KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:57:04 2014 Check: 00 .. Name: ENSP00000317542/1-477 Len: 490 Check: 1874 Weight: 1.00 Name: bmy_06799T0/1-468 Len: 490 Check: 950 Weight: 1.00 Name: ENSBTAP00000015790/1-471 Len: 490 Check: 2286 Weight: 1.00 Name: ENSTTRP00000007585/1-88 Len: 490 Check: 5866 Weight: 1.00 // 1 50 ENSP00000317542/1-477 --MSGVMCLK ASDTWASGIR SQPQGCLGKW RSMRCKHTRM HLAHLGNSRQ bmy_06799T0/1-468 MTPTGTQRPL ADQTYAVPLI QP-------- -DLRREEAIQ QVADALQHLQ ENSBTAP00000015790/1-471 MTPTGTQHSL AGQTYAVPLI QP-------- -DLRREEAIQ QVADALQYLQ ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000317542/1-477 LISLGPPRTR EDGSRISQQV EQSRSQVQAI GEKVSLAQAK IEKIKGSKKA bmy_06799T0/1-468 KVS------G DIFSRISQRV ELSRSQLQAI GERVSLAQAK IEKIKGSKKA ENSBTAP00000015790/1-471 KVS------G DIFSRISQRV ELSRSQLQAI GERVSLAQAK IEKIKGSKKA ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000317542/1-477 IKVFSSAKYP APERLQEYGS IFTDAQDPGL QRRPRHRIQS KQRPLDERAL bmy_06799T0/1-468 IKVFSSAKYP APERLQEYSS IFTGAQDPGL QRRARHRVQS KHRPLDELAL ENSBTAP00000015790/1-471 IKVFSSAKYP APERLQEYGS IFMGAQDPGL QRRPRHRIQS KHRPLDERAL ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000317542/1-477 QEKLKDFPVC VSTKPEPEDD AEEGLGGLPS NISSVSSLLL FNTTENLYKK bmy_06799T0/1-468 QEKLKYFPVC VSTKPEPEDE AEEGLGGLPS NISSVSSLLL FNTTENLYKK ENSBTAP00000015790/1-471 QEKLKFFPVC VNTKPEPEDE AEEGLGGLPS NISSVSSLLL FNTTENLYKK ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000317542/1-477 YVFLDPLAGA VTKTHVMLGA ETEEKLFDAP LSISKREQLE QQVPENYFYV bmy_06799T0/1-468 YVFLDPLAGA VTKTHVMLGA ETEEKLFDAP LSISKREQLE RQVPENYFYV ENSBTAP00000015790/1-471 YVFLDPLAGA VTKTHVMLGA ETEEKLFDAP LSISRREQLE RQVPENYFYV ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000317542/1-477 PDLGQVPEID VPSYLPDLPG IANDLMYIAD LGPGIAPSAP GTIPELPTFH bmy_06799T0/1-468 PDLGQVPEID VPSYLPDLPG VADDLMYSAD LGPGIAPSAP GTIPELPAFH ENSBTAP00000015790/1-471 PDLGQVPDID VPSYLPDLPG VADDLMYSAD LGPGIAPSAP GAIPELPTFH ENSTTRP00000007585/1-88 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000317542/1-477 TEVAEPLKVD LQDGVLT--- PPPPPPPPPP APEVLASAPP LPPSTA--AP bmy_06799T0/1-468 TEVAEPFKP- -EDGVLAV-- PPPPPPPPPP APALLVSALP PPPPAQTVAP ENSBTAP00000015790/1-471 TEVAQPFKPD LEDGVLTARP PPPPPPPPPP APAVLMSVPP PPPPPQ--AP ENSTTRP00000007585/1-88 ---------- ---------- ---------- ----LVSALP PPPPAQTMAP 351 400 ENSP00000317542/1-477 VGQGARQDDS SSSASPS--V QGAPREVVDP SGGWATLLES IRQAGGIGKA bmy_06799T0/1-468 LGQPAREDD- SGGTSPS--V QGAPKEVVEP SSGRATLLES IRQAGGVGKA ENSBTAP00000015790/1-471 PGQPAKGDD- SGGASPSAPV QGAPKEVVDP SSGRATLLES IRQAGGIGKA ENSTTRP00000007585/1-88 LGQPAREDD- SGGASPS--V QGAPKEVVDP SGGRATLLES IRQAGGIGKA 401 450 ENSP00000317542/1-477 KLRSMKERKL EKQQQK-EQE QVRATSQGGH LMSDLFNKLV MRRKGISGKG bmy_06799T0/1-468 KLRSVKARKL EKKQQKQQQE QVRATSQGGD LMSDLFNKLA MRRKGISGKG ENSBTAP00000015790/1-471 KLRSVKERKL EKKKQK-EQE QVRATSQGGD LMSDLFNKLA MRRKGISGKG ENSTTRP00000007585/1-88 KLRSVKERKL EKKKQK-EQK QGRADP---- ---------- ---------- 451 500 ENSP00000317542/1-477 PGAG--DGPG GAFARVSDSI PPLPPPQQ-P QAEDEDDWES bmy_06799T0/1-468 PGPGASEGPG GAFARMSDSI PPLPPLQPAP GEEDEDDWES ENSBTAP00000015790/1-471 PGSGASEGPG GAFARMSDSI PPLPPPQQPP GEEDEDDWES ENSTTRP00000007585/1-88 ---------- ---------- ---------- ----------