KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:46 2014 Check: 00 .. Name: ENSTTRP00000009174/1-489 Len: 609 Check: 4811 Weight: 1.00 Name: ENSP00000322706/1-520 Len: 609 Check: 6533 Weight: 1.00 Name: ENSBTAP00000015713/1-565 Len: 609 Check: 6609 Weight: 1.00 Name: bmy_08135T0/1-609 Len: 609 Check: 7957 Weight: 1.00 Name: BACU016718/1-520 Len: 609 Check: 8583 Weight: 1.00 // 1 50 ENSTTRP00000009174/1-489 ---------- ---------- ---------- ---------- ---------- ENSP00000322706/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015713/1-565 ---------- --HYPFVGRS LSTATARSYL G--------- ---------- bmy_08135T0/1-609 TRENPSECPP PVSFGLVETG LGGGRYRPTL PATIGCWGHG PASHRLRAVP BACU016718/1-520 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009174/1-489 ---------- ---------- ---------- ---------M PGSLPLNTEA ENSP00000322706/1-520 ---------- ---------- ---------- ---------M PGSLPLNAEA ENSBTAP00000015713/1-565 ---------- VPDGRRYQLI TRTETTTVRA NK---SSFTM PGSLPLNAEA bmy_08135T0/1-609 ESGGSAAIKL VAEGRRRGLH LRWSLLFHGH RPLTFRSFTM PGSLPLNAEA BACU016718/1-520 ---------- ---------- ---------- ---------M PGSLPLNAEA 101 150 ENSTTRP00000009174/1-489 CWPKDVGIVA LEIYFPSQYV DQAELEKYDG VDAGKYTIGL GQAKMGFCTD ENSP00000322706/1-520 CWPKDVGIVA LEIYFPSQYV DQAELEKYDG VDAGKYTIGL GQAKMGFCTD ENSBTAP00000015713/1-565 CWPKDVGIVA LEIYFPSQYV DQAELEKYDG VDAGKYTIGL GQAKMGFCTD bmy_08135T0/1-609 CWPKDVGIVA LEIYFPSQYV DQAELEKYDG VDAGKYTIGL GQAKMGFCTD BACU016718/1-520 CWPKDVGIVA LEIYFPSQYV DQAELEKYDG VDAGKYTIGL GQAKMGFCTD 151 200 ENSTTRP00000009174/1-489 REDINSLCMT VVQNLMERNS LSYDCIGRLE VGTETIIDKS KSVKTNLMQL ENSP00000322706/1-520 REDINSLCMT VVQNLMERNN LSYDCIGRLE VGTETIIDKS KSVKTNLMQL ENSBTAP00000015713/1-565 REDINSLCMT VVQNLMERNS LSYDCIGRLE VGTETIIDKS KSVKTNLMQL bmy_08135T0/1-609 REDINSLCMT VVQNLMERNS LSYDCIGRLE VGTETIIDKS KSVKTNLMQL BACU016718/1-520 REDINSLCMT VVQNLMERNS LSYDCIGRLE VGTETIIDKS KSVKTNLMQL 201 250 ENSTTRP00000009174/1-489 FEESGNTDIE -IDTTNACYG GTAAVFNAVN WIESSS-DGR YAMVVAGDIA ENSP00000322706/1-520 FEESGNTDIE GIDTTNACYG GTAAVFNAVN WIESSSWDGR YALVVAGDIA ENSBTAP00000015713/1-565 FEESGNTDIE GIDTTNACYG GTAAVFNAVN WIESSSWDGR YALVVAGDIA bmy_08135T0/1-609 FEESGNTDIE GIDTTNACYG GTAAVFNAVN WIESSSWDGR YAMVVAGDIA BACU016718/1-520 FEESGNTDIE GIDTTNACYG GTAAVFNAVN WIESSSWDGR YAMVVAGDIA 251 300 ENSTTRP00000009174/1-489 VYATGNARPT GGVGAVAMLI GPNAPLIFER XXXXXXXXXX XXXXXXXXXX ENSP00000322706/1-520 VYATGNARPT GGVGAVALLI GPNAPLIFER GLRGTHMQHA YDFYKPDMLS ENSBTAP00000015713/1-565 VYATGNARPT GGVGAVAMLI GPNAPLIFER GLRGTHMQHA YDFYKPDMLS bmy_08135T0/1-609 VYATGNARPT GGVGAVAMLI GPNAPLIFER GLRGTHMQHA YDFYKPDMLS BACU016718/1-520 VYATGNARPT GGVGAVAMLI GPNAPLIFER GLRGTHMQHA YDFYKPDMLS 301 350 ENSTTRP00000009174/1-489 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGNDR DFTLNDFGFM ENSP00000322706/1-520 EYPIVDGKLS IQCYLSALDR CYSVYCKKIH AQWQKEGNDK DFTLNDFGFM ENSBTAP00000015713/1-565 EYPIVDGKLS IQCYLSALDR CYSVYRKKIR ARWQKEGNDR DFTLNDFGFM bmy_08135T0/1-609 EYPIVDGKLS IQCYLSALDR CYSVYRKKIY AQWQKEGNDR DFTLNDFGFM BACU016718/1-520 EYPIVDGKLS IQCYLSALDR CYSVYRKKIY AQWQKEGNDR DFTLNDFGFM 351 400 ENSTTRP00000009174/1-489 IFHSPYCKLV QKSVARMLLN DFLNDQNRDK NSIYSGLEAF GDVKLEDTYF ENSP00000322706/1-520 IFHSPYCKLV QKSLARMLLN DFLNDQNRDK NSIYSGLEAF GDVKLEDTYF ENSBTAP00000015713/1-565 IFHSPYCKLV QKSLARMLLN DFLNDQNRDK NSIYSGLEAF GDVKLEDTYF bmy_08135T0/1-609 IFHSPYCKLV QKSVARMLLN DFLNDQNRDK NSIYSGLEAF GDVKLEDTYF BACU016718/1-520 IFHSPYCKLV QKSVARMLLN DFLNDQNRDK NSIYSGLEAF GDVKLEDTYF 401 450 ENSTTRP00000009174/1-489 DRDVEKAFMK ASSELFNQKT KASLLVSNQN GNMYTSSVYG SLASVLAQYS ENSP00000322706/1-520 DRDVEKAFMK ASSELFSQKT KASLLVSNQN GNMYTSSVYG SLASVLAQYS ENSBTAP00000015713/1-565 DRDVEKAFMK ASSELFNQKT KASLLVSNQN GNMYTSSVYG SLASVLAQYS bmy_08135T0/1-609 DRDVEKAFMK ASSELFNQKT KASLLVSNQN GNMYTSSVYG SLASVLAQYS BACU016718/1-520 DRDVEKAFMK ASSELFNQKT KASLLVSNQN GNMYTSSVYG SLASVLAQYS 451 500 ENSTTRP00000009174/1-489 PQQLAGKRIG VFSYGSGLAA TLYSLRVTQD ATPGSALDKI IASLCDLKSR ENSP00000322706/1-520 PQQLAGKRIG VFSYGSGLAA TLYSLKVTQD ATPGSALDKI TASLCDLKSR ENSBTAP00000015713/1-565 PQQLAGKRIG VFSYGSGLAA TLYSLKVTQD ATPGSALDKI VASICDLKSR bmy_08135T0/1-609 PQQLAGKRIG VFSYGSGLAA TLYSLKVTQD ATPGSALDKI IASLCDLKSR BACU016718/1-520 PQQLAGKRIG VFSYGSGLAA TLYSLKVTQD ATPGSALDKI IASLCDLKSR 501 550 ENSTTRP00000009174/1-489 LDSRTCVAPD VFAENMKLRE DTHHLVSYIP QSSIDSLFEG TWYLVRVDEK ENSP00000322706/1-520 LDSRTGVAPD VFAENMKLRE DTHHLVNYIP QGSIDSLFEG TWYLVRVDEK ENSBTAP00000015713/1-565 LDSRTCVAPD IFAENMKLRE DTHHLANYIP QSSIDSLFEG TWYLVRVDEK bmy_08135T0/1-609 LDSRTCVAPD VFAENMKLRE DTHHLVSYIP QSSIDSLFEG TWYLVRVDEK BACU016718/1-520 LDSRTCVAPD VFAENMKLRE DTHHLVSYIP QSSIDSLFEG TWYLVRVDEK 551 600 ENSTTRP00000009174/1-489 HRRTYARRPS PNDDTLDEGV GLVHSSTATE ---------- ---------- ENSP00000322706/1-520 HRRTYARRPT PNDDTLDEGV GLVHSNIATE HIPSPAKKVP RLPATAAEPE ENSBTAP00000015713/1-565 HRRTYARRPS LNDDTLNEGV GLVHPSTTAE HIPSPAKKVP RLPATAAEPE bmy_08135T0/1-609 HRRTYARRPS PNDDTLDEGV GLVHSSTATE HIPSPAKKVP RLPATAAEPE BACU016718/1-520 HRRTYARRPS LNDDTLDEGV GLVHSSTATE HIPSPAKKVP RLPATAAEPE 601 650 ENSTTRP00000009174/1-489 --------- ENSP00000322706/1-520 AAVISNGEH ENSBTAP00000015713/1-565 AAVISNGEH bmy_08135T0/1-609 AAVISNGEH BACU016718/1-520 AAVISNGEH