KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:56:54 2014 Check: 00 .. Name: ENSTTRP00000002306/1-661 Len: 875 Check: 1925 Weight: 1.00 Name: bmy_19286T0/1-773 Len: 875 Check: 4898 Weight: 1.00 Name: ENSP00000278823/1-668 Len: 875 Check: 6377 Weight: 1.00 Name: ENSBTAP00000015748/1-666 Len: 875 Check: 8177 Weight: 1.00 // 1 50 ENSTTRP00000002306/1-661 MAANMYRVG- ---------- ---------- ---------- ---------- bmy_19286T0/1-773 MAANMYRVGG AAGPGAGEVG GRDRRGSAPG GEGSRVWGGV VQNADRNRNR ENSP00000278823/1-668 MAANMYRVG- ---------- ---------- ---------- ---------- ENSBTAP00000015748/1-666 MAANMYRVG- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002306/1-661 ---------- ---------- ---------- ---------- ---------- bmy_19286T0/1-773 EHGEGGRGDR DSAGHRDSRR GFGRPDGTRG AESGAAGVAE WAWESGSEGI ENSP00000278823/1-668 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015748/1-666 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000002306/1-661 ---------- ---------- ---------- ---------- ---------- bmy_19286T0/1-773 DRAGRGREGP GRPLCHLRGS RWEVSSSQAL LCASVRKASF LPRPLSPFGL ENSP00000278823/1-668 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015748/1-666 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000002306/1-661 ---------- ---------- ---------- XXXXXXXXXX XXXXXXXXXX bmy_19286T0/1-773 LGPAFAPPTL VLGSPIYSSD LPGSSPPPPT DYVYFENSSS NPYLVRRIEE ENSP00000278823/1-668 ---------- ---------- ---------- DYVYFENSSS NPYLVRRIEE ENSBTAP00000015748/1-666 ---------- ---------- ---------- DYVYFENSSS NPYLVRRIEE 201 250 ENSTTRP00000002306/1-661 XXXTANGNVE AKVVCLFRRR DISSSLNSLA DSNAREFEEE SKQPGVSEQQ bmy_19286T0/1-773 LNKTANGNVE AKVVCLFRRR DISSSLNSLA DSNAR----- ---------- ENSP00000278823/1-668 LNKTANGNVE AKVVCLFRRR DISSSLNSLA DSNAREFEEE SKQPGVSEQQ ENSBTAP00000015748/1-666 LNKTANGNVE AKVVCLFRRR DISSSLNSLA DSNAREFEEE SKQPGVSEQQ 251 300 ENSTTRP00000002306/1-661 RHQLKHRELF LSRQFESLPA THIRGKCSVT LLNETDILSQ YLEKEDCFFY bmy_19286T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSP00000278823/1-668 RHQLKHRELF LSRQFESLPA THIRGKCSVT LLNETDILSQ YLEKEDCFFY ENSBTAP00000015748/1-666 RHQLKHRELF LSRQFESLPA THIRGKCSVT LLNETDILSQ YLEKEDCFFY 301 350 ENSTTRP00000002306/1-661 SLVFDPVQKT LLADQGEIRV GCKYQAEIPD RLAEXXXXXX XXXXXXXXXX bmy_19286T0/1-773 ---------- ---------- ---------- -----ESDNR NQQKMEMKVW ENSP00000278823/1-668 SLVFDPVQKT LLADQGEIRV GCKYQAEIPD RLVEGESDNR NQQKMEMKVW ENSBTAP00000015748/1-666 SLVFDPMQKT LLADQGEIRV GCKYQAEIPD RLAEGESDNR NQQKMEMKVW 351 400 ENSTTRP00000002306/1-661 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19286T0/1-773 DPDNPLTDRQ IDQFLVVARA VGTFARALDC SSSIRQPSLH MSAAAASRDI ENSP00000278823/1-668 DPDNPLTDRQ IDQFLVVARA VGTFARALDC SSSIRQPSLH MSAAAASRDI ENSBTAP00000015748/1-666 DPDNPLTDRQ IDQFLVVARA VGTFARALDC SSSIRQPSLH MSAAAASRDI 401 450 ENSTTRP00000002306/1-661 XXXXXXXXXX XXXXXXXXXX XXXXXXXXPV LCRDEMEEWS -SEAML-EEA bmy_19286T0/1-773 TLFHAMDTLQ RNGYDLAKAM STLVPQGGPV LCRDEMEEWS ASEAMLFEEA ENSP00000278823/1-668 TLFHAMDTLQ RNGYDLAKAM STLVPQGGPV LCRDEMEEWS ASEAMLFEEA ENSBTAP00000015748/1-666 TLFHAMDTLQ RNGYDLAKAM STLVPQGGPV LCRDEMEEWS ASEAMLFEEA 451 500 ENSTTRP00000002306/1-661 LEKYGKDFND IRQDFLPWKS LASIVQFYYM WKTTDRYIQQ KRLKAAEADS bmy_19286T0/1-773 LEKYGKDFND IRQDFLPWKS LASIVQFYYM WKTTDRYIQQ KRLKAAEADS ENSP00000278823/1-668 LEKYGKDFND IRQDFLPWKS LASIVQFYYM WKTTDRYIQQ KRLKAAEADS ENSBTAP00000015748/1-666 LEKYGKDFND IRQDFLPWKS LASIVQFYYM WKTTDRYIQQ KRLKAAEADS 501 550 ENSTTRP00000002306/1-661 KLKQVYIPTY TKPNPNQIIS VGSKPGMNGA GFQKGLTCES CHTTQSAQWY bmy_19286T0/1-773 KLKQVYIPTY TKPNPNQIIS VGSKPGMNGA GFQKGLTCES CHTTQSAQWY ENSP00000278823/1-668 KLKQVYIPTY TKPNPNQIIS VGSKPGMNGA GFQKGLTCES CHTTQSAQWY ENSBTAP00000015748/1-666 KLKQVYIPTY TKPNPNQIIS VGSKPGMNGA GFQKGLTCES CHTTQSAQWY 551 600 ENSTTRP00000002306/1-661 AWGPPNMQCR LCASCWIYWK KYGGLKTPTQ LEGAARGTT- ---------- bmy_19286T0/1-773 AWGPPNMQCR LCASCWIYWK KYGGLKTPTQ LEGAARGTTV RMDDEGQVGE ENSP00000278823/1-668 AWGPPNMQCR LCASCWIYWK KYGGLKTPTQ LEGATRGTT- ---------- ENSBTAP00000015748/1-666 AWGPPNMQCR LCASCWIYWK KYGGLKTPTQ LEGAARGTT- ---------- 601 650 ENSTTRP00000002306/1-661 ---------- ---------- EHSGHLSRPE A-SLSPXXXX XXXXXXXXXX bmy_19286T0/1-773 SSKLIDVSFK RRPGHPAPEP HSRGHLSRPE AQSLSPYTTS ANRAKLLAKN ENSP00000278823/1-668 ---------- --------EP HSRGHLSRPE AQSLSPYTTS ANRAKLLAKN ENSBTAP00000015748/1-666 ---------- --------EP HSRGHLSRPE AQGLSPYTTS ANRAKLLAKN 651 700 ENSTTRP00000002306/1-661 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSIRLP bmy_19286T0/1-773 RQTFLLQTTK LTRLARRMCR DLLQPRRAAR RPYAPINANA IKAECSIRLP ENSP00000278823/1-668 RQTFLLQTTK LTRLARRMCR DLLQPRRAAR RPYAPINANA IKAECSIRLP ENSBTAP00000015748/1-666 RQTFLLQTTK LTRLARRMCR DLLQPRRAAR RPYAPINANA IKAECSIRLP 701 750 ENSTTRP00000002306/1-661 KAAKTPLKIH PLVRLPLATI VKDLVAQAPL KPKTPRGTKT PINRNQLTQN bmy_19286T0/1-773 KAAKTPLKIH PLVRLPLATI VKDLVAQAPL KPKTPRGTKT PINRNQLTQN ENSP00000278823/1-668 KAAKTPLKIH PLVRLPLATI VKDLVAQAPL KPKTPRGTKT PINRNQLSQN ENSBTAP00000015748/1-666 KAAKTPLKIH PLVRLPLATI VKDLVAQAPL KPKTPRGTKT PINRNQLTQN 751 800 ENSTTRP00000002306/1-661 RGLGGIMVKR AYETMA--GV PFSANGRPLA SGIRSSSQPA AKRQKLNPAD bmy_19286T0/1-773 RGLGGIMVKR AYETMA--GV PFSANGRPLA SGIRSSSQPA AKRQKLNPAD ENSP00000278823/1-668 RGLGGIMVKR AYETMAGAGV PFSANGRPLA SGIRSSSQPA AKRQKLNPAD ENSBTAP00000015748/1-666 RGLGGIMVKR AYETMA--GV PFSANGRPLA SGIRSSSQPA AKRQKLNPAD 801 850 ENSTTRP00000002306/1-661 APNPVVFVAT KDTRALRKAL THLEMRRAAR RPNLPLKVKP PLIAVRPPVP bmy_19286T0/1-773 APNPVVFVAT KDTRALRKAL THLEMRRAAR RPNLPLKVKP PLIAVRPPVP ENSP00000278823/1-668 APNPVVFVAT KDTRALRKAL THLEMRRAAR RPNLPLKVKP TLIAVRPPVP ENSBTAP00000015748/1-666 APNPVVFVAT KDTRALRKAL THLEMRRAAR RPNLPLKVKP PLMAVRPPVP 851 900 ENSTTRP00000002306/1-661 LPPSSHPAST S-------EP IVLED bmy_19286T0/1-773 LPPSSHPAST RFLFLSGVRT FLIGV ENSP00000278823/1-668 LPAPSHPAST N-------EP IVLED ENSBTAP00000015748/1-666 LPPSSHPAST N-------EP IVLED