KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:56:43 2014  Check: 00 ..

 Name: BACU019020/1-101          Len:    180  Check:  722  Weight:  1.00
 Name: ENSTTRP00000005149/1-99   Len:    180  Check:  2458  Weight:  1.00
 Name: bmy_04873T0/1-178         Len:    180  Check:  5199  Weight:  1.00
 Name: ENSBTAP00000015695/1-180  Len:    180  Check:  5648  Weight:  1.00
 Name: ENSP00000242784/1-176     Len:    180  Check:  5686  Weight:  1.00

//


                          1                                                   50
BACU019020/1-101          MAARGRRVEP PGREAPGPA- -GGGGSESQW AE-------- ---------- 
ENSTTRP00000005149/1-99   MAARGRRAEP PGREAPGPA- -GGAGRGSE- -E-------- ---------- 
bmy_04873T0/1-178         MAARGRRAEP PGREAPGPA- -GGGGGGSRW AESGPGTSPE SGDDEVSGAG 
ENSBTAP00000015695/1-180  MAARGRRAEP PGREAPGPAG GGGGGGGSRW AESGPGTSPE SGDDEVSGAG 
ENSP00000242784/1-176     MAARGRRAEP QGREAPGPA- -GGGGGGSRW AESGSGTSPE SGDEEVSGAG 


                          51                                                 100
BACU019020/1-101          ---------- ---------- ---------- -------PGP RTP------- 
ENSTTRP00000005149/1-99   ---------- ---------- ---------- -------EGR --P------- 
bmy_04873T0/1-178         SSPVSGGVNL FANDGSFLEL FKRKMEEEQR QRQEEPPPGP QRPDQPATAA 
ENSBTAP00000015695/1-180  SSPVSGGVNL FANDGSFLEL FKRKMEEEQR QRQEEPPPGP QRPDQPATAA 
ENSP00000242784/1-176     SSPVSGGVNL FANDGSFLEL FKRKMEEEQR QRQEEPPPGP QRPDQ--SAA 


                          101                                                150
BACU019020/1-101          ---------- ---GPTLSFM GKRRGGNKLA LKTGIAAKK- KTENEVLTSK 
ENSTTRP00000005149/1-99   ---------- ---GPTLSFV GKRRGGNKLA LKTGIVAKKQ KTEDEVLTSK 
bmy_04873T0/1-178         AAGPGDPKRK GGPGPTLSFV GKRRGGNKLA LKTGIVAKKQ KTEDEVLTSK 
ENSBTAP00000015695/1-180  AAGPGDPKRK GGPGPTLSFV GKRRGGNKLA LKTGIVAKKQ KTEDEVLTSK 
ENSP00000242784/1-176     AAGPGDPKRK GGPGSTLSFV GKRRGGNKLA LKTGIVAKKQ KTEDEVLTSK 


                          151                                                200
BACU019020/1-101          GDAWANYMAE VKNYK-HQCR DDDKTQPLMK 
ENSTTRP00000005149/1-99   GDAWAKYMAE VKKYKAHQCG DDDKTRPLVK 
bmy_04873T0/1-178         GDAWAKYMAE VKKYKAHQCG DDDKTRPLVK 
ENSBTAP00000015695/1-180  GDAWAKYMAE VKKYKAHQCG DDDKTRPLVK 
ENSP00000242784/1-176     GDAWAKYMAE VKKYKAHQCG DDDKTRPLVK