KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:51 2014 Check: 00 .. Name: BACU010025/1-120 Len: 276 Check: 5383 Weight: 1.00 Name: bmy_03061T0/1-145 Len: 276 Check: 8351 Weight: 1.00 Name: ENSTTRP00000007481/1-271 Len: 276 Check: 6321 Weight: 1.00 Name: ENSP00000374354/1-276 Len: 276 Check: 685 Weight: 1.00 Name: ENSBTAP00000015733/1-276 Len: 276 Check: 335 Weight: 1.00 // 1 50 BACU010025/1-120 MASGFKTVEP LEYYTRCLKV NCRPEGRELG ELRTTTVHVG SIGTADGSSL bmy_03061T0/1-145 ---------- -----MVIAK NCGTPGVLQE IF-------G SIGTADGSSL ENSTTRP00000007481/1-271 MAAGFKTVEP LEYYRRFLKE NCRPDGRELG EFRTTTVNIG SIGTADGSSL ENSP00000374354/1-276 MAAGFKTVEP LEYYRRFLKE NCRPDGRELG EFRTTTVNIG SISTADGSAL ENSBTAP00000015733/1-276 MAAGFKTVEP LEYYRRFLKE NCRPDGRELG EFRTTTVNVG SIGTADGSAL 51 100 BACU010025/1-120 VKLGNTTVIC GIKVEFGAPP TDAADKGYVV PNLDLSAPCS WRFRSGPPGE bmy_03061T0/1-145 VKLGNTTVIC GIKAEFGAPP TDAPDKGYVV ---------- ---------- ENSTTRP00000007481/1-271 VKLGNTTVIC GIKAXXXXXX XXXXXXXXXX PNVDLSPLCS WRFRSGPPGE ENSP00000374354/1-276 VKLGNTTVIC GVKAEFAAPS TDAPDKGYVV PNVDLPPLCS SRFRSGPPGE ENSBTAP00000015733/1-276 VKLGNTTVIC GIKAEFGAPP TDAPDKGYVV PNVDLSPLCS SRFRSGPPGE 101 150 BACU010025/1-120 EAQVASH--- ---------- ---------- ---------- ---------- bmy_03061T0/1-145 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007481/1-271 EAQVASQFIA DVIENSQVIQ KEDLCISPGK LAWVLYCDLI CLNHDGNILD ENSP00000374354/1-276 EAQVASQFIA DVIENSQIIQ KEDLCISPGK LVWVLYCDLI CLDYDGNILD ENSBTAP00000015733/1-276 EAQVASQFIA DVIENSQIIQ KEDLCISSGK LAWVLYCDLI CLNHDGNILD 151 200 BACU010025/1-120 ---------- ---------- ---------- ---------- ---LASSLQI bmy_03061T0/1-145 ---------- ---QLPEVTI NEETALAEVN LKKKSYLNIR THPVATSFAV ENSTTRP00000007481/1-271 ACTFALLAAL KNVQLPEVTI NEETALAEVN LKKKSYLNIR THPVATSFAV ENSP00000374354/1-276 ACTFALLAAL KNVQLPEVTI NEETALAEVN LKKKSYLNIR THPVATSFAV ENSBTAP00000015733/1-276 ACTFALLAAL KNVQLPEVTI NEETALAEVN LKKKSCLNIR THPVATSFAV 201 250 BACU010025/1-120 ---------- ---------- SLKI------ -----HR--- ---------- bmy_03061T0/1-145 FDDTLLIVDP TEEEENLATG TLTVVMDEEG KLCCLHKPGT HFPSIAVLNT ENSTTRP00000007481/1-271 FDDTLLIVDP TEEEENLATG TLTVVMDEEG KLCCLHKPGG SGLTGAKLQD ENSP00000374354/1-276 FDDTLLIVDP TGEEEHLATG TLTIVMDEEG KLCCLHKPGG SGLTGAKLQD ENSBTAP00000015733/1-276 FDDTLLIVDP TEEEEHLATG TLTVVMDEEG RLCCLHKPGG SGLTGAKLQD 251 300 BACU010025/1-120 ---------- ---------- ------ bmy_03061T0/1-145 ---------- ---------- ------ ENSTTRP00000007481/1-271 CMSRAVTRHK EVKKLMDEVF K----- ENSP00000374354/1-276 CMSRAVTRHK EVKKLMDEVI KSMKPK ENSBTAP00000015733/1-276 CMSRAVTRHK EVKKLMDEVF KSMKPK