KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:35 2014 Check: 00 .. Name: BACU008370/1-198 Len: 232 Check: 711 Weight: 1.00 Name: ENSP00000310623/1-167 Len: 232 Check: 1183 Weight: 1.00 Name: ENSBTAP00000015648/1-167 Len: 232 Check: 1415 Weight: 1.00 Name: ENSTTRP00000003794/1-165 Len: 232 Check: 3179 Weight: 1.00 Name: bmy_08265T0/1-201 Len: 232 Check: 1109 Weight: 1.00 // 1 50 BACU008370/1-198 ---------- ---------- ---------- ----MAAAGA GRLRRATSAL ENSP00000310623/1-167 ---------- ---------- ---------- ----MAAAGA FRLRRAASAL ENSBTAP00000015648/1-167 ---------- ---------- ---------- ----MAAAGA GRLRRAASAV ENSTTRP00000003794/1-165 ---------- ---------- ---------- ----MAAAGA GRLRRATSAL bmy_08265T0/1-201 ARTLEGARSK LGADSRTRPP PRSRTRPAQA QVRKMAAAGV GRLRRAASAL 51 100 BACU008370/1-198 LPRAPRLPVR ELSAPARLYH KKVVDHYENP RNVGSLDKTS KNVGTGLVGA ENSP00000310623/1-167 LLRSPRLPAR ELSAPARLYH KKVVDHYENP RNVGSLDKTS KNVGTGLVGA ENSBTAP00000015648/1-167 LLRAPRLPAR ELSAPARLYH KKVVDHYENP RNVGSLDKTS KNVGTGLVGA ENSTTRP00000003794/1-165 LLRAPRLPVR -LSAPARLYH KKVVDHYENP -NVGSLDKTS KNVGTGLVGA bmy_08265T0/1-201 LLRAPRLPVR ELSAPARLYH KKVVDHYENP RNVGSLDKTS KNVGTGLVGA 101 150 BACU008370/1-198 PACGDVMKLQ IQVDEKGKIV DARFKTFGCG SAIASSSLAT EWVKGKTVEE ENSP00000310623/1-167 PACGDVMKLQ IQVDEKGKIV DARFKTFGCG SAIASSSLAT EWVKGKTVEE ENSBTAP00000015648/1-167 PACGDVMKLQ IQVDEKGKIV DARFKTFGCG SAIASSSLAT EWVKGKTVEE ENSTTRP00000003794/1-165 PACGDVMKLQ IQVDEKGKIV DARFKTFGCG SAIASSSLAT EWVKGKTVEE bmy_08265T0/1-201 PACGDVMKLQ IQVDEKGKIV DARFKTFGCG SAIASSSLAT EWVKGKTVEE 151 200 BACU008370/1-198 ALTIKNTDIA KELCLPPVKL HCSIYSKPDS VEIRSGQSCR RKPCHPPGEG ENSP00000310623/1-167 ALTIKNTDIA KELCLPPVKL HCSMLAE--- ---------- ---------- ENSBTAP00000015648/1-167 ALTIKNTDIA KELCLPPVKL HCSMLAE--- ---------- ---------- ENSTTRP00000003794/1-165 ALTIKNTDIA KELCLPPVKL HCSMLAE--- ---------- ---------- bmy_08265T0/1-201 ALTIKNTDIA KELCLPPVKL HCSMLAE--- ---------- ---------- 201 250 BACU008370/1-198 EQLRGNLPDP GASTKSFLLF LSSRRNPEIK TS ENSP00000310623/1-167 DAIKAALAD- -------YKL KQEPKKGEAE KK ENSBTAP00000015648/1-167 DAIKAALAD- -------YKL KQEPKTGEAE KK ENSTTRP00000003794/1-165 DAIKAALAD- -------FKL KQEPKKGEAE KK bmy_08265T0/1-201 DAIKAALAD- -------YKL KQEPKKGEVE KK