KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:06 2014 Check: 00 .. Name: ENSTTRP00000007311/1-485 Len: 543 Check: 250 Weight: 1.00 Name: ENSBTAP00000015797/1-509 Len: 543 Check: 1792 Weight: 1.00 Name: bmy_10685T0/1-543 Len: 543 Check: 7044 Weight: 1.00 Name: ENSP00000263640/1-509 Len: 543 Check: 2310 Weight: 1.00 Name: BACU010057/1-342 Len: 543 Check: 1332 Weight: 1.00 // 1 50 ENSTTRP00000007311/1-485 MVDGVMILPV L--------- ---------- ---------- -----MMIAF ENSBTAP00000015797/1-509 MVDGVMILPV L--------- ---------- ---------- -----VMIAF bmy_10685T0/1-543 MKKGVLISPL MKESLHRHGT CVKAKSLRCS GNHKKHGRDR AASSYVIPHT ENSP00000263640/1-509 MVDGVMILPV L--------- ---------- ---------- -----IMIAL BACU010057/1-342 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007311/1-485 PSPSM----- ---------- --------EN GVKTQQ-FFL LSINDGFHVY ENSBTAP00000015797/1-509 PSPSMEDEKP KVNPKLYMCV CEGLSCGDEA HCEGQQCFSS LSINDGFHVY bmy_10685T0/1-543 SAVQMQDEKP KVNPRLYMCV CEGLSCGNED HCEGQQCFSS LSINDGFHVY ENSP00000263640/1-509 PSPSMEDEKP KVNPKLYMCV CEGLSCGNED HCEGQQCFSS LSINDGFHVY BACU010057/1-342 ---------- -------MCV CEGLSCGNED HCEGQQCFSS LSINDGFHIY 101 150 ENSTTRP00000007311/1-485 QKGCFQVYEQ GKMTCKTPPS PGQAVECCQG DWCNRNITAQ LPTKGKSFPG ENSBTAP00000015797/1-509 QKGCFQVYEQ GKMTCKTPPS PGQAVECCQG DWCNRNITAQ LPTKGKSFPG bmy_10685T0/1-543 QKGCFQVYEQ GKMTCKTPPS PGQAVECCQG DWCNRNITAQ LPTKGKSFPG ENSP00000263640/1-509 QKGCFQVYEQ GKMTCKTPPS PGQAVECCQG DWCNRNITAQ LPTKGKSFPG BACU010057/1-342 QKGCFQVYEQ GKMT------ ---------- -W-------- ---------- 151 200 ENSTTRP00000007311/1-485 TQNFHLEVGL IILSVVFAVC LLACLLGVAL RKFKRRNQER LNPRDVEYGA ENSBTAP00000015797/1-509 TQNFHLEVGL IILSVVFAVC LLACLLGVAL RKFKRRNQER LNPRDVEYGT bmy_10685T0/1-543 TQNFHLEVGL IILSVVFAVC LLACLLGVAL RKFKRRNQER LNPRDVEYGT ENSP00000263640/1-509 TQNFHLEVGL IILSVVFAVC LLACLLGVAL RKFKRRNQER LNPRDVEYGT BACU010057/1-342 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000007311/1-485 IEGLITTNVG DSTLAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK ENSBTAP00000015797/1-509 IEGLITTNVG DSTLADLLDH SCTSGSGSGL PFLVQRTVAR QITLLECVGK bmy_10685T0/1-543 IEGLITTNVG DSTLADLLDH SCTSGSGSGL PFLVQRTVAR QITLLECVGK ENSP00000263640/1-509 IEGLITTNVG DSTLADLLDH SCTSGSGSGL PFLVQRTVAR QITLLECVGK BACU010057/1-342 ---------- ---------- ---------- ---------- ---------K 251 300 ENSTTRP00000007311/1-485 GRYGEVWRGS WQGENVAVKI FSSRDEKSWF RETELYNTVM LRHENILGFI ENSBTAP00000015797/1-509 GRYGEVWRGS WQGENVAVKI FSSRDEKSWF RETELYNTVM LRHENILGFI bmy_10685T0/1-543 GRYGEVWRGS WQGENVAVKI FSSRDEKSWF RETELYNTVM LRHENILGFI ENSP00000263640/1-509 GRYGEVWRGS WQGENVAVKI FSSRDEKSWF RETELYNTVM LRHENILGFI BACU010057/1-342 GRYGEVWRGS WQGENVAVKI FSSRDEKSWF RETELYNTVM LRHENILGFI 301 350 ENSTTRP00000007311/1-485 ASDMTSRHSS TQLWLITHYH EMGSLYDYLQ LTTLDTVSCL RIVLSIASGL ENSBTAP00000015797/1-509 ASDMTSRHSS TQLWLITHYH EMGSLYDYLQ LTTLDTVSCL RIVLSIASGL bmy_10685T0/1-543 ASDMTSRHSS TQLWLITHYH EMGSLYDYLQ LTTLDTVSCL RIVLSIASGL ENSP00000263640/1-509 ASDMTSRHSS TQLWLITHYH EMGSLYDYLQ LTTLDTVSCL RIVLSIASGL BACU010057/1-342 ASDMTSRHSS TQLWLITHYH EMGSLYDYLQ LTTLDTVSCL RIVLSIASGL 351 400 ENSTTRP00000007311/1-485 AHLHIEIFGT QGKPAIAHRD LKSKNILVKK NGQCCIADLG LAVMHSQSTN ENSBTAP00000015797/1-509 AHLHIEIFGT QGKPAIAHRD LKSKNILVKK NGQCCIADLG LAVMHSQSTN bmy_10685T0/1-543 AHLHIEIFGT QGKPAIAHRD LKSKNILVKK NGQCCIADLG LAVMHSQSTN ENSP00000263640/1-509 AHLHIEIFGT QGKPAIAHRD LKSKNILVKK NGQCCIADLG LAVMHSQSTN BACU010057/1-342 AHLHIEIFGT QGKPAIAHRD LKSKNILVKK NGQCCIADLG LAVMHSQSTN 401 450 ENSTTRP00000007311/1-485 QLDVGNNPRV GTKRYMAPEV LDETIQVDCF DSYKRVDIWA FGLVLWEVAR ENSBTAP00000015797/1-509 QLDVGNNPRV GTKRYMAPEV LDETIQVDCF DSYKRVDIWA FGLVLWEVAR bmy_10685T0/1-543 QLDVGNNPRV GTKRYMAPEV LDETIQVDCF DSYKRVDIWA FGLVLWEVAR ENSP00000263640/1-509 QLDVGNNPRV GTKRYMAPEV LDETIQVDCF DSYKRVDIWA FGLVLWEVAR BACU010057/1-342 QLDVGNNPRV GTKRYMAPEV LDETIQVDCF DSYKRVDIWA FGLVLWEVAR 451 500 ENSTTRP00000007311/1-485 RMVSNGIVED YKPPFYDVVP NDPSFEDMRK VVCVDQQRPN IPNRWFSDPT ENSBTAP00000015797/1-509 RMVSNGIVED YKPPFYDVVP NDPSFEDMRK VVCVDQQRPN IPNRWFSDPT bmy_10685T0/1-543 RMVSNGIVED YKPPFYDVVP NDPSFEDMRK VVCVDQQRPN IPNRWFSDPT ENSP00000263640/1-509 RMVSNGIVED YKPPFYDVVP NDPSFEDMRK VVCVDQQRPN IPNRWFSDPT BACU010057/1-342 RMVSNGIVED YKPPFYDVVP NDPSFEDMRK VVCVDQQRPN IPNRWFSDPT 501 550 ENSTTRP00000007311/1-485 LTSLAKLMKE CWYQNPSARL TALRIKKTLT KIDNSLDKLK TDC ENSBTAP00000015797/1-509 LTSLAKLMKE CWYQNPSARL TALRIKKTLT KIDNSLDKLK TDC bmy_10685T0/1-543 LTSLAKLMKE CWYQNPSARL TALRIKKTLT KIDNSLDKLK TDC ENSP00000263640/1-509 LTSLAKLMKE CWYQNPSARL TALRIKKTLT KIDNSLDKLK TDC BACU010057/1-342 LTSLAKLMKE CWYQNPSARL TALRIKKTLT KIDNSLDKLK TDC