KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:56:42 2014  Check: 00 ..

 Name: ENSTTRP00000000547/1-313  Len:    313  Check:  7244  Weight:  1.00
 Name: ENSP00000199320/1-313     Len:    313  Check:  9602  Weight:  1.00
 Name: bmy_10700T0/1-270         Len:    313  Check:  1104  Weight:  1.00
 Name: ENSBTAP00000015680/1-313  Len:    313  Check:  9906  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000000547/1-313  MPKIKAGASG RCRERQQQRR ELKSAGGLMF NTGIGQHVLK NPLIVNSIID 
ENSP00000199320/1-313     MPKVKSGAIG RRRGRQEQRR ELKSAGGLMF NTGIGQHILK NPLIINSIID 
bmy_10700T0/1-270         MPKIKSGASG RCRERQQQRR ELKSGGGLTF NTGIGQHVLK NPLIVNSIID 
ENSBTAP00000015680/1-313  MPKIKSAASG RRRERQQQRG QLKSAGGLMF NTGIGQHILK NPLIVNSIID 


                          51                                                 100
ENSTTRP00000000547/1-313  KAALRPTDVV LEVGPGTGNM TVKLLEKAKK VIACELDVRL VAELHKRVQG 
ENSP00000199320/1-313     KAALRPTDVV LEVGPGTGNM TVKLLEKAKK VVACELDPRL VAELHKRVQG 
bmy_10700T0/1-270         KAALRPTDVV LEVGPGTGNM TVKLLEKAKK VIACELDLRL VAELHKRVQG 
ENSBTAP00000015680/1-313  KAALRPTDVV LEVGPGTGNM TVKLLEKAKK VIACELDPRL VAELHKRVQG 


                          101                                                150
ENSTTRP00000000547/1-313  TPLASKLQVM VGDVLKTDLP FFDACVANLP YQISSPFVFK LLLHRPFFXX 
ENSP00000199320/1-313     TPVASKLQVL VGDVLKTDLP FFDTCVANLP YQISSPFVFK LLLHRPFFRC 
bmy_10700T0/1-270         TPLAXKLQVM VGDVLKTDLP FFDACVANLP YQISSPFVFK LLLHRPFFRC 
ENSBTAP00000015680/1-313  TPLASKLQVM VGDVLKADLP FFDACVANLP YQISSPFVFK LLLHRPFFRC 


                          151                                                200
ENSTTRP00000000547/1-313  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
ENSP00000199320/1-313     AILMFQREFA LRLVAKPGDK LYCRLSINTQ LLARVDHLMK VGKNNFRPPP 
bmy_10700T0/1-270         AVLMFQREFA LRLVAKPGDK LYCRLSINTQ LLARVDHLMK VGKNNFRPPP 
ENSBTAP00000015680/1-313  AVLMFQREFA LRLVAKPGDK LYCRLSINTQ LLARVDHLMK VGKNNFRPPP 


                          201                                                250
ENSTTRP00000000547/1-313  XXXXXXXXXX XXXXXXXXXX XEWDGLVRIT FVRKNKTLSA AFKSSAVQQL 
ENSP00000199320/1-313     KVESSVVRIE PKNPPPPINF QEWDGLVRIT FVRKNKTLSA AFKSSAVQQL 
bmy_10700T0/1-270         KVESSVVRIE PKNPPPPINF Q--------- ---------- ---------- 
ENSBTAP00000015680/1-313  KVESSVVRIE PKNPPPPINF QEWDGLVRIT FVRKNKTLSA AFKSSAVQQL 


                          251                                                300
ENSTTRP00000000547/1-313  LEKNYRIHCS VHNIIIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR 
ENSP00000199320/1-313     LEKNYRIHCS VHNIIIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR 
bmy_10700T0/1-270         ---------- ----IIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR 
ENSBTAP00000015680/1-313  LEKNYRIHCS VHNIIIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR 


                          301                                                350
ENSTTRP00000000547/1-313  LLHGFNAEGI HFS 
ENSP00000199320/1-313     LLHGFNAEGI HFS 
bmy_10700T0/1-270         LLHGFNAEGI HFS 
ENSBTAP00000015680/1-313  LLHGFNAEGI HFS