KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:41 2014 Check: 00 .. Name: ENSP00000263321/1-529 Len: 567 Check: 3879 Weight: 1.00 Name: ENSBTAP00000015679/1-530 Len: 567 Check: 7386 Weight: 1.00 Name: ENSTTRP00000002790/1-530 Len: 567 Check: 5111 Weight: 1.00 Name: bmy_17436T0/1-551 Len: 567 Check: 2183 Weight: 1.00 Name: BACU018689/1-530 Len: 567 Check: 6930 Weight: 1.00 // 1 50 ENSP00000263321/1-529 MLLAVLYCLL WSFQTSAGHF PRACVSSKNL MEKECCPPWS GDRSPCGQLS ENSBTAP00000015679/1-530 MLLAALYCLL WSFRTSAGHF PRACASSKSL TEKECCPPWA GDGSPCGRLS ENSTTRP00000002790/1-530 MLLAALYCLL WTFQTSAGHF PRACTSSKNL MEKECCPPWE GDGSPCGQLS bmy_17436T0/1-551 MLLTALYCLL WTFQTSAGHF PRACTSSKNL MEKECCPPWE GDGSPCGQLS BACU018689/1-530 MLLTALYCLL WTFQTSAGHF PRACTSSKNL MEKECCPPWE GDGSPCGQLS 51 100 ENSP00000263321/1-529 GRGSCQNILL SNAPLGPQFP FTGVDDRESW PSVFYNRTCQ CSGNFMGFNC ENSBTAP00000015679/1-530 GRGSCQDVIL STAPLGPQFP FTGVDDRESW PSIFYNRTCQ CFSNFMGFNC ENSTTRP00000002790/1-530 GRGSCQDIIL SKAPLGPQFP FAGVDDRESW PSVFYNRTCQ CFSNFMGFNC bmy_17436T0/1-551 SRGSCQDIIL SKAPLGPQFP FAGVDDRESW PSVFYNRTCQ CFGNFMGFNC BACU018689/1-530 SRGSCQDIIL SKAPLGPQFP FSGVDDRESW PSVFYNRTCQ CFGNFMGFNC 101 150 ENSP00000263321/1-529 GNCKFGFWGP NCTERRLLVR RNIFDLSAPE KDKFFAYLTL AKHTISSDYV ENSBTAP00000015679/1-530 GSCKFGFRGP RCTERRLLVR RNIFDLSVPE KNKFLAYLTL AKHTTSPDYV ENSTTRP00000002790/1-530 GNCKFGFWGP TCTERRLLVR RNIFDLSVPE KNKFLAYLTL AKHTTSADYV bmy_17436T0/1-551 GNCKFGFWGP TCTERRLLVR KNIFDLSVPE KNKFLAYLTL AKHTTSPDYV BACU018689/1-530 GNCKFGFWGP TCTERRLLVR KNIFDLSVPE KNKFLAYLTL AKHTTSPDYV 151 200 ENSP00000263321/1-529 IPIGTYGQMK NGSTPMFNDI NIYDLFVWMH YYVSMDALLG GSEIWRDIDF ENSBTAP00000015679/1-530 IPTGTYGQMN HGTTPLFNDV SVYDLFVWMH YYVSRDTLLG DSEVWRDIDF ENSTTRP00000002790/1-530 IPTGTYGQMN NGSTPLFNDI NVYDLFVWMH YYVSRDALLG GSEIWRDIDF bmy_17436T0/1-551 IPTGTYGQMN NGSTPLFNDI NVYDLFVWMH YYVSRDALLG GSEIWRDIDF BACU018689/1-530 IPTGTYGQMN NGSTPLFNDI NVYDLFVWMH YYVSRDALLG DSEIWRDIDF 201 250 ENSP00000263321/1-529 AHEAPAFLPW HRLFLLRWEQ EIQKLTGDEN FTIPYWDWRD AEKCDICTDE ENSBTAP00000015679/1-530 AHEAPGFLPW HRLFLLLWEQ EIQKLTGDEN FTIPYWDWRD AENCDVCTDE ENSTTRP00000002790/1-530 AHEAPGFLPW HRLFLLLWEK EIQKLTGDEN FTIPYWDWRD AENCDICTDE bmy_17436T0/1-551 AHEAPGFLPW HRLFLLLWEK EIQKLTRDEN FTIPYWDWRD AENCDVCTDD BACU018689/1-530 AHEAPGFLPW HRLFLLLWEK EIQKLTRDEN FTIPYWDWRD AENCDVCTDE 251 300 ENSP00000263321/1-529 YMGGQHPTNP NLLSPASFFS SWQIVCSRLE EYNSHQSLCN GTPEGPLRRN ENSBTAP00000015679/1-530 YMGGRNPANP NLLSPASFFS SWQIVCSRLE EYNSRQALCN GTSEGPLLRN ENSTTRP00000002790/1-530 YMGGRNPANP NLLSPASFFS SWQVICSQLE EYNSRHTLCN GTSEGPILRN bmy_17436T0/1-551 YMGGRNPANP NLLSPASFFS SWQVICSQLE EYNSRHALCN GTSEGPILRN BACU018689/1-530 YMGGRNPANP NLLSPASFFS SWQVICSQLE EYNSRHALCN GTSEGPILRN 301 350 ENSP00000263321/1-529 PGNHDKSRTP RLPSSADVEF CLSLTQYESG SMDKAANFSF RNTLEGFASP ENSBTAP00000015679/1-530 PGNHDKARTP RLPSSADVEF CLSLTQYESG SMDKAANFSF RNTLEGFADP ENSTTRP00000002790/1-530 PGNHDKARTP RLPSSADVEF CLSLTQYESG SMDKAANFSF RNTLEGFASP bmy_17436T0/1-551 PGNHDKARTP RLPSTADVEF CLSLTQYESG ---------- ------FASP BACU018689/1-530 PGNHDKARTP RLPSSADVEF CLSLTQYESG SMDKAANFSF RNTLEGFASP 351 400 ENSP00000263321/1-529 LTGIADASQS SMHNALHIYM NGTMSQVQGS ANDPIFLLHH AFVDS----- ENSBTAP00000015679/1-530 VTGIADASQS SMHNALHIYM NGTMSQVPGS ANDPIFLLHH AFVDS----- ENSTTRP00000002790/1-530 LTGIADASQS SMHNALHIYM NGTMSQVPGS ANDPIFLLHH AFVDS----- bmy_17436T0/1-551 LTGIADASQS SMHNALHIYM NGTMSQVPGS ANDPIFLLHH AFVDSTKYDF BACU018689/1-530 LTGIADASQS SMHNALHIYM NGTMSQVPGS ANDPIFLLHH AFVDS----- 401 450 ENSP00000263321/1-529 ---------- ---------- ---------- --IFEQWLRR HRPLQEVYPE ENSBTAP00000015679/1-530 ---------- ---------- ---------- --IFEQWLRK YHPLQDVYPE ENSTTRP00000002790/1-530 ---------- ---------- ---------- --IFEQWLRR HHPLQEVYPE bmy_17436T0/1-551 TEVSNAARFG KKCHSYEELE EIGPRSKTCE FGIFEQWLRR HHPLQEVYPE BACU018689/1-530 ---------- ---------- ---------- --IFEQWLRR HHPLQEVYPE 451 500 ENSP00000263321/1-529 ANAPIGHNRE SYMVPFIPLY RNGDFFISSK DLGYDYSYLQ DSDPDSFQDY ENSBTAP00000015679/1-530 ANAPIGHNRE SYMVPFIPLY RNGDFFISSK DLGYDYSYLQ DSEPDIFQDY ENSTTRP00000002790/1-530 ANAPIGHNRE SYMVPFIPLY RNGDFFISSR DLGYDYSYLQ DSGPDSFQDY bmy_17436T0/1-551 ANAPIGHNRE SYMVPFIPLY RNGDFFISSR DLGYDYSYLQ DSGPDSFQDY BACU018689/1-530 ANAPIGHNRE SYMVPFIPLY RNGDFFISSR DLGYDYSYLQ DSGPDSFQDY 501 550 ENSP00000263321/1-529 IKSYLEQASR IWSWLLGAAM VGAVLTALLA GLVSLLCRHK RKQLPEEKQP ENSBTAP00000015679/1-530 IKPYLEQAQR IWPWLIGAAV VGSVLTAVLG GLTSLLCRRK RNQLPEEKQP ENSTTRP00000002790/1-530 IKPYLQQASQ IWPWLIGAAM VGSVLTAVLG GLTSLLCHRK RKQLPEEKQP bmy_17436T0/1-551 IKPYLEQASR IWPWLIGAAV VGSVLTAVLG GLSSLLCHRK RKQLPEEKQP BACU018689/1-530 IKPYLEQASQ IWPWLIGAAV VGSVLTAVLG GLTSLLCHRK RKQLPEEKQP 551 600 ENSP00000263321/1-529 LLMEKEDYHS L-YQSHL ENSBTAP00000015679/1-530 LLMEKEDYHN LMYQSHL ENSTTRP00000002790/1-530 LLMDKEDYHS LLYQSHL bmy_17436T0/1-551 LLMDKEDHHS LLYQSQL BACU018689/1-530 LLMDKEDHHS LLYQSQL