KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:57:02 2014 Check: 00 .. Name: BACU003695/1-397 Len: 475 Check: 9514 Weight: 1.00 Name: ENSP00000239231/1-370 Len: 475 Check: 742 Weight: 1.00 Name: bmy_01540T0/1-448 Len: 475 Check: 580 Weight: 1.00 Name: ENSBTAP00000015780/1-370 Len: 475 Check: 14 Weight: 1.00 // 1 50 BACU003695/1-397 ---------- ---------- ---------- ---------- ---------- ENSP00000239231/1-370 ---------- ---------- ---------- ---------- ---------- bmy_01540T0/1-448 GGLPLLARSR PPLAGVGGAA PWAGASSQAP PPRPWPAPPG PRGGTGRASQ ENSBTAP00000015780/1-370 ---------- ---------- ---------- ---------- ---------- 51 100 BACU003695/1-397 ---------- ---------- --------MK IKDAKKPSFP WFVMDIGGTL ENSP00000239231/1-370 ---------- ---------- --------MK IKDAKKPSFP WFGMDIGGTL bmy_01540T0/1-448 RGPATSGVAA ATLCAPYPRL PLAPQADAMK IKDAKKPSFP WFGMDIGGTL ENSBTAP00000015780/1-370 ---------- ---------- --------MK IKDAKKPSFP WFGMDIGGTL 101 150 BACU003695/1-397 VKLSYFEPID ITAEEEQEEV ESLKSIRKYL TSNVAYGSTG IRDVHLELKD ENSP00000239231/1-370 VKLSYFEPID ITAEEEQEEV ESLKSIRKYL TSNVAYGSTG IRDVHLELKD bmy_01540T0/1-448 VKLSYFEPID ITAEEEQEEV ESLKSIRKYL TSNVAYGSTG IRDVHLELKD ENSBTAP00000015780/1-370 VKLSYFEPID ITAEEEQEEV ESLKSIRKYL TSNVAYGSTG IRDVHLELKD 151 200 BACU003695/1-397 LTLFGRRGNL HFIRFPTQDL PTFIQMGRDK NFSTLHTVLC ATGGGAYKFE ENSP00000239231/1-370 LTLFGRRGNL HFIRFPTQDL PTFIQMGRDK NFSTLQTVLC ATGGGAYKFE bmy_01540T0/1-448 LTLFGRRGNL HFIRFPTQDL PTFIQMGRDK NFSTLHTVLC ATGGGAYKFE ENSBTAP00000015780/1-370 LTLFGRRGNL HFIRFPTQDL PTFIQMGRDK NFSTLHTVLC ATGGGAYKFE 201 250 BACU003695/1-397 KDFRTIGNLH LHKLDELDCL VKGLLYIDSV SFNGQAECYY FANASEPERC ENSP00000239231/1-370 KDFRTIGNLH LHKLDELDCL VKGLLYIDSV SFNGQAECYY FANASEPERC bmy_01540T0/1-448 KDFRTIGNLH LHKLDELDCL VKGLLYIDSV SFNGQAECYY FANASEPERC ENSBTAP00000015780/1-370 KDFRTIGNLH LHKLDELDCL VKGLLYIDSV SFNGQAECYY FANASEPERC 251 300 BACU003695/1-397 QKMPFNLDDP YPLLVVNIGS GVSILAVHSK DDYKRVTGTS LGGGTFLGLC ENSP00000239231/1-370 QKMPFNLDDP YPLLVVNIGS GVSILAVHSK DNYKRVTGTS LGGGTFLGLC bmy_01540T0/1-448 QKMPFNLDDP YPLLVVNIGS GVSILAVHSK DNYKRVTGTS LGGGTFLGLC ENSBTAP00000015780/1-370 QKMPFNLDDP YPLLVVNIGS GVSILAVHSK DNYKRVTGTS LGGGTFLGLC 301 350 BACU003695/1-397 SLLTGCESFE EALEMASKGD STQADKLVRD IYGGDYERFG LPGWAVASSF ENSP00000239231/1-370 SLLTGCESFE EALEMASKGD STQADKLVRD IYGGDYERFG LPGWAVASSF bmy_01540T0/1-448 SLLTGCESFE EALEMASKGD STQADKLVRD IYGGDYERFG LPGWAVASSF ENSBTAP00000015780/1-370 SLLTGCESFE EALEMASKGD STQADKLVRD IYGGDYERFG LPGWAVASSF 351 400 BACU003695/1-397 GNMIYKEKRE SVSKEDLARA TLVTITNNIG SVARMCAVNE KINRVVFVGN ENSP00000239231/1-370 GNMIYKEKRE SVSKEDLARA TLVTITNNIG SVARMCAVNE KINRVVFVGN bmy_01540T0/1-448 GNMIYKEKRE SVSKEDLARA TLVTITNNIG SVARMCAVNE KINRVVFVGN ENSBTAP00000015780/1-370 GNMIYKEKRE SVSKEDLARA TLVTITNNIG SIARMCAVNE KINRVVFVGN 401 450 BACU003695/1-397 FLRVNTLSMK LLAYALDYWS KGQLKALFLE HELEFGVCYP NFFGGGKSNF ENSP00000239231/1-370 FLRVNTLSMK LLAYALDYWS KGQLKALFLE HE-------- GYFGAVGA-- bmy_01540T0/1-448 FLRVNTLSMK LLAYALDYWS KGQLKALFLE HE-------- GYFGAVGA-- ENSBTAP00000015780/1-370 FLRVNTLSMK LLAYALDYWS KGQLKALFLE HE-------- GYFGAVGA-- 451 500 BACU003695/1-397 YHILNMPFRK FKALNLKKLS EYVLT ENSP00000239231/1-370 --LLGLP--N FS-------- ----- bmy_01540T0/1-448 --LLGLP--N FS-------- ----- ENSBTAP00000015780/1-370 --LLGLP--N FS-------- -----