNHNEGMVT RCIIEVLSNA ENSBTAP00000015645/1-646 ------MQPA ALLGLLGATV VAAVSSMPVD IRNHNEEVVT HCIIEVLSNA ENSTTRP00000000860/1-653 ------MQPA VLLGLLGATM MAAVSSMPVD IRNHSEEMVT RCIIEVLSNA bmy_14749T0/1-743 IPASRAMQPA VLLGLLGATM MAAVSSMPVD IRNHSEEMVT RCIIEVLSNA BACU014767/1-637 ------MQPA VLLGLLGATM MAAVSSVPVD IRNHSEEMVT RCIIEVLSNA 151 200 ENSP00000368244/1-677 LSKSSAPPIT PECRQVLKTS RKDVKDKETT ENENTKFEVR LLRDPADASE ENSBTAP00000015645/1-646 LLKSSAPPIT PECRQVLKKN GKELKDEEKS ENENTRFEVR LLRDPADTSE ENSTTRP00000000860/1-653 LSKSNTPPIT PECRQVLKKS GKQLKDEEKS ENENTRFEVR LLRDPADASE bmy_14749T0/1-743 LSKSNTPPIT PECRQVLKKS GKQLKDEGKS ENENTRFEVR LLRDPADASE BACU014767/1-637 LSKSNTPPIT PECRQVLKKS GKQLKDEEKS ENENTRFEVR LLRDPADASE 201 250 ENSP00000368244/1-677 AHESSSRGEA GAPGEEDIQG PTKADTEKWA EGGGHSRERA DEPQWSLYPS ENSBTAP00000015645/1-646 APGLSSREDS ---GEGDAQV PTVADT---- ESGGHSRERA GEPP------ ENSTTRP00000000860/1-653 APRTSSREDI ---GEEDAQG QTVADT---- EGGGHSRERA GEPQ------ bmy_14749T0/1-743 APRTSSREDA ---GEEDAQG QTVADT---- EGGGHSRERA GEPQ------ BACU014767/1-637 TPRTSNREDA ---GEEDAQG QTVADT---- EGGGHSRERA GEPQ------ 251 300 ENSP00000368244/1-677 DSQVSEEVKT RHSEKSQRED EEEEEGENYQ KGERGEDSSE EKHLEEPGET ENSBTAP00000015645/1-646 GSQVAKEAKT RYS-KSEGQN REEEMV-KYQ KRERGEVGSE ERLSEGPGKA ENSTTRP00000000860/1-653 GSQVAKEAKA RHSEKSKGHD REEEEAEKYQ KRERVEDGSE ERHPGGPGEA bmy_14749T0/1-743 GSQVAKEAKT RHSEKSKGHD REEEEAEEYQ KRERVEDGSE ERHPGGPGEA BACU014767/1-637 GSQVAKEAKT RHSEKSKGHD REEEEAEEYQ KRERVEDDSE ERHPGGPGEA 301 350 ENSP00000368244/1-677 QNAFLNERKQ ASAIKKEELV ARSETHAAGH SQEKTHSREK SSQESGEETG ENSBTAP00000015645/1-646 QMAFLNQRNQ TPA-KKEELV SRYDTQSAR- GLEKSHSRER SSQESGEETK ENSTTRP00000000860/1-653 QTALPSHRNQ TPA-KKEELV SRYDTQSAG- GLEKSHSRER SSQESGEETG bmy_14749T0/1-743 QTALLSHRNQ TPA-KKEELV SRYDTQSAG- GLEKSHSRER SSQESGEETG BACU014767/1-637 QTALLSHRNQ TPA-KKEELV SRYDTQSAG- GLEKSHSRER SSQESGEETG 351 400 ENSP00000368244/1-677 SQENHPQESK GQPRSQEESE EGEEDATSEV DKRRTRPRHH HGRSRPDRSS ENSBTAP00000015645/1-646 SQENWPQELQ RHPEGQEAPG ESEEDASPEV DKRRSRPRHH HGRSRPDRSS ENSTTRP00000000860/1-653 SQENGPREPQ SHPERQEGPE ESDEDVSPEA DKRRSRPRHH HGRSRPDRSS bmy_14749T0/1-743 SQENGPREPQ SHPERREGPE ESEEDVSPEV DKRRSRPRHH HGRSRPDRSS BACU014767/1-637 SQENGPREPQ SHPERREGPE ESEEDVSPEV DKRRSRPRHH HGRSRPDRSS 401 450 ENSP00000368244/1-677 QGGSLPSEEK GHPQEESEES NVSMASLGEK RDHHSTHYRA SEEEPEYGEE ENSBTAP00000015645/1-646 QEGNPPLE-- -------EES HVGTGNSDEE KARHPAHFRA LEEGAEYGEE ENSTTRP00000000860/1-653 QEGSPPAEGR GYSW---EEP HVGTGGSGEK RARHPTLSRA SEEEAEYGEE bmy_14749T0/1-743 QEGNPPPEGR GYSR---EEP HVGTAGSGEK RARHPTLSRA SEEEAEYGEE BACU014767/1-637 QEGNPPTEGR GYSR---EEP HVGTAGSGEK RARHPTLSRA SEEEAEYGEE 451 500 ENSP00000368244/1-677 IKGYPGVQAP EDLEWERYRG RGSEEYRAPR PQSEESWDEE DKRNYPSLEL ENSBTAP00000015645/1-646 VRRHSAAQAP GDLQGARFGG RGRGEHQALR RPSEESLEQE NKRHGLSPDL ENSTTRP00000000860/1-653 VRSHLAARAP GDLEGARYGG KGSEEHRAPR PHSEESPEEE DRRKGLSLEL bmy_14749T0/1-743 VRSHPAA--- ---------- ------RAPR PPSEESLEQE DRRKGLSLEL BACU014767/1-637 VRGHPAA--- ---------- ------RAPR PPSEESPEQE DRRKGLGLEL 501 550 ENSP00000368244/1-677 DKMAHGYGEE SEEERGLEPG KGRHHRGRGG EPRAYFMSDT REEKRFLGEG ENSBTAP00000015645/1-646 N-MAQGYSEE SEEERG--PA RGPSYRARGG EAAAYSTLGQ TDEKRFLGET ENSTTRP00000000860/1-653 NSMAHGYDEE SEEERG--QE GGPRHRARVG EPGAYSS--T KEEKRFLGEA bmy_14749T0/1-743 NSMAHGYDEE SEEERG--QE GGPRHRARGG EPGAYSTLHQ TEEKRFLGEA BACU014767/1-637 NSMAHGYDEE SEEERG--QE GGPRHRARGG EPGAYSTLHQ TEEKRFLGEA 551 600 ENSP00000368244/1-677 HHRVQENQMD KARRHPQGAW KELDRNYLNY ----GEEGAP GKWQQQGDLQ ENSBTAP00000015645/1-646 HHRVQESQRD KARRRLPGEL ----RNYLDY GEEKGEEAAR GKWQPQGDPR ENSTTRP00000000860/1-653 HHRVQESQTD K-RRHPPGEV ----RNYLDY DEERGEEGAR GKWPQLGDPQ bmy_14749T0/1-743 HHRAQESQTD KARRHPPGEL ----RNYLDY DEEKGEEGAR GRWPQLGDPQ BACU014767/1-637 HHRAQESQTE KARRHPPGEL ----RNYLDY DEEKGEEGAR GKWPQLGDPQ 601 650 ENSP00000368244/1-677 DTKENREEAR FQDKQYSSHH TAEKRKRLGE LFNPYYDPLQ WKSSHFERRD ENSBTAP00000015645/1-646 DADENREEAR LRGKQYAPHH ITEK--RLGE LLNPFYDPSQ WKSSRFERKD ENSTTRP00000000860/1-653 DAEENREEAR LRGKQYAPPH ITEK-ERLAE LVSPYYDPPQ WKSSRFERKD bmy_14749T0/1-743 DAEENREEAR LRGKQRAPHH ITEQ-KRLGE LASPYYGPPQ WKSSRFDRKD BACU014767/1-637 DAEENREEAR LRGKQHAPHH ITDK-KRLGE LASPYYGPPQ WKSSRFERKD 651 700 ENSP00000368244/1-677 NMNDNFLEGE EENELTLNEK NFFPEYNYDW WEKKPFSEDV NWGYEKRNLA ENSBTAP00000015645/1-646 PMDDSFLEGE EENGLTLNEK NFFPEYNYDW WEKKPFEEDV NWGYEKRNPV ENSTTRP00000000860/1-653 HLDDNSLEGE EENGLTLNEK NFFPEYNYDW WEKKPFEEDV NWGYEKRNLA bmy_14749T0/1-743 HMGDSFLEGE EENGLTLNEK NFFPEYNYDW WEKKPFEEGV NWGYEKRNLA BACU014767/1-637 HMDDSFLEGE EENGLTLNEK NFFPEYNYDW WEKKPFEEDV NWGYEKRNLA 701 750 ENSP00000368244/1-677 RVPKLDLKRQ YDRVAQLDQL LHYRKKSAEF PDFYDSEEPV STHQEAENEK ENSBTAP00000015645/1-646 --PKLDLKRQ YDRVAELDQL LHYRKKSAEF PDFYDSEEQV SPQHTAENEE ENSTTRP00000000860/1-653 --PKLDLKRQ YDRVAELDRL LHYRKKSAEF PDFYGSEEQM HRRHTAESEE bmy_14749T0/1-743 --PKLDLKRQ YDRVAELDQL LHYRKKSAEF PDFYDSEEQM GHRHAAENEE BACU014767/1-637 --PKLDLKRQ YDRVAELDQL LHYRKKSAEF PDFYDSEEQM GHRHAAENEE 751 800 ENSP00000368244/1-677 DRADQTVLTE DEKKELENLA AMDLELQKIA EKFS--QRG ENSBTAP00000015645/1-646 EKAGQGVLTE EEEKELENLA AMDLELQKIA EKFSGTRRG ENSTTRP00000000860/1-653 ERAGQGVLTE EEEKELENLA AMDLELQKIA EKFSGNRRG bmy_14749T0/1-743 ERAGQGVLTE EEEKELENLA AMDLELQKIA EKFSGNXRG BACU014767/1-637 ERAGQGVLTE EEEKELENLA AMDLELQKIA EKFSGNRRG