KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:06 2014 Check: 00 .. Name: bmy_07189T0/1-147 Len: 209 Check: 2047 Weight: 1.00 Name: ENSP00000256196/1-204 Len: 209 Check: 1881 Weight: 1.00 Name: ENSBTAP00000015794/1-204 Len: 209 Check: 1881 Weight: 1.00 Name: ENSTTRP00000009882/1-204 Len: 209 Check: 1540 Weight: 1.00 Name: BACU005637/1-181 Len: 209 Check: 9029 Weight: 1.00 // 1 50 bmy_07189T0/1-147 ---------- ---------- ---------- ---FLQSYFV TDYDPTIEDS ENSP00000256196/1-204 MAAAGWRDGS GQEKYRLVVV GGGGVGKSAL TIQFIQSYFV TDYDPTIEDS ENSBTAP00000015794/1-204 MAAAGWRDGS GQEKYRLVVV GGGGVGKSAL TIQFIQSYFV TDYDPTIEDS ENSTTRP00000009882/1-204 MAAAGWRDGS GQEKYRLVVV GGGGVGKSAL IIQFIQSYFV TDYDPTIEDS BACU005637/1-181 -VNINFK--- ---------- ---------I RFFFLQSYFV TDYDPTIEDS 51 100 bmy_07189T0/1-147 YTKQCVIDDR AARLDILDTA GQEEFGAMRE QYMRTGEGFL LVFSVTDRGS ENSP00000256196/1-204 YTKQCVIDDR AARLDILDTA GQEEFGAMRE QYMRTGEGFL LVFSVTDRGS ENSBTAP00000015794/1-204 YTKQCVIDDR AARLDILDTA GQEEFGAMRE QYMRTGEGFL LVFSVTDRGS ENSTTRP00000009882/1-204 YTKQCVIDDR AARLDILDTA GQEEFGAMRE QYMRTGEGFL LVFSVTDRGS BACU005637/1-181 YTKQCVIDDR AARLDILDTA GQEEFGAMRE QYMRTGEGFL LVFSVTDRGS 101 150 bmy_07189T0/1-147 FEEIYKFQRQ ILRVKDRDEF PMILIGNKAD LDHQRQVRRN --FAIGKPII ENSP00000256196/1-204 FEEIYKFQRQ ILRVKDRDEF PMILIGNKAD LDHQRQVTQE EGQQLARQLK ENSBTAP00000015794/1-204 FEEIYKFQRQ ILRVKDRDEF PMILIGNKAD LDHQRQVTQE EGQQLARQLK ENSTTRP00000009882/1-204 FEEIYKFQRQ ILRVKDRDEF PMILIGNKAD LDHQRQVTQE EGQQLARQLK BACU005637/1-181 FEEIYKFQRQ ILRVKDRDEF PMILIGNKAD LDHQRQVTQE EGQQLARQLK 151 200 bmy_07189T0/1-147 CNHVS----- ---------E QICLMRKCHD QKHCAE---- ---------C ENSP00000256196/1-204 VTYMEASAKI RMNVDQAFHE LVRVIRKFQE QE-CPPSPEP TRKEKDKKGC ENSBTAP00000015794/1-204 VTYMEASAKI RMNVDQAFHE LVRVIRKFQE QE-CPPSPEP TRKEKDKKGC ENSTTRP00000009882/1-204 VTYMEASAKI RMNVDQAFHE LVRVIRKFQE QE-CPPSPEP TRKEKDKKGC BACU005637/1-181 VTYMEASAKI RMNVDQAFHE LVRVIRKFQE QE-CPPSPEP TRKEKDKKGC 201 250 bmy_07189T0/1-147 GTLDFIEVL ENSP00000256196/1-204 HCVIF---- ENSBTAP00000015794/1-204 HCVIF---- ENSTTRP00000009882/1-204 HCVIF---- BACU005637/1-181 HCVIF----