KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:53 2014 Check: 00 .. Name: ENSBTAP00000015745/1-951 Len: 952 Check: 8736 Weight: 1.00 Name: ENSP00000386653/1-951 Len: 952 Check: 3147 Weight: 1.00 Name: ENSTTRP00000000873/1-923 Len: 952 Check: 8589 Weight: 1.00 Name: bmy_14905T0/1-816 Len: 952 Check: 510 Weight: 1.00 Name: BACU003191/1-950 Len: 952 Check: 7494 Weight: 1.00 // 1 50 ENSBTAP00000015745/1-951 MRGGGDACGS QAGAVSWSRA TWRPRPDMGS LSRPSSSASH GNLPHLLLFF ENSP00000386653/1-951 MRGRGNARSS QALGVSWCPA TWHPRLDMGR LHRPRSSTSY RNLPHLFLFF ENSTTRP00000000873/1-923 ---------- ---------- -------MGR LSRSRSSTSH RNLPHLLLFF bmy_14905T0/1-816 --------MS AFSSFEKREL CARPRRK--G TEKGTNKTDL RQAAHLLLFF BACU003191/1-950 MRGRGDACSS RALSVSWRPA TWHPRLDMGR LSRSRSSTSH RNLPHLLLFF 51 100 ENSBTAP00000015745/1-951 LFVGPFNCLA SYSRATEILY SLNEGLPAGV LIGSLAEDLR LLP-GAGGQD ENSP00000386653/1-951 LFVGPFSCLG SYSRATELLY SLNEGLPAGV LIGSLAEDLR LLPRSAGRPD ENSTTRP00000000873/1-923 LFVGPFNCLA SYSRATELLY SLNEGLPAGV LIGSLTEDLR EMH-GAGRHD bmy_14905T0/1-816 LFVGPFNCLA SYSRATELLY SLNEGLPAGV LIGSLAEDLR LVP-GAGRQD BACU003191/1-950 LFVGPFNCLA SYSRATELLY SLNEGLPAGV LIGSLAEDLR LVP-GAGRQD 101 150 ENSBTAP00000015745/1-951 LLSQSPQHSV AERNPPLSFS LASQGLSGQY VTLDNRSGEL HTSAQEIDRE ENSP00000386653/1-951 PQSQLPERTG AEWNPPLSFS LASRGLSGQY VTLDNRSGEL HTSAQEIDRE ENSTTRP00000000873/1-923 PQSQPSEHSG AERNPPLSVS LPSQGLSGQY VILDNRSGEL HTSAQEIDRE bmy_14905T0/1-816 TQSQPPEHSG AERNPPLSFS LASQGLSGQY VTLDNRSGEL HTSAQEIDRE BACU003191/1-950 TQSQPPEHSG AERNPPLSFS LASQGLSGQY VTLDNRSGEL HTSAQEIDRE 151 200 ENSBTAP00000015745/1-951 ALCLEGGGGI AWGGSISISS SPSADSCLLL LDVLVLPQEY FRFVKVKIAI ENSP00000386653/1-951 ALCVEGGGGT AWSGSVSISS SPS-DSCLLL LDVLVLPQEY FRFVKVKIAI ENSTTRP00000000873/1-923 ALCLEGGGGA AWRGSISISS SPSADSCLLL LDVLVLPQEY FRFVKVKIAI bmy_14905T0/1-816 ALCLEGGGGA AWGGSISISS SPSADSCLLL LDVLVLPQEY FRFVKVKIAI BACU003191/1-950 ALCLEGGGGA AWGGSISISS SPSADSCLLL LDVLVLPQEY FRFVKVKIAI 201 250 ENSBTAP00000015745/1-951 RDINDNAPRF PISQISVWVP ENAPVNTRLA IEHPAVDPDM GTNGVQTYRL ENSP00000386653/1-951 RDINDNAPQF PVSQISVWVP ENAPVNTRLA IEHPAVDPDV GINGVQTYRL ENSTTRP00000000873/1-923 RDINDNAPQF PVSEISVWVP ENAPVNTRLA IEHPAMDRDI GTNGVQTYRL bmy_14905T0/1-816 RDINDNAPQF PVSEISVWVP ENAPVNTRLA IEHPAMDRDI GTNGVQTYRL BACU003191/1-950 RDINDNAPQF PVSEISVWVP ENAPVNTRLA IEHPAMDRDI GTNGVQTYRL 251 300 ENSBTAP00000015745/1-951 LDYHRMFTLD VEENENGERT PYLIVMGLLD RETQDQYVSV IIAEDGGSPP ENSP00000386653/1-951 LDYHGMFTLD VEENENGERT PYLIVMGALD RETQDQYVSI IIAEDGGSPP ENSTTRP00000000873/1-923 LDYHRMFTLD VEENENGERT PYLIVMGLLD RETQDQYVSI IIAEDGGSPP bmy_14905T0/1-816 LDYHRMFTLD VEENENGERT PYLIVMGLLD RETQDQYVSI IIAEDGGSPP BACU003191/1-950 LDYHRMFTLD VEENENGERT PYLIIMGLLD RETQDQYVSI IIAEDGGSPP 301 350 ENSBTAP00000015745/1-951 LIGSATLTIG ISDINDNCPL FTDSQINITV YGNATVGTPI AAVQAVDRDL ENSP00000386653/1-951 LLGSATLTIG ISDINDNCPL FTDSQINVTV YGNATVGTPI AAVQAVDKDL ENSTTRP00000000873/1-923 LLGSATLTIG ISDINDNCPL FTDSQINATV YGNATVGTPI AAVQAVDRDL bmy_14905T0/1-816 LLGSATLTIG ISDINDNCPL FTDSQINVTM YGNATVGTPI AAVQAVDRDL BACU003191/1-950 LLGSATLTIG ISDINDNCPL FTDSQINVTM YGNATVGIPI AAVQAVDRDL 351 400 ENSBTAP00000015745/1-951 GNNAQITYSY SQKVPQASKD LFHLNENTGV IKLFSKIGGS VLQTHKLTIL ENSP00000386653/1-951 GTNAQITYSY SQKVPQASKD LFHLDENTGV IKLFSKIGGS VLESHKLTIL ENSTTRP00000000873/1-923 GNNAQVTYSY SQKVPQVSKD LFHLDENTGV IKLFSKIGGS VLQTHKLTIL bmy_14905T0/1-816 GNNAQITYSY SQKVPQASKD LFHLDENTGV IKLFSKIGGS VLQTHKLTIL BACU003191/1-950 GNNAQITYSY SQKVPQASKD LFHLDENTGV IKLFSKIGGS VLQTHKLTIL 401 450 ENSBTAP00000015745/1-951 ANGPGCIPAV ITALVTIIKV IFRPPEIVPR YIANQIDGII YLKELEPVNT ENSP00000386653/1-951 ANGPGCIPAV ITALVSIIKV IFRPPEIVPR YIANEIDGVV YLKELEPVNT ENSTTRP00000000873/1-923 ANGPGCIPAM ITALVTIIKV IFRPPEIVPR YIANEIDGIV YLKELEPVKT bmy_14905T0/1-816 ANGPGCIPAV ITALVTIIKV IFRPPEIVPR YIVNEINGIV YLKELEPVNT BACU003191/1-950 ANGPGCIPAV ITALVTIIKV IFRPPEIVPR YIVNEIDGIV YLKELEPVNT 451 500 ENSBTAP00000015745/1-951 PIAFFTIRDP EGKYKVNCYL DGEGPFRLLP YKPYSNEYLL ETTKPMDYEL ENSP00000386653/1-951 PIAFFTIRDP EGKYKVNCYL DGEGPFRLSP YKPYNNEYLL ETTKPMDYEL ENSTTRP00000000873/1-923 PIAFFTIRDP EGKYKVNCYL DGEGPFRLSP YKPYSNEYLL ETTKPMDYEL bmy_14905T0/1-816 PIAFFTIRDP EGKYKVNCYL DGEGPFRLSP YKPYSNEYLL ETTKPMDYEL BACU003191/1-950 PIAFFTIRDP EGKYKVNCYL DGEGPFRLSP YKPYSNEYLL ETTKPMDYEL 501 550 ENSBTAP00000015745/1-951 QQFYEIAIVA WNSEGFQVKK MIKVQLLDDN DNAPVFLQPL VELTIEENNA ENSP00000386653/1-951 QQFYEVAVVA WNSEGFHVKR VIKVQLLDDN DNAPIFLQPL IELTIEENNS ENSTTRP00000000873/1-923 QQFYEIAVVA WNSEGFHVKK MIKVQLLDDN DNAPIFLQPL VELTXXXXXX bmy_14905T0/1-816 QQFYEIAVVA WNSEGFHVKK MIKVQLLDDN DNAPIFLQPL VELTIEENNS BACU003191/1-950 QQFYEIAVVA WNSEGFHVKK MIKVQLLDDN DNAPIFLQPL VELTIEENNS 551 600 ENSBTAP00000015745/1-951 PNAFLTKLDA TDADSGERGQ VSYFLGPDAP SYFSLDSVTG ILTVSTQLDR ENSP00000386653/1-951 PNAFLTKLYA TDADSEERGQ VSYFLGPDAP SYFSLDSVTG ILTVSTQLDR ENSTTRP00000000873/1-923 XXXXXXXXXX XXXXXXXXXX XXXXLGPDAP SYFSLDSVTV VLTVSTQLDR bmy_14905T0/1-816 PNAFLTKLDA TDADSGERGQ VSYFLGPDAP SYFSLDSVTG VLTVSTQLDR BACU003191/1-950 PNAFLTKLDA TDADSGERGQ VSYFLGPDAP SYFSLDSVTG VLTVSTQLDR 601 650 ENSBTAP00000015745/1-951 EEKEKYRYTV RAVDSGKPPQ ESVATVVITV LDKNDNSPRF INKDFSFFVP ENSP00000386653/1-951 EEKEKYRYTV RAVDCGKPPR ESVATVALTV LDKNDNSPRF INKDFSFFVP ENSTTRP00000000873/1-923 EEKEKYKYTV RAVDSGKPPK ESVATVAITV LDKNDNSPRF INKDFSFFVP bmy_14905T0/1-816 EEKEKYKYTV RAVDSGKPPK ESVATVAITV LDKNDNSPRF INKDFSFFVP BACU003191/1-950 EEKEKYKYTV RAVDSGKPPK ESVATVAITV LDKNDNSPRF INKDFSFFVP 651 700 ENSBTAP00000015745/1-951 ENFPGYGEIG VISVTDADTG QNGWVALSVV NQSDIFVIDT GKGLLRAKVS ENSP00000386653/1-951 ENFPGYGEIG VISVTDADAG RNGWVALSVV NQSDIFVIDT GKGMLRAKVS ENSTTRP00000000873/1-923 ENFPGYGEIG IISVTDADAG QNGWVALSVV NQSDIFVIDT GKGTLRAKVS bmy_14905T0/1-816 ENFPGYGEIG VISVTDADAG QNGWVALSVV NQSDIFVIDT GKGMLRAKVS BACU003191/1-950 ENFPGYGEIG VISVTDADAG QNGWVALSVV NQSDIFVIDT GQGMLRAKVS 701 750 ENSBTAP00000015745/1-951 LDREQQSSYT LWVEAVDGGT PPLSSTAKIT ILLLDINDNP PLVLFPQSNM ENSP00000386653/1-951 LDREQQSSYT LWVEAVDGGE PALSSTAKIT ILLLDINDNP PLVLFPQSNM ENSTTRP00000000873/1-923 LDREQQSSYT LWVEAVDGGE PPLSSTTKIT ILLLDINDNP PLVLFPQSNM bmy_14905T0/1-816 LDREQQSSYT LWVEAVDGGE PPLSSTTKIT ILLLDINDNP PLVLFPQSNM BACU003191/1-950 LDREQQSSYT LWVEAVDGGE PPLSSTTKIT ILLLDINDNP PLVLFPQSNM 751 800 ENSBTAP00000015745/1-951 SYLLVLPSTL PGSLVTEVYA VDKDTGMNAV IAYSIIGRRG PRPESFRIDP ENSP00000386653/1-951 SYLLVLPSTL PGSPVTEVYA VDKDTGMNAV IAYSIIGRRG PRPESFRIDP ENSTTRP00000000873/1-923 SYLLVLPSTL PGSPVTEVYA IDKDTGMNAV IAYSIIGRRG PRPESFRIDS bmy_14905T0/1-816 SYLLVLPSTL PGSPVTEVYA VDKDTGMNAV IAYSIIGRRG PRPESFRIDP BACU003191/1-950 SYLLVLPSTL PGSPVTEVYA VDKDTGMNAV IVYSIIGRRG PRPESFRIDP 801 850 ENSBTAP00000015745/1-951 KTGNITLEEA LLQTDYGLHR LLVKVSDHGY PEPLHSTVMV NLFVNDTVSN ENSP00000386653/1-951 KTGNITLEEA LLQTDYGLHR LLVKVSDHGY PEPLHSTVMV NLFVNDTVSN ENSTTRP00000000873/1-923 KTGNITLEEA LLQTDYGLHR LLVKVSDHGY PEPLHSTVMV NLFVNDTVSN bmy_14905T0/1-816 KTGNITLEEA LLQTDYGLHR LLVKVEK--- ---------- ---------- BACU003191/1-950 KTGNITLEEA LLQTDYGLHR LLVKVSDHGY PEPLHSTVMV NLFVNDTVSN 851 900 ENSBTAP00000015745/1-951 ESYIENLLRK EPEISIEEKE PQISIEPTHR KAESVSCMPT LVALSVISLS ENSP00000386653/1-951 ESYIESLLRK EPEINIEEKE PQISIEPTHR KVESVSCMPT LVALSVISLG ENSTTRP00000000873/1-923 ESYIESLLRK EPEINIEEKE PQISIEPTHR KVEPVSCMPT LVALSVISLG bmy_14905T0/1-816 ---------- ---------- ---------- ---------- ---------- BACU003191/1-950 ESYIESLLRK EPEINIEEKE PQISIEPTHR KVEPVSCMPT LVALSVISLG 901 950 ENSBTAP00000015745/1-951 SITFLTGMGI CICLRREKKH HREDENLEVQ TPLKGKIDLH MRERKPMDIS ENSP00000386653/1-951 SITLVTGMGI YICLRKGEKH PREDENLEVQ IPLKGKIDLH MRERKPMDIS ENSTTRP00000000873/1-923 SITLVTGMGI YICLR-GKRH HREDENLGVQ IPLKGKIDLH MRERKPMDIS bmy_14905T0/1-816 ---------- ---------- ---------- ---------- ---------- BACU003191/1-950 SITLITGMGI YICLR-GKRH HREDENLEVQ IPLKGKIDLH MRERKPMDIS 951 1000 ENSBTAP00000015745/1-951 NI ENSP00000386653/1-951 NI ENSTTRP00000000873/1-923 NI bmy_14905T0/1-816 -- BACU003191/1-950 NI