KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:47 2014 Check: 00 .. Name: bmy_15122T0/1-522 Len: 539 Check: 1018 Weight: 1.00 Name: ENSBTAP00000015716/1-440 Len: 539 Check: 5360 Weight: 1.00 Name: ENSP00000331901/1-437 Len: 539 Check: 8686 Weight: 1.00 Name: ENSTTRP00000002304/1-436 Len: 539 Check: 5567 Weight: 1.00 Name: BACU005376/1-437 Len: 539 Check: 8030 Weight: 1.00 // 1 50 bmy_15122T0/1-522 MSSPPVLEER DFNQLTVWDS IYSQVEIILS TASQLAMKGA SKSIFVWISS ENSBTAP00000015716/1-440 ---------- ---------- ---------- --------MA AGTLYTY--- ENSP00000331901/1-437 ---------- ---------- ---------- --------MA AGTLYTY--- ENSTTRP00000002304/1-436 ---------- ---------- ---------- ---------A VGTLYTY--- BACU005376/1-437 ---------- ---------- ---------- --------MA AGTLYTY--- 51 100 bmy_15122T0/1-522 RLRKPTAKAK PTSKGKDIFQ IVMTPDYISK FFSPNLDVAH VDFHLKSNHH ENSBTAP00000015716/1-440 ---------- ---------- ---------- ---------- ---------- ENSP00000331901/1-437 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002304/1-436 ---------- ---------- ---------- ---------- ---------- BACU005376/1-437 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_15122T0/1-522 GGWDLGHISE NWSAFKAFTA AQYSGAQVCV LFAPPHFYFG QTNCTPEFLG ENSBTAP00000015716/1-440 --------PE NWRAFKALIA AQYSGAQVRV LSAPPHFHFG QTNRTPEFLR ENSP00000331901/1-437 --------PE NWRAFKALIA AQYSGAQVRV LSAPPHFHFG QTNRTPEFLR ENSTTRP00000002304/1-436 --------PE NWRAFKALIA AQYSGAQVRV LSAPPHFHFG QTNRTPEFLR BACU005376/1-437 --------PE NWRAFKALIA AQYSGAQVRV LSAPPHFHFG QTNRTPEFLR 151 200 bmy_15122T0/1-522 KFPAGKVPAF EGDDGFCVFE SNAIAYYVSN EELRRSIPEA AAQVVQWVSF ENSBTAP00000015716/1-440 KFPAGKVPAF EGDDGFCVFE SNAIAYYVSN EELRGSTPEA AAQVVQWVSF ENSP00000331901/1-437 KFPAGKVPAF EGDDGFCVFE SNAIAYYVSN EELRGSTPEA AAQVVQWVSF ENSTTRP00000002304/1-436 KFPAGKVPAF EGDDGFCVFE SNAIAYYVSN EELRGSTPEA AAQVVQWVSF BACU005376/1-437 KFPAGKVPAF EGDDGFCVFE SNAIAYYVSN EELRGSTPEA AAQVVQWVSF 201 250 bmy_15122T0/1-522 ADNDVVPPAS TWVFPTLGIM HHNKQVTENA KEVVRQIMGL LDAHLKTRTF ENSBTAP00000015716/1-440 ADSDIVPPAS TWVFPTLGIM HHNKQATENA KEEVRRILGL LDAHLKTRTF ENSP00000331901/1-437 ADSDIVPPAS TWVFPTLGIM HHNKQATENA KEEVRRILGL LDAYLKTRTF ENSTTRP00000002304/1-436 ADSDIVPPAS TWVFPTLGIM HHSKQATENA KEEVRRILGL LDAHLKTRTF BACU005376/1-437 ADSDIVPPAS TWVFPTLGIM HHNKQATENA KEEVRRILGL LDAHLKTRTF 251 300 bmy_15122T0/1-522 LVGERVTLAD ITVVCTLLWL YKQVLEPSFY QPFPNTNRWL LTCIHQPQFW ENSBTAP00000015716/1-440 LVGERVTLAD ITVVCTLLWL YKQVLEPSFR QAFPNTNRWF LTCINQPQFR ENSP00000331901/1-437 LVGERVTLAD ITVVCTLLWL YKQVLEPSFR QAFPNTNRWF LTCINQPQFR ENSTTRP00000002304/1-436 LVGERVTLAD ITLVCTLLWL YKQVLEPSFR QAFPNTNRWF LTCINQPQFR BACU005376/1-437 LVGERVTLAD ITVVCTLLWL YKQVLEPSFR QAFTNTNRWF LTCINQPQFR 301 350 bmy_15122T0/1-522 AVLGE----- ---------F AESQPKKDTP RKEKASREEK QKPQAEQ--- ENSBTAP00000015716/1-440 AVLGEVKLCE KMAQFDAKKF AESQPKKDTP RKEKGSREEK LKPQAERKEG ENSP00000331901/1-437 AVLGEVKLCE KMAQFDAKKF AETQPKKDTP RKEKGSREEK QKPQAER--- ENSTTRP00000002304/1-436 AVLGEVKLCE KMAQFDAKKF AESQPKKDTP RKEKASREEK QKPQAER--- BACU005376/1-437 AVLGEVKLCE KMAQFDAKKF AESQPKKDTP RKEKASREEK QKPQAER--- 351 400 bmy_15122T0/1-522 KEEKKTAAPA TEEELDECEQ SLAAEQKAKD PFAHLPKSTF VLDEFKRKYS ENSBTAP00000015716/1-440 KEEKKAAAPA PEEELDECEQ ALAAEPKAKD PFAHLPKSTF VLDEFKRKYS ENSP00000331901/1-437 KEEKKAAAPA PEEEMDECEQ ALAAEPKAKD PFAHLPKSTF VLDEFKRKYS ENSTTRP00000002304/1-436 KEEKKAAAPA PEEELDECEQ ALAAEPKAKD PFAHLPKSTF VLDEFKRKYS BACU005376/1-437 KEEKKAAAPA PEEELDECEQ ALAAEPKAKD PFAHLPKSTF VLDEFKRKYS 401 450 bmy_15122T0/1-522 NEDTLSVVLP YFWEHFDKNG WSLWYSDYCF PEELTQTFIS CNFLNGMFQR ENSBTAP00000015716/1-440 NEDTLSVALP YFWDHFDKDG WSLWYSEYRF PEELTQTFMS CNLITGMFQR ENSP00000331901/1-437 NEDTLSVALP YFWEHFDKDG WSLWYSEYRF PEELTQTFMS CNLITGMFQR ENSTTRP00000002304/1-436 NEDTLSVALP YFWEHFDKDG WSLWYSEYRF PEELTQTFMS CNLITGMFQR BACU005376/1-437 NEDTLSVALP YFWEHFDKDG WSLWYSDYRF PEELSQTFMS CNLITGMFQR 451 500 bmy_15122T0/1-522 LDKLKKNAFA SVILFGTNNS SSISGVWVFR GQELAFPLSP DWQVDYESYT ENSBTAP00000015716/1-440 LDKLRKNAFA SVILFGTNNS SSISGVWVFR GQELAFPLSP DWQVDYESYT ENSP00000331901/1-437 LDKLRKNAFA SVILFGTNNS SSISGVWVFR GQELAFPLSP DWQVDYESYT ENSTTRP00000002304/1-436 LDKLRKNAFA SVILFGTNNS SSISGVWVFR GQELAFPLSP DWQVDYESYT BACU005376/1-437 LDKLRKNAFA SVILFGTNNS SSISGVWVFR GQELAFPLSP DWQVDYESYT 501 550 bmy_15122T0/1-522 WRKLDPSSED TQPLVQEYFS WDGVFQHVGK AFNQGKIFK ENSBTAP00000015716/1-440 WRKLDPGSEE TQTLVREYFC WEGAFQHVGK AFNQGKIFK ENSP00000331901/1-437 WRKLDPGSEE TQTLVREYFS WEGAFQHVGK AFNQGKIFK ENSTTRP00000002304/1-436 WRKLDPSSEE TQTLVREYFS WDGAFQHVGK AFNQGKIFK BACU005376/1-437 WRKLDPSSEE TQTLVREYFS WDGAFQHVGK AFNQGKIFK