KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:56:59 2014 Check: 00 .. Name: BACU014862/1-113 Len: 646 Check: 5966 Weight: 1.00 Name: bmy_12054T0/1-334 Len: 646 Check: 6713 Weight: 1.00 Name: ENSTTRP00000013552/1-642 Len: 646 Check: 6356 Weight: 1.00 Name: ENSP00000333519/1-644 Len: 646 Check: 7419 Weight: 1.00 Name: ENSBTAP00000015768/1-578 Len: 646 Check: 4229 Weight: 1.00 // 1 50 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013552/1-642 ---MPSPDEE ERERRRSRRR DLLLSQIGFL ALVALLLWSL SSMHDHDDLD ENSP00000333519/1-644 MRPSGDEDRA RRRRRRRRRR DLLLSQLCFL ASVALLLWSL SSLREQKELD ENSBTAP00000015768/1-578 ---------- ---------- ---------- ---------- ---------- 51 100 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013552/1-642 FMDLIGQDRQ WTVGRKLMQV NDSLTSEDAG PRSSKNCTEP ALHEFPNDIF ENSP00000333519/1-644 LMDLVGEDRK WMMARKLMQV NDTLTSEDAG LRNSKNCTEP ALHEFPNDIF ENSBTAP00000015768/1-578 ---------- -------MQV NDSLTSEDAG PRSSKNCTEP ALHEFPNDIF 101 150 BACU014862/1-113 ---------- -------MYM FYALAIVCDD FFVPSLEKIC ERLHLSEDVA bmy_12054T0/1-334 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013552/1-642 TNEDRRQGAV VLHVLCAMYM FYALAIVCDD FFVPSLEKIC ERLHLSKDVA ENSP00000333519/1-644 TNEDRRQGAV VLHVLCAIYM FYALAIVCDD FFVPSLEKIC ERLHLSEDVA ENSBTAP00000015768/1-578 TNEDRRQGAV VLHVLCAMYM FYALAIVCDD FFVPSLEKIC ERLHLSEDVA 151 200 BACU014862/1-113 GATFMAAGSS APELFTSVIG VFITKGDVGV GTIVGSAVFN ILCIIGVCGL bmy_12054T0/1-334 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013552/1-642 GATFMAAGIS PPKLFTPVLG VFITKGDVGV GTIVGSAVFN ILCIIGVCGL ENSP00000333519/1-644 GATFMAAGSS APELFTSVIG VFITKGDVGV GTIVGSAVFN ILCIIGVCGL ENSBTAP00000015768/1-578 GATFMAAGSS APELFTSVIG VFITKGDVGV GTIVGSAVFN ILCIIGVCGL 201 250 BACU014862/1-113 FAGQ------ ---------- ---------- ---------- ---------- bmy_12054T0/1-334 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013552/1-642 FAGQVVALSS WCLLRDSIYY TLSVVALIVF IYDEQVSWWE SLVLVLMYLI ENSP00000333519/1-644 FAGQVVALSS WCLLRDSIYY TLSVIALIVF IYDEKVSWWE SLVLVLMYLI ENSBTAP00000015768/1-578 FAGQVVALSS WCLLRDSIYY TLSVVALIVF IYDEQVSWWE SLVLVLMYLI 251 300 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 -MAVSRYNAC IHQCFERRTK GAGNMVNGLA NNAEIDDSSN CDATVVLLKR ENSTTRP00000013552/1-642 YIVIMKYNAC IHQCFERRTK GAGNMVNGLA NNAEIDDSSN CDATVVLLKR ENSP00000333519/1-644 YIVIMKYNAC IHQCFERRTK GAGNMVNGLA NNAEIDDSSN CDATVVLLKK ENSBTAP00000015768/1-578 YIVIMKYNAC IHQCFERKTK GAGNMVNGLA NNAEMDDSGN CDATVVLLKR 301 350 BACU014862/1-113 ---------- ---------- ---GFDE--- ---------- ---------- bmy_12054T0/1-334 ANFHRKASVI MVDELLSAYP HQLSFSEAGL RIMITSHFPP KTRLSMASRM ENSTTRP00000013552/1-642 ANFHRKASVI MVDELLSAYP HQLSFSEAGL RIMITSHFPP KTRLSMASRM ENSP00000333519/1-644 ANFHRKASVI MVDELLSAYP HQLSFSEAGL RIMITSHFPP KTRLSMASRM ENSBTAP00000015768/1-578 ANFHRKASVI MVDELLSAYP HQLSFSEAGL RIMITSHFPP KTRLSMASRM 351 400 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 LINERQRLIN SRAYANGESE VAIKIPIKHT VENGMGPSSA LDRGVNGTRG ENSTTRP00000013552/1-642 LINERQRLIN SRAYANGESE VAIKIPIKHT VENGMGPSST LDRGVNGTRG ENSP00000333519/1-644 LINERQRLIN SRAYTNGESE VAIKIPIKHT VENGTGPSSA PDRGVNGTRR ENSBTAP00000015768/1-578 LINERQRLIN SRAYANGESE VAIKIPIKHT VENGTGPSSA PDRGVSGTRR 401 450 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 DDVVAEAGNE TENENEDNEN DEN-EEEEDE EDEEGPYTPF DPPSGKLETV ENSTTRP00000013552/1-642 DDVVAEAGNE TENENEDNEN DEN-EGEEDE EDEEGPYTPF DPPSGKLETV ENSP00000333519/1-644 DDVVAEAGNE TENENEDNEN DE--EEEEDE DDDEGPYTPF DTPSGKLETV ENSBTAP00000015768/1-578 DEVV-EAGDE TENENEDNEN NENDEEEEDE EEEEGPYTPF DPPSGKLETV 451 500 BACU014862/1-113 ---------- ---FDVIKC- ------LLYL QFANTA---- ---------- bmy_12054T0/1-334 KWAFTWPLSF VLYFTVPNCN KPRWEKWFMV TFASSTLWIA AFSYMMVWMV ENSTTRP00000013552/1-642 KWAFTWPLSF VLYFTVPNCN KPRWEKWFMV TFASSTLWIA AFSYMMVWMV ENSP00000333519/1-644 KWAFTWPLSF VLYFTVPNCN KPRWEKWFMV TFASSTLWIA AFSYMMVWMV ENSBTAP00000015768/1-578 KWAFTWPLSF VLYFTVPNCN KPRWEKWFMV TFASSTLWIA AFSYMMVWMV 501 550 BACU014862/1-113 ---------- ---------- ---------S ALVFA----- ---------- bmy_12054T0/1-334 TIIGYTLGIP DVIMGITFLA AGTSVPDCMA SLIVARQGMG DMAVSNSIGS ENSTTRP00000013552/1-642 TIIGYTLGIP DVIMGITFLA AGTSVPDCMA SLIVARQGMG DMAVSNSIGS ENSP00000333519/1-644 TIIGYTLGIP DVIMGITFLA AGTSVPDCMA SLIVARQGMG DMAVSNSIGS ENSBTAP00000015768/1-578 TIIGYTLGIP DVIMGITFLA AGTSVPDCMA SLIVARQGMG DMAVSNSIGS 551 600 BACU014862/1-113 ---------- ---------- ---------- ---------- ---------- bmy_12054T0/1-334 NVFDILIGLG LPWALQTLAV DYGSY----- ---------- ---------- ENSTTRP00000013552/1-642 NVFDILIGLG LPWALQTLAV DYGSYIRLNS RGXXXXXXXX XXXXXXXVFG ENSP00000333519/1-644 NVFDILIGLG LPWALQTLAV DYGSYIRLNS RGLIYSVGLL LASVFVTVFG ENSBTAP00000015768/1-578 NVFDILIGLG LPWALQTLAV DYGSYIRLNS KGLIYSVGLL LASVFVTVFG 601 650 BACU014862/1-113 ---------- ---------- ---------- ---------- ------ bmy_12054T0/1-334 ------TLSK DGGRNCS--- ---------- ---------- ------ ENSTTRP00000013552/1-642 VHLNKWQLDR KLGCGCLFLY GVFLCFSIMT EFNVFTFVNL PMCGDH ENSP00000333519/1-644 VHLNKWQLDK KLGCGCLLLY GVFLCFSIMT EFNVFTFVNL PMCGDH ENSBTAP00000015768/1-578 VHLNKWQLDR KLGCGCLFLY GVFLCFSIMT EFNVFTFVNL PMCGDH