KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:03 2014 Check: 00 .. Name: ENSP00000265560/1-963 Len: 974 Check: 9983 Weight: 1.00 Name: ENSBTAP00000015787/1-963 Len: 974 Check: 2287 Weight: 1.00 Name: ENSTTRP00000016457/1-960 Len: 974 Check: 1579 Weight: 1.00 Name: BACU002401/1-927 Len: 974 Check: 2351 Weight: 1.00 Name: bmy_06004T0/1-732 Len: 974 Check: 383 Weight: 1.00 // 1 50 ENSP00000265560/1-963 ---------- -MAEGGGCRE RPDAETQKSE LGPLMRTTLQ RGAQWYLIDS ENSBTAP00000015787/1-963 ---------- -MAEGGGYRE RPDAETQKSE LGALMRTTLQ RGAQWYLIDS ENSTTRP00000016457/1-960 ---------- -MAEGGGCCE RPDA-TQKSE LGVL-RTTLQ RGAQWYLIDS BACU002401/1-927 MSGPAGPGTR TRWEGGGCRE RPDAETQKSE LGALMRTTLQ RGAQWYLIDS bmy_06004T0/1-732 ---------- -RSSTAPSRN FTTS------ ---------- ---------- 51 100 ENSP00000265560/1-963 RWFKQWKKYV GFDSWDMYNV GEHNLFPGPI DNSGLFSDPE SQTLKEHLID ENSBTAP00000015787/1-963 RWFKQWKKYV GFDSWDMYNV GEHNLYPGPI DNSGLFSDPE SQTLKEHLID ENSTTRP00000016457/1-960 RWFKQWKKYV GFDSWDMYSV GEHNLFPGPI DNSGLFSDPE SQTLKEHLID BACU002401/1-927 RWFKQWKKYV GFDSWDMYSV GEHNLFPGPI DNSGLFSDPE SQTLKEHLID bmy_06004T0/1-732 ---------- ---------- --------PT SSASPYSSVS ASPI------ 101 150 ENSP00000265560/1-963 ELDYVLVPTE AWNKLLNWYG CVEGQQPIVR KVVEHGLFVK HCKVEVYLLE ENSBTAP00000015787/1-963 ELDYVLVPAE AWNKLLNWYG CVEGQQPIVR KVVEHGLFVK HCKVEVYLLE ENSTTRP00000016457/1-960 ELDYVLVPAE AWNKLLNWYG CVEGQQPIVR KVVEHGLFVK HCKVEVYLLE BACU002401/1-927 ELDYVLVPAE AWNKLLNWYG CVEGQRPIVR KVVEHGLFVK HCKVEVYLLE bmy_06004T0/1-732 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000265560/1-963 LKLCENSDPT NVLSCHFSKA DTIATIEKEM RKLFNIPAER ETRLWNKYMS ENSBTAP00000015787/1-963 LKLCENSDPT NVLSCHFSKA DTIATIEKEM RKLFNIPAER ETRLWNKYMS ENSTTRP00000016457/1-960 LKLCENSDPT NVLSCHFSKS DTIATIEKEM RKLFNIPADR ETRLWNKYMS BACU002401/1-927 LKLCENSDPT NVLSCHFSKA DTIATIEKEM RKLFNIPADR ETRLWNKYMS bmy_06004T0/1-732 ----SNGDST NTSGMHSS-- ---------- ---------- ---------- 201 250 ENSP00000265560/1-963 NTYEQLSKLD NTVQDAGLYQ GQVLVIEPQN EDGTWPRQTL QSKSSTAPSR ENSBTAP00000015787/1-963 NTYEQLSKLD NTVQDAGLYQ GQVLVIEPQN EDGTWPRQTQ QSKSSTAPSR ENSTTRP00000016457/1-960 NTYEQLSKLD NTVQDAGLYQ GQVLVIEPQN EDGTWPRQTL QSKSSTAPSR BACU002401/1-927 NTYDQLSKLD NTVQDAGLYQ GQVLVIEPQN EDGTWPRQTL QS-------- bmy_06004T0/1-732 ---------- ------GI-- ---------- ---------- ---------- 251 300 ENSP00000265560/1-963 NFTTSPKSSA SPYSSVSASL IANGDSTSTC GMHSSGVSRG GSGFSASYNC ENSBTAP00000015787/1-963 NFTTSPKSSA SPYSSVSASP IANGDSTNTS GMHSSGVSRG GSGFSASYNC ENSTTRP00000016457/1-960 NFTTSPTSSA SPYSSVSASP ISNGDSTNTS GMHSSGVSRG GSGFSASYNC BACU002401/1-927 ---------- ---------- ---------- ---------N GSGFSASYNC bmy_06004T0/1-732 ---------- ---------- ---------- -------SRG GSGFSASYNC 301 350 ENSP00000265560/1-963 QEPPSSHIQP GLCGLGNLGN TCFMNSALQC LSNTAPLTDY FLKDEYEAEI ENSBTAP00000015787/1-963 QESPLTHVQP GLCGLGNLGN TCFMNSALQC LSNTAPLTDY FLKDEYEAEI ENSTTRP00000016457/1-960 QESPSTHVQP GLCGLGNLGN TCFMNSALQC LSNTAPLTDY FLKDEYEAEI BACU002401/1-927 QESPSIHVQP GLCGLGNLGN TCFMNSALQC LSNTAPLTDY FLKDEYEAEI bmy_06004T0/1-732 QESPSTHVQP GLCGLGNLGN TCFMNSALQC LSNTAPLTDY FLKDEYEAEI 351 400 ENSP00000265560/1-963 NRDNPLGMKG EIAEAYAELI KQMWSGRDAH VAPRMFKTQV GRFAPQFSGY ENSBTAP00000015787/1-963 NRDNPLGMKG EIAEAYAELI KQMWSGRDAH VAPRMFKTQV GRFAPQFSGY ENSTTRP00000016457/1-960 NRDNPLGMKG EIAEAYAELI KQMWSGRDAH VAPRTFKTQV GRFAPQFSGY BACU002401/1-927 NRDNPLGMKG EIAEAYAELI KQMWSGRDAH VAPRMFKTQV GRFAPQFSGY bmy_06004T0/1-732 NRDNPLGMKG EIAEAYAELI KQMWSGRDAH VAPRMFKTQV GRFAPQFSGY 401 450 ENSP00000265560/1-963 QQQDSQELLA FLLDGLHEDL NRVKKKPYLE LKDANGRPDA VVAKEAWENH ENSBTAP00000015787/1-963 QQQDSQELLA FLLDGLHEDL NRVKKKPYLE LKDANGRPDA VVAKEAWENH ENSTTRP00000016457/1-960 QQQDSQELLA FLLDGLHEDL NRVKKKPYLE LKDANGRPDA VVA-EAWENH BACU002401/1-927 QQQDSQELLA FLLDGLHEDL NRVKKKPYLE LKDANGRPDA VVAKEAWENH bmy_06004T0/1-732 QQQDSQELLA FLLDGLHEDL NRVKKKPYLE LKDANGRPDA VVAKEAWENH 451 500 ENSP00000265560/1-963 RLRNDSVIVD TFHGLFKSTL VCPECAKVSV TFDPFCYLTL PLPLKKDRVM ENSBTAP00000015787/1-963 RLRNDSVIVD TFHGLFKSTL VCPECAKVSV TFDPFCYLTL PLPLKKDRVM ENSTTRP00000016457/1-960 RLRNDSVIVD TFHGLFKSTL VCPECAKVSV TFDPFCYLTL PLPLKKDRVM BACU002401/1-927 RLRNDSVIVD TFHGLFKSTL VCPECAKVSV TFDPFCYLTL PLPLKKDRVM bmy_06004T0/1-732 RLRNDSVIVD TFHGLFKSTL VCPECAKVSV TFDPFCYLTL PLPLKKDRVM 501 550 ENSP00000265560/1-963 EVFLVPADPH CRPTQYRVTV PLMGAVSDLC EALSRLSGIA AENMVVADVY ENSBTAP00000015787/1-963 EIFLVPADPR CRPTQYRVVV PLMGAVSDLC EALSKLSGIA AENMVVTDVY ENSTTRP00000016457/1-960 EIFLVPADPR CRPTQYRVIV PLMGAVSDLC EALSRLSGIA AENMVVTDVY BACU002401/1-927 EIFLVPADPR CRPTQYRVIV PLMGAVSDLC EALSRLSGIA AENMVVTDVY bmy_06004T0/1-732 EIFLVPADPR CRPTQYRVIV PLMGAVSDLC EALSRLSGIA AENMVVTDVY 551 600 ENSP00000265560/1-963 NHRFHKIFQM DEGLNHIMPR DDIFVYEVCS TSVDGSECVT LPVYFRERKS ENSBTAP00000015787/1-963 NHRFHKIFQM DEGLNHIMPR DDIFVYEVCS TSPDGSECVT LPVYFRERKS ENSTTRP00000016457/1-960 NHRFHKIFQM DEGLNHIMPR DDIFVYEVCS TSTDGSECVT LPVYFRERKS BACU002401/1-927 NHRFHKIFQM DEGLNHIMPR DDIFVYEVCS TSTDGSECVT LPVYFRERKS bmy_06004T0/1-732 NHRFHKIFQM DEGLNHIMPR DDIFVYEVCS TSTDGSECVT LPVYFRERKS 601 650 ENSP00000265560/1-963 RPSSTSSASA LYGQPLLLSV PKHKLTLESL YQAVCDRISR YVKQPLPDEF ENSBTAP00000015787/1-963 RPSSTSTGAV LYGQPLLVSV PKHKLTLESL YQAVCERISR YIKQPLPDES ENSTTRP00000016457/1-960 RPSSTSTGAV LYGQPLLVSV PKYKLTLESL YQAVCERISR YIKQPLPDES BACU002401/1-927 RPSSTSTGAV LYGQPLLVSV PKHKLTLESL YQAVCERISR YIKQPLPDES bmy_06004T0/1-732 RPSSTSTGAV LYGQPLLVSV PKHKLTLESL YQAVCERISR YIKQPLPDES 651 700 ENSP00000265560/1-963 GSSPLEPGAC NGSRNSCEGE DEEEMEHQEE GKEQLSETEG SGEDEPGNDP ENSBTAP00000015787/1-963 GSSPLELGAC NGSRSGCAGE DEEEMEHQEE GREQLSETEG SGDDEPGSDH ENSTTRP00000016457/1-960 GSSPLELGSC NGSRGSCEGE DEEEMEHQEE GREQLSETED SGEDELGSDH BACU002401/1-927 GSSPLELGAC NGSRGSCEGE DEEEMEHQEE GREQLSETED SGEDELGSDH bmy_06004T0/1-732 GSSPLELGAC NGSRGSCEGE DEEEMEHQEE GREQLSETED SGEDELGSDH 701 750 ENSP00000265560/1-963 SETTQKKIKG QPCPKRLFTF SLVNSYGTAD INSLAADGKL LKLNSRSTLA ENSBTAP00000015787/1-963 GEATQKKNKG RPCPRRLFTF SLVNSYGTAD INSLATDGKL LKLNSRSTLA ENSTTRP00000016457/1-960 GETTQKKLKG RPCPKRLFTF CLVNSYGTAD LNSLAADGKL LKLNSRSTLA BACU002401/1-927 GETTQKKLKS RPCPKRLFTF CLVNSYGTAD LNSLAADGKL LKLNSRSTLA bmy_06004T0/1-732 GETTQKKLKS RPCPKRLFTF CLVNSYGTAD LNSLAADGKL LKLNSRSTLA 751 800 ENSP00000265560/1-963 MDWDSETRRL YYDEQESEAY EKHVSMLQPQ KKKKTTVALR DCIELFTTME ENSBTAP00000015787/1-963 IDWDSETRSC YYNEQESETY EKHVSMLQPQ KKKKTAVALR DCIELFTTME ENSTTRP00000016457/1-960 IDWDSETRSR YYDEQESETY EKHVSMLQPQ KKKKTAVALR DCIELFTTME BACU002401/1-927 IDWDSETRSR YYDEQESETY EKHVSMLQPQ KKKKTAVALR DCIELFTTME bmy_06004T0/1-732 IDWDSETRSR YYDEQESETY EKHVSMLQPQ KKKKTAVALR DCIELFTTME 801 850 ENSP00000265560/1-963 TLGEHDPWYC PNCKKHQQAT KKFDLWSLPK ILVVHLKRFS YNRYWRDKLD ENSBTAP00000015787/1-963 TLGEHDPWYC PNCKKHQQAT KKFDLWSLPK ILVVHLKRFS YNRYWRDKLD ENSTTRP00000016457/1-960 TLGEHDPWYC PNCKKHQQAT KKFDLWSLPK ILVVHLKRFS YNRYWRDKLD BACU002401/1-927 TLGEHDPWYC PNCKKHQQAT KKFDLWSLPK ILVVHLKRFS YNRYWRDKLD bmy_06004T0/1-732 TLGEHDPWYC PNCKKHQQAT KKFDLWSLPK ILVVHLKRFS YNRYWRDKLD 851 900 ENSP00000265560/1-963 TVVEFPIRGL NMSEFVCNLS ARPYVYDLIA VSNHYGAMGV GHYTAYAKNK ENSBTAP00000015787/1-963 TVVEFPVRGL NMSEFVCDPS ARPYVYDLIA VSNHYGAMGV GHYTAYAKNK ENSTTRP00000016457/1-960 TVVEFPVRAL NMSEFVCDLS ARPYVYDLIA VSNHYGAMGV GHYTAYAKNK BACU002401/1-927 TVVEFPVRAL NMSEFVCDLS ARPYVYDLIA VSNHYGAMGV GHYTAYAKNK bmy_06004T0/1-732 TVVEFPVRAL NMSEFVCDLS ARPYVYDLIA VSNHYGAMGV GHYTAYAKNK 901 950 ENSP00000265560/1-963 LNGKWYYFDD SNVSLASEDQ IVTKAAYVLF YQRRDDEFYK TPSLSSSGSS ENSBTAP00000015787/1-963 LNGKWYYFDD SNVSLACEDQ IVTKAAYVLF YQRRDDEFHK TPSLSFPGSS ENSTTRP00000016457/1-960 LNGKWYYFDD SSVSLASEDQ IVTKAAYVLF YQRRDDELYK TTSLSFPGSF BACU002401/1-927 LNGKWYYFDD SSVSLASEDQ IVTKAAYVLF YQRRDDELYK TTSLSFPGSF bmy_06004T0/1-732 LNGKWYYFDD SSVSLASEDQ IVTKAAYVLF YQRRDDELYK TTSLSFPGSF 951 1000 ENSP00000265560/1-963 DGGTRPSSSQ QGFGDDEACS MDTN ENSBTAP00000015787/1-963 DGGARPSSSQ QGTGDDETYS MDTN ENSTTRP00000016457/1-960 DGGTRPGSLQ QGMGDDETCS MDTN BACU002401/1-927 DGGTRPGSLQ QGMGDDETCS MDTN bmy_06004T0/1-732 DGGTRPGSLQ QGMGDDETCS MDTN