KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:59 2014 Check: 00 .. Name: ENSP00000357465/1-366 Len: 414 Check: 6196 Weight: 1.00 Name: ENSBTAP00000015765/1-351 Len: 414 Check: 1233 Weight: 1.00 Name: bmy_09706T0/1-318 Len: 414 Check: 1964 Weight: 1.00 Name: ENSTTRP00000013272/1-342 Len: 414 Check: 7116 Weight: 1.00 Name: BACU007474/1-266 Len: 414 Check: 7775 Weight: 1.00 // 1 50 ENSP00000357465/1-366 MSWNISHPQL SDKLFGKNGV LEEQKSPGFK KRETEVYVGN LPLDISKEEI ENSBTAP00000015765/1-351 RSCSSSDFRP SAKVFGENGA LEEQKSPKFK KRETEVYVGN LPLDISEEEI bmy_09706T0/1-318 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013272/1-342 ---------- ---------G VLEQKFPRFK KRETQVYVGN LPLDISEEEI BACU007474/1-266 ---------- ---------- ---MRAPSEA DQ-------- ---------- 51 100 ENSP00000357465/1-366 LYLLKDFNPL DVHKIQNGCK CFAFVDLGSM QKVTLAIQEL NGKLFHKRKL ENSBTAP00000015765/1-351 RCLLKDFSPL HVHRVQNGCR CFAFVDLGST QKVALAIQAL NGKLFHKRKL bmy_09706T0/1-318 ---------- ---------M CSQVAVSGEW GK------QR SGRAGRSVGV ENSTTRP00000013272/1-342 RCLLKDFNPL HVHKIQNGCK CFAFVDVGSM QKVALAIQEL NGKLFRKRKL BACU007474/1-266 ---------- ---------R RFAFVDVGSM QKVAFAIQEL NGKLFHERKL 101 150 ENSP00000357465/1-366 FVNTSKRPPK RTPDMIQQPR APLVLEKASG EGFGKTAAII QLAPKAPVDL ENSBTAP00000015765/1-351 YVNSNNRSPK RTPDVTERPQ ELLISEKASA QGFAGTTACP QLTPKASGEP bmy_09706T0/1-318 TRAGD----- -FPGVDGGAR EASGLEKASG QGFARTTACT QLTPKASVDP ENSTTRP00000013272/1-342 YVNSN-RSPK RTLDVTEWTQ ELLGLEKTSG QGFARTTACT QLVPKASVDP BACU007474/1-266 YVNSNRRSPK RTPDVTEWTQ ELLGLEKASG QGFARTTACT QLAPKASVDP 151 200 ENSP00000357465/1-366 CETEKLRAAF FAVPLEMRGS FLVLLLRECF RDLSWLALIH SVRGEAGLLV ENSBTAP00000015765/1-351 CETEKSKTSF FAVPMEMRGS FLVLLLRECF RDLGWLATIP SISGEVGLLV bmy_09706T0/1-318 CETEKPRTSI FAVPMEMRGS FLVLLLRECF RDLGWLATIH SIGGDVGLLV ENSTTRP00000013272/1-342 CKTEKPRTSI FAVPMEMRGS FLALLLRECF RDLGWLATIH SVGGDVGLLV BACU007474/1-266 CETEKPRTSI FAVPVEMRGS FLVLLLRECF RDLGWLATIH SIGGDVGLLV 201 250 ENSP00000357465/1-366 TSIVPKTPFF WAMHVTE--- ---------- ---------- ---------- ENSBTAP00000015765/1-351 TSTVPQTPFF WAMHITE--- ---------- ---------- ---------- bmy_09706T0/1-318 TSIVPQTPFF WAMHVTEVQA CWWSSWASVP PHGALLGGAD VTGDTCRDRR ENSTTRP00000013272/1-342 TSIVPQT-FF WAMHVTE--- ---------- ---------- ---------- BACU007474/1-266 TGIVPQTP-F WAMHVTE--- ---------- ---------- ---------- 251 300 ENSP00000357465/1-366 ---------- -----ALHQN MQALFSTLAQ AEEQQPYLEG STVMRGTRCL ENSBTAP00000015765/1-351 ---------- -----TLHQN MQALFSALAE AEERQPYLQD SAVRRGTRGL bmy_09706T0/1-318 VMGRQRGPWR LYHPQTLHQN MQALFRALAE AEEQQPYLHD SAVRRGTRCL ENSTTRP00000013272/1-342 ---------- -----TLHQN MQALFRALAE AEEQQPYLHD SAVRRGTRCL BACU007474/1-266 ---------- -----TLHQN MQALFRALAE AEEQQPYLHD SAVRRGTRCL 301 350 ENSP00000357465/1-366 AEYHLGDYGH AWNRCWVLDR VDTWAVVMFI DFGQLATIPV QSLRSLDSDD ENSBTAP00000015765/1-351 AKYHLGDYGP AWNRCWVLDR VDSWVVVMFV DFGRSATIPV QSLRTLDGDN bmy_09706T0/1-318 AEYQLGDYGW AWNRCWVLDR VDSWAVVMFI DFGQLATIPV QSLRSLDSDD ENSTTRP00000013272/1-342 AEYQLGDYGW AWNRCWVLDR VDSWAVVTFI DFGQSATIPV QSLRSLDSDD BACU007474/1-266 AEYQLGDYGR AWNRCWVLDR VDPWAVVMFI DFGQLATIPV QSLRSLDSDD 351 400 ENSP00000357465/1-366 FWTIPPLTQP FMLEKDILSS YEVVHRILKG KITGALNSAV TAPASNLAVV ENSBTAP00000015765/1-351 FWTIPPLTQP FMLEKGILSS NQVIHRILKG KITGALNLES HILKFEEFE- bmy_09706T0/1-318 FWTIPPLAQP FMLEKDILSS YQVIHRILKG KITGALNLEL HILKFEEFK- ENSTTRP00000013272/1-342 FWTIPPLAQP FMLEKDIWSS CQVIHRILKG KITGALNLEV TAVSTVPLLY BACU007474/1-266 FGTIPP--TP PRLSHSCWRK VRC------- ---------- ---------- 401 450 ENSP00000357465/1-366 PPLLPLGCLQ QAAA ENSBTAP00000015765/1-351 ---------- ---- bmy_09706T0/1-318 ---------- ---- ENSTTRP00000013272/1-342 LPRSQLQALA S--- BACU007474/1-266 PPPS------ ----