KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:53 2014 Check: 00 .. Name: ENSP00000286732/1-301 Len: 358 Check: 1250 Weight: 1.00 Name: ENSBTAP00000015744/1-268 Len: 358 Check: 4497 Weight: 1.00 Name: ENSTTRP00000000583/1-297 Len: 358 Check: 2773 Weight: 1.00 Name: bmy_07517T0/1-350 Len: 358 Check: 3264 Weight: 1.00 Name: BACU016033/1-260 Len: 358 Check: 1218 Weight: 1.00 // 1 50 ENSP00000286732/1-301 MAQNVYGPGV RIGNWNEDVY LEE------- ---------- ---------- ENSBTAP00000015744/1-268 MAQNLYGPRV RIGNWNEDVY LEE------- ---------- ---------- ENSTTRP00000000583/1-297 MAQ-IYGPGV RMGNWNEDVY ---------- ---------- ---------- bmy_07517T0/1-350 MAQNLYGPGV RMGNWNEDVY LEEVRREDLQ SPKLRSSSQY LYYSGLSLTL BACU016033/1-260 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000286732/1-301 ---------- ELMKDFLEKR DKGKLLIQRS RRLKQNLLRP MQLSVTEDGY ENSBTAP00000015744/1-268 ---------- EIMKDFLAKR DKGQLLIQRN RRLKENLLRP MQLSVSEDGY ENSTTRP00000000583/1-297 ---------- ELMKDFLAKK DKGQLLIQRN RRLKENLLRP MQLSISEDGY bmy_07517T0/1-350 WVSFIFLFNQ ELMKDFLAKR DKGQLLIQRN RRLKENLLRP MQLSISEDGY BACU016033/1-260 ---------- ---------- ---------- ---------- MQLSISEDGY 101 150 ENSP00000286732/1-301 IHYGDKVMLV NPDDPDTEAD VFLRGDLSLC MTPDEIQSHL KDELEVPCGL ENSBTAP00000015744/1-268 IHYGDKVMLV SPDHPETEAD LFLPGDLSLC MTPDEIKAHL SNELEVPCGL ENSTTRP00000000583/1-297 VRYGDKVMLV NPDHPETEAD LFLGGDLSLC MTPDEIKAHL RDALEVPCGL bmy_07517T0/1-350 IRYGDKVMLV NPDHPETEAD LFLGGDLSLC MTPDEIKAHL SDELEVPCGL BACU016033/1-260 IRYGDKVMLV NPDHPETEAD LFLGGDLSLC MTPDEIKAHL SDELEVPCGL 151 200 ENSP00000286732/1-301 SAVQAKTPIG RNTFIILSVH RDATGQVLRY GQDFCLGITG GFDNKMLYLS ENSBTAP00000015744/1-268 SAAQTKIPVG RNTFTILCAA GEVIGQVLRY GQNFRLGITG GFDDRM---- ENSTTRP00000000583/1-297 SAAQTKIPVG RNTFTVLCAA GEVIGQFLRY GQNFRLGIAG GFADRMLYLS bmy_07517T0/1-350 SAAQTKIPVG RNTFTILCAA GEVIGQVLRY GQNFRLGIAG GFADRMLYLS BACU016033/1-260 SAAQTKIPVG RNTFTILCAA GEVIGQVLRY GQNFRLGIAG GFADRMLYLS 201 250 ENSP00000286732/1-301 SDHRTLLKSS KRSWLQEVYL TDEVSHVNCW QAAFPDPQLR LEYEGFPVPA ENSBTAP00000015744/1-268 ---------- ---------- ---------- ---------- ---------A ENSTTRP00000000583/1-297 SDHRTLMKSS KRSWLQEVYL TDEDSYLNCW QAAFPDPQLR LEYEGFPVLA bmy_07517T0/1-350 SDHRTLMKSS KRSWLQEVYL TYEDSYLNCW QAAFPDPQLR LEYEGFPVLA BACU016033/1-260 SDHRTLMKSS KRSWLQEVYL TYEDSYLNCW QAAFPDPQLR LEYEGFPVLA 251 300 ENSP00000286732/1-301 NAKILINHCH TNRGLAAHRH LFLSTYFGKE AEVVAHTYLD SHRVEKPRNH ENSBTAP00000015744/1-268 NTKILITHCH TNRGLVAHRH LFLRTYFGQE AEVAAHTYLD SHRVEKPKNH ENSTTRP00000000583/1-297 NAKILINHCH TNRGLVAHRH LFLSTYFGKE AEVAAHTYLD SHRVEKPKNH bmy_07517T0/1-350 NAKILINHCH TNRGLVAHRH LFLSTYFGKE AEVAAHTYLD SHRVEKPKNH BACU016033/1-260 NAKILINHCH TNRGLVAHRH LFLSTNFGKE AEVAAHTYLD SHRVEKPKNH 301 350 ENSP00000286732/1-301 WMLVTGNPRD ASSSMLDLPK PPTEDTRAM- ---EQAMGLD TQ-------- ENSBTAP00000015744/1-268 WMLVTGAPRK DLSTMLDLPK PPAEDTRALE QEREQVSDPG ARSTPDARGC ENSTTRP00000000583/1-297 WMLVTGNPRK DSSTMLDLSK PPAEDTRVL- ---EHVAEPG QE-------- bmy_07517T0/1-350 WMLVTGNPRK DSSTMLDLPK PPVEDTRVL- ---EQVAEPG ARNAPGAHA- BACU016033/1-260 WMLVTGNPRK DSSTMLDLPK PPAEDTRVL- ---EPVAEAG ARNAPGAHA- 351 400 ENSP00000286732/1-301 -------- ENSBTAP00000015744/1-268 VPQCTLPM ENSTTRP00000000583/1-297 -------- bmy_07517T0/1-350 ---CTRPM BACU016033/1-260 ---CTRPM