KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:57:02 2014 Check: 00 .. Name: ENSP00000085219/1-847 Len: 860 Check: 182 Weight: 1.00 Name: ENSBTAP00000015781/1-851 Len: 860 Check: 9190 Weight: 1.00 Name: bmy_12277T0/1-849 Len: 860 Check: 6139 Weight: 1.00 Name: ENSTTRP00000008823/1-844 Len: 860 Check: 7420 Weight: 1.00 // 1 50 ENSP00000085219/1-847 --MHLLGPWL LLL----VLE YLAFSDSSKW VFEHPETLYA WEGACVWIPC ENSBTAP00000015781/1-851 STMHLLGPSL LLLGKDGSLE YLAFSDSA-W NFRHPKTLYA WDGACVWIPC bmy_12277T0/1-849 MLSVSFSNAF CSLWW--VPE YLAFSDSASW TFEHPKTLYA WDGACVWIPC ENSTTRP00000008823/1-844 --MHLLGPLL LLL----VPE YLAFSDSAQW TFEHPKILYA WDGACVWIPC 51 100 ENSP00000085219/1-847 TYRALD---G DLESFILFHN PEYNKNTSKF DGTRLY-EST KDGKVPSEQK ENSBTAP00000015781/1-851 TYSSVKGGGH TLDNLTVYHN FTYDKKTKHY NGTILYNKSL KTKESTPSQE bmy_12277T0/1-849 RYNIIN--RH SIDNLTVYHN YKYDNSTKSY SGTILY-KNL KIRDFPPHQG ENSTTRP00000008823/1-844 RYRILN--KH LLDNLTVYHN YEYDSSTKNY NGTVLY-KNL KIREFPTRQG 101 150 ENSP00000085219/1-847 RVQFLGDKNK NCTLSIHPVH LNDSGQLGLR MESKTEKWME RIHLNVSERP ENSBTAP00000015781/1-851 RVQFLGNNRN NCTLLINPVK VNDSGLLGLR VTSGTDKWMA SLNLSISESA bmy_12277T0/1-849 RVRFLGNSRY NCTLLINPVK VNDSGQLGLR MTSKEDKWME PIGLNISETA ENSTTRP00000008823/1-844 RVQFLGNGRS NCTLLINPVK VNDSGQLGLR MMSGENKWME AIGLNVSETA 151 200 ENSP00000085219/1-847 FPPHIQLPPE IQESQEVTLT CLLNFSCYGY PIQLQWLLEG VPMRQAAVTS ENSBTAP00000015781/1-851 PQPHIELHQE IREDQEVTVT CSLNFACRDY QVHLQWSLEG -----SVTTS bmy_12277T0/1-849 PPPRIELPPE IQELRDVTVT CLLNFACFEY QVHLQWSLEE -----PAVTS ENSTTRP00000008823/1-844 PPPHIELPPD IRELHDVTVT CSLNFACFEY QVHLQWSLEE -----RAVTS 201 250 ENSP00000085219/1-847 TSLTIKSVFT RSELKFSPQW SHHGKIVTCQ LQD-ADGKFL SNDTVQLNVK ENSBTAP00000015781/1-851 TILSPERVAT QSHLSFQPKW THDGKNLTCQ LWDPMKQRIL SEKTVLLEVK bmy_12277T0/1-849 TCLSTKTVST QSTLTFQPQW XHHGKNLTCQ LWDPTEQQLL SEETVWLDVK ENSTTRP00000008823/1-844 TSLSTETVST QSTLTFQPQW THHGKNLTCQ LWDPTEQQLL SEETVWLDVK 251 300 ENSP00000085219/1-847 HTPKLEIKVT PSDAIVREGD SVTMTCEVSS SNPEYTTVSW LKDGTSLKKQ ENSBTAP00000015781/1-851 HAPNLEIQVS PQEAIVTEGE SVTMRCQVIS SNPPHWSVSW FKDRTKLKEQ bmy_12277T0/1-849 HAPKLKIQVS PTEATVTEGE SVTMTCQIVS SNPRHQGVSW LRDGAPLVGE ENSTTRP00000008823/1-844 HAPKLKIQVS PREATVTEGE SVTMTCQVVS SNPRHQKVAW LRDGVLLVGE 301 350 ENSP00000085219/1-847 NTFTLNLREV TKDQSGKYCC QVSNDVGPGR SEEVFLQVQY APEPSTVQIL ENSBTAP00000015781/1-851 GT-TLVLPEV TRMMSGQYTC QVSNDVGSRQ SDVVDLQVHY PPEPSWVQLS bmy_12277T0/1-849 ETPTLTLPQV TRKTSGQYQC KAHNAVGSEK SEAVDLQVHY APEPSRVQIV ENSTTRP00000008823/1-844 ETPTLTLPEV TRRMSGQYQC KAHNDVGSEE SEAVDLQVHY APEPSRVQIV 351 400 ENSP00000085219/1-847 HSPAVEGSQV EFLCMSLANP LPTNYTWYHN GKEMQGRTEE KVHIPKILPW ENSBTAP00000015781/1-851 PSSIKEGVTV ELTCMSVANP PPANYTWYFN EQEIPGKNGR TFQIPQVLVK bmy_12277T0/1-849 SSPAKEGNKV ELTCISLANP PPTNYTWYYN GLEMPGKTDR TFQIPEVLLR ENSTTRP00000008823/1-844 SSPTKEGNEV ELTCISLANP PPTNYTWYYN GLAMPGKTGR TFQIPEVLLR 401 450 ENSP00000085219/1-847 HAGTYSCVAE NILGTGQRGP GAELDVQYPP KKVTTVIQNP MPIREGDTVT ENSBTAP00000015781/1-851 HAGRYSCLAE NSLGPGSVDR EADLNVQYPP KGVTTVIQNP TPIREGDSVT bmy_12277T0/1-849 HAGEYSCLAE NSLGPGEVGQ EADLEVQYPP KEVITVIQNP TPIREGDSVI ENSTTRP00000008823/1-844 HAGEYSCLAE NDLGPGQVGQ EADLEVQYPP KEVITVIQSP TPIREGDSVI 451 500 ENSP00000085219/1-847 LSCNYNSSNP SVTRYEWKPH GAWEEPSLGV LKIQNVGWDN TTIACAACNS ENSBTAP00000015781/1-851 LSCTFNSSNP RVTRYNWNSP GSQDHTSQK- LTIQKVTWDA QPVKCEACNQ bmy_12277T0/1-849 LSCTYNSSNP RVTRYEWNHL GFQDQLLPAG LTIRKVAWDT GPVKCAACNQ ENSTTRP00000008823/1-844 LSCTYNSSNP RVTRYEWDHL GFQDQLSPAG LTIRKVAWD- RAIKCAACNQ 501 550 ENSP00000085219/1-847 WCSWASPVAL NVQYAPRDVR VRKIKPLSEI HSGNSVSLQC DFSSSHPKEV ENSBTAP00000015781/1-851 WCSWSPSVNL NVLYAPRDVN I-QISPNTEI QSEKRVLLQC QYSSSRPADV bmy_12277T0/1-849 WCLWSPLVNL DVQYAPKDVS V-QVTPHNEI HSGNPVLLQC DFLSSRPTDV ENSTTRP00000008823/1-844 WCLWSPPVDL DVQYAPKDVS V-QVTSHSEI RSGRPVLLQC DFLSSRPMDV 551 600 ENSP00000085219/1-847 QFFWEKNGRL LGKESQLNFD SISPEDAGSY SCWVNNSIGQ TASKAWTLEV ENSBTAP00000015781/1-851 HFFWKKDGSL LKEGKTLTFG QIFPEDSGTY HCLVNNSIGQ TSSKAYELQV bmy_12277T0/1-849 RFFWKKNGIL LEEGKKLSFD AISPEDAGIY HCLVNNSIGQ TSSKARALQV ENSTTRP00000008823/1-844 RFFWKKNGIF LEEGKKLSFD AISPEDAGTY HCLVNNSIGQ TSSKAWALQV 601 650 ENSP00000085219/1-847 LYAPRRLRVS MSPGDQVMEG KSATLTCESD ANPPVSHYTW FDWNNQSLPY ENSBTAP00000015781/1-851 LYAPRRLRVS ISPKDGVVEG KTAVLTCESD ANPPISHYDW FDGKNQDLHY bmy_12277T0/1-849 LYAPRSLRVS ISPKDRVVEG KKAVLTCESD ANPPTSHYAW FDWNNQDLRH ENSTTRP00000008823/1-844 LYAPRSLHVS ISPKDGVVEG KKAVLTCESD ANPPTSHYAW FDWNNQDLRH 651 700 ENSP00000085219/1-847 HSQKLRLEPV KVQHSGAYWC QGTNSVGKGR SPLSTLTVYY SPETIGRRVA ENSBTAP00000015781/1-851 YGQMLRLEPV KLQHAGSYWC RGTNRLGQSQ SPPTTLTVYY SAATISRRAA bmy_12277T0/1-849 YDQMLRLDPV TPQHSGAYWC QGTNRLGRGQ SPPTTLTVYY NSATISRRVA ENSTTRP00000008823/1-844 YDQTLRLDPV TLQHSGAYWC QGTNRLGRGQ SPPTTLTVYY SSASIIRRVA 701 750 ENSP00000085219/1-847 VGLGSCLAIL ILAICGLKLQ RRWKRTQSQQ GLQENSSGQS FFVRNKKVRR ENSBTAP00000015781/1-851 LGVGFCLAIF LLAIWGVKLQ RSWKRIQRQQ GLQESSSGQS FFVRNLKARR bmy_12277T0/1-849 LGVGLCLAIF LLAIWGVKLQ RSWKRIRRQQ GLQESSSGQS FFVRNMKARR ENSTTRP00000008823/1-844 LGVGFCLAIF LLAIWGVKLQ RSWKRIQRQH GLQESSSGQN FFVRNVKARR 751 800 ENSP00000085219/1-847 APLSEGPHSL GCYNPMMEDG ISYTTLRFP- -EMNIPRTGD AESSEMQRPP ENSBTAP00000015781/1-851 TPQAERPASL GCYNPVMEDA VSYATLSFPL GETDTRRLRD AGSSEMREIP bmy_12277T0/1-849 IPQAEGPHSL GCYNPVMEDA VSYAALRFPL GETDAPRPGD AGTSETRGLS ENSTTRP00000008823/1-844 IPQAEGPHSL GCYHPVMEDA VSYAALRFPL GETDAPRPGD AGTSETRGLS 801 850 ENSP00000085219/1-847 PDCDDTVTYS ALHKRQVGDY ENVIPDFPED EGIHYSELIQ FGVGERPQAQ ENSBTAP00000015781/1-851 PSRDDRVTYA VVQNCQVADY ENVTPEVLDD EGIHYSELVH FGNGKRALAQ bmy_12277T0/1-849 PNRDDTVTYS VVQKRQVGDY ENVTPEVLED EGIHYSELVR FGFGERPLAQ ENSTTRP00000008823/1-844 SDRDDTVTYS VVQKRHVGDY ENVTPEVLED EGIHYSEMVH FGFGERPLAQ 851 900 ENSP00000085219/1-847 ENVDYVILKH ENSBTAP00000015781/1-851 EGVEYVTLKH bmy_12277T0/1-849 EGVEYVTLKH ENSTTRP00000008823/1-844 EGVEYVTLKQ