KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:43 2014 Check: 00 .. Name: ENSP00000343126/1-560 Len: 572 Check: 9308 Weight: 1.00 Name: bmy_11972T0/1-360 Len: 572 Check: 3897 Weight: 1.00 Name: ENSBTAP00000015698/1-553 Len: 572 Check: 8024 Weight: 1.00 Name: BACU017913/1-571 Len: 572 Check: 8872 Weight: 1.00 Name: ENSTTRP00000007547/1-566 Len: 572 Check: 4092 Weight: 1.00 // 1 50 ENSP00000343126/1-560 MEPLQQQQQQ ---------- -QQQQQKQPH LAPLQMDARE KQGQQMREAQ bmy_11972T0/1-360 ---------- ---------- ---------- ---------- -------MNV ENSBTAP00000015698/1-553 MEPLHPQQKQ ---------- --PPPPQPPH LAPLQMDARE KQGQQMRETP BACU017913/1-571 MEPLQPQQKQ PQPQPPPQQP PPPPPPQPPH LAPLQMDARE KQVQQMRGTP ENSTTRP00000007547/1-566 MEPLQPQQKQ ---QPPQQQ- -PPPPPQPPH LAPLQMDARE KQVQQMRETP 51 100 ENSP00000343126/1-560 FLYAQKLVTQ PTLLSATAGR PSGSTPLGPL ARVPPTAAVA QVFERGNMNS bmy_11972T0/1-360 FPTQQKVGIH RCLLSL---- ---------- ---------- ---------- ENSBTAP00000015698/1-553 FLYAQKLVTQ QTHLSATPGR PSGSPALGPS ARVPPATAVA RVFERSKVNS BACU017913/1-571 FLYAQKLVTQ QTHLSATPGR PSGSPALGPL ARVPPAPAVA RVFERSKVNS ENSTTRP00000007547/1-566 FLYAQKLVTQ QTHLSATPGR PSGSPALGPL ARVPPAPAVA RVFERSKVNS 101 150 ENSP00000343126/1-560 EPEEEDGGLE DEDGDDEVAE VAEKETQAAS KYFHVQKVAR QDPRVAPMSN bmy_11972T0/1-360 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015698/1-553 EPEEEEGGLE GEDGDDE-AE VAEKQTQAAS KYFHVQKVAR QDPRAAPLPG BACU017913/1-571 EREEEEGVLE DEDGDDEVAE VAEKETQAAS KYFHVQKVAR QDPRAAPVSG ENSTTRP00000007547/1-566 EPEKEEGGLE DEDGDDEVAE VAEKETQAAS KYFHVQKVAR QDPRAAPVSG 151 200 ENSP00000343126/1-560 LLPAPGLPPH GQQAKEDHTK DASKASPSVS TAGQPNWNLD EQLKQNGGLA bmy_11972T0/1-360 ---------H GND------- ------TTLC ---------- ---------- ENSBTAP00000015698/1-553 LLPAPGLAPH GQQAKEDRTK DASKTSASVS AAGQPGWNRD EQLKQNGGLA BACU017913/1-571 LLPAPGLPPH GQQAKEDHTK DAPKASASVC TAGQPGWNPD EQLKQNGGLA ENSTTRP00000007547/1-566 LLPAPGLPPH GQQAKEDHTK DAPKASASVS TAGQPGWNLD EQLKQNGGLA 201 250 ENSP00000343126/1-560 WSDDADGGRG REISRDFAKL YELDGDPERK EFLDDLFVFM QKRGTPINRI bmy_11972T0/1-360 ---------- ---------- ---------- ------FSLR TITGTPINRI ENSBTAP00000015698/1-553 WSDDADGGRG REISRDFAKL YELDSDPERK EFLDDLFVFM QKRGTPINRI BACU017913/1-571 WSDDADGGRG REISRDFAKL YELDSDPERK EFLDDLFVFM QKRGTPINRI ENSTTRP00000007547/1-566 WSDDADGGRG REISRDFAKL YELDSDPERK EFLDDLFVFM QKRGTPINRI 251 300 ENSP00000343126/1-560 PIMAKQILDL YMLYKLVTEK GGLVEIINKK IWREITKGLN LPTSITSAAF bmy_11972T0/1-360 PIMAKQILDL YMLYKLVTEK GGLVEIINKK IWREITKGLN LPTSITSAAF ENSBTAP00000015698/1-553 PIMAKQILDL YMLYKLVTEK GGLVEIINKK IWREITKGLN LPTSITSAAF BACU017913/1-571 PIMAKQILDL YMLYKLVTEK GGLVEIINKK IWREITKGLN LPTSITSAAF ENSTTRP00000007547/1-566 PIMAKQILDL YMLYKLVTEK GGLVEIINKK IWREITKGLN LPTSITSAAF 301 350 ENSP00000343126/1-560 TLRTQYMKYL YAYECEKKAL SSPAELQAAI DGNRREGRRP SYSSSLFGYS bmy_11972T0/1-360 TLRTQYMKYL YAYECEKKAL SSPAELQAAI DGNRREGRRP SYSSSLFGYS ENSBTAP00000015698/1-553 TLRTQYMKYL YAYECEKKAL SSPAELQAAI DGNRREGRRP SYSSSLFGYS BACU017913/1-571 TLRTQYMKYL YAYECEKKAL SSPAELQAAI DGNRREGRRP SYSSSLFGYS ENSTTRP00000007547/1-566 TLRTQYMKYL YAYECEKKAL SSPAELQAAI DGNRREGRRP SYSSSLFGYS 351 400 ENSP00000343126/1-560 PAAATAAAAA GAPALLSPPK IRFPILGLGS SSGTNTSSPR ISPATTLRKG bmy_11972T0/1-360 PAA---ASAA GAPALLSPPK IRFPILGLGS GSGTNASGPR ISPATTLRKG ENSBTAP00000015698/1-553 P-----TAAA GAPALLSPPK IRFPILGLGS SGGTSASGSR ISPAAPLRKG BACU017913/1-571 PAAAS-AAAA GAPALLSPPK IRFPILGLGS GSGTNASGPR ISPATTLRKG ENSTTRP00000007547/1-566 PAAAS-AAAA GAPALLSPPK IRFPILGLGS GSGTNASGPR ISPATTLRKG 401 450 ENSP00000343126/1-560 DGAPVTTVPV PNRLAVPVTL ASQQAGTRTA ALEQLRERLE SGEPAEKKAS bmy_11972T0/1-360 DGVPVTTVPV PNRLAVPVTL ASQQAGTRTA TLEQLRERLE SGEPPEKKAS ENSBTAP00000015698/1-553 DGVPVTTVPV PNRLAVPVTL AGQQASTRTA TLEQLRERLE SGEPPEKKVS BACU017913/1-571 DGVPVTTVPV PNRLAVPVTL ASQQAGTRTA TLEQLRERLE SGEPPEKKAS ENSTTRP00000007547/1-566 DGVPVTTVPV PNRLAVPVTL ASQQAGTRTA TLEQLRERLE SGEPPEKKAS 451 500 ENSP00000343126/1-560 RLSEEEQRLV QQAFQRNFFS MARQLPMKIR INGR-EDRAE ASAAALNLTT bmy_11972T0/1-360 RLSEEEQRLV QQAFQRNFFS MARQLPMKIR INGRAEDRAE ASAAALNLTT ENSBTAP00000015698/1-553 RLSEEEQRLV QQAFQRNLFN MARQLPMKIR INGR-EDRAE ASAAALNLTT BACU017913/1-571 RLSEEEQRLV QQAFQRNFFS MARQLPMKIR INGRAEDRAE ASAAALNLTT ENSTTRP00000007547/1-566 RLSEEEQRLV QQAFQRNFFS MARQLPMKIR INGRAEDRAE ASAAAVNLTT 501 550 ENSP00000343126/1-560 SSIGSINMSV DIDGTTYAGV LFAQKPVVHL ITGSAPQSLG SSASSSSSSH bmy_11972T0/1-360 SSIGSINMSV DIDGTTYAGV LFAQKPVVHL IAGSAPQSIG SSASSSSSSH ENSBTAP00000015698/1-553 SSIGSISMSV DIDGTTYAGV LFAQKPAVHL ITGSAPQSIG SSSSSSSSSH BACU017913/1-571 SSIGSINMSV DIDGTTYAGV LFAQKPVVHL IAGSAPQSIG SSASSSSSSH ENSTTRP00000007547/1-566 SSIGSINMSV DIDGTTYAGV LFAQKPVVHL IAGSAPQSIG SSASSSSSSH 551 600 ENSP00000343126/1-560 CSPSPTSSRG TPSAEPSTSW SL bmy_11972T0/1-360 CSPSPTSSRG TPSAEPSTSW SL ENSBTAP00000015698/1-553 CSPSPTSSRG TPSAEPSTSW SL BACU017913/1-571 CSPSPTSSRG TPSAEPSTSW SL ENSTTRP00000007547/1-566 CSPSPTSSRG TPSAEPSTSW SL