KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:07 2014 Check: 00 .. Name: ENSP00000367265/1-602 Len: 629 Check: 8006 Weight: 1.00 Name: ENSBTAP00000015804/1-589 Len: 629 Check: 1575 Weight: 1.00 Name: bmy_13426T0/1-534 Len: 629 Check: 5140 Weight: 1.00 Name: BACU000903/1-455 Len: 629 Check: 2675 Weight: 1.00 Name: ENSTTRP00000007179/1-534 Len: 629 Check: 6841 Weight: 1.00 // 1 50 ENSP00000367265/1-602 MPSAKQRGSK GGHGAASPSE KGAHPSGGAD DVAKKPPPAP QQPPPPPAPH ENSBTAP00000015804/1-589 MPSAKQRGSK GGHGAASPSE KGAHPSGGAD DVAKKPPPAP QQHPPPPAPH bmy_13426T0/1-534 ---------- ---------- ---------- ---------- ---------- BACU000903/1-455 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007179/1-534 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367265/1-602 P-QQHPQQHP QNQAHGKGGH RGGGGGGGKS SSSSSASAAA AAAAASSSAS ENSBTAP00000015804/1-589 PQQQHPPQHP QNQAHGKGGH RGG------- ----KSSSSA AAAAASSSAS bmy_13426T0/1-534 ---------M ERNRFAKGP- ---------- ---------- ---------- BACU000903/1-455 ---------- ---------- ---------- ----SSAAAA AAAAASSSAS ENSTTRP00000007179/1-534 ------HQHP QNQAHGKGGH RGG------- -KSSAAAAAA AAAAASSSAS 101 150 ENSP00000367265/1-602 CSRRLGRALN FLFYLALVAA AAFSGWCVHH VLEEVQQVRR SHQDFSRQRE ENSBTAP00000015804/1-589 CSRRLGRVLN FLFYLALVAA AAFSGWCVHH VLEEVQHVRR SHQDFSRQRE bmy_13426T0/1-534 -SLRLGRVLN FLFYLALVAV AAFSGWCVHH VLEEVQQVRR SHQDFSRQRE BACU000903/1-455 CSRRLGRVLN FLFYLALVAA AAFSGWCVHH VLEEVQQVRR SHQDFSRQRE ENSTTRP00000007179/1-534 CSRRLGRVLN FLFYLALVAA AAFSGWCVHN VLEEVQQVQR SHQDFSRQRE 151 200 ENSP00000367265/1-602 ELGQGLQGVE QKVQSLQATF GTFESILRSS QHKQDLTEKA VKQGESEVSR ENSBTAP00000015804/1-589 ELGQGLQGVE QKVQSLQATF GTFESLVRSS QHKHDLTEKA VKQGESEINR bmy_13426T0/1-534 ELGQGLQGVE QKVQSLQATF GTFESFVRSS QHKQDLTEKA VKQGESEINR BACU000903/1-455 ELGQGLQGVE QKVQSLQATF GTFESFLRSS QHKQDLTEKA VKQGESEINR ENSTTRP00000007179/1-534 ELGQGLQGVE QKVQSLQATF GTFESFVRSS QHKQDLTEKA VKQGESEINR 201 250 ENSP00000367265/1-602 ISEVLQKLQN EILKDLSDGI HVVKDARERD FTSLENTVEE RLTELTKSIN ENSBTAP00000015804/1-589 ISEVLQKLQN EILKDLSDGI HVVKDARERD FTSLENTVEE RLTELTKSIN bmy_13426T0/1-534 ISEVLQKLQN EILKDLSDGI HVVKDARERD FTSLENTVEE RLTELTKSIN BACU000903/1-455 ISEVLQKLQN EILKDLSDGI HVVKDARERD FTSLENTVEE RLTELTKSIN ENSTTRP00000007179/1-534 ISEVLQKLQN EILKDLSDGI HVVKDARERD FTSLENTVEE RLTELTKSIN 251 300 ENSP00000367265/1-602 DNIAIFTEVQ KRSQKEINDM KAKVASLEES EGNKQDLKAL KEAVKEIQTS ENSBTAP00000015804/1-589 DNIAIFTDVQ KRSQKEINDV KAKVASLEDS EGYKQDLKAL KEVVKEIQTS bmy_13426T0/1-534 DNIAIFTEVQ KRSQKEINDV KAKVASLEDS EGYKQDLKVL KEAVKEIQTS BACU000903/1-455 DNIAIFTEVQ KRSQKEINDV KAKVASLEDS EGYKQDLKAL KEAVKEIQTS ENSTTRP00000007179/1-534 DNIAIFTEVQ KRSQKEINDV KAKVTSLEDS EGYKQDLKAL REAVKEIQTS 301 350 ENSP00000367265/1-602 AKSREWDMEA LRSTLQTMES DIYTEVRELV SLKQEQQAFK EAADTERLAL ENSBTAP00000015804/1-589 VKSKEKDMEA LRSTIQTMES DVYTEVKELV SLKQEQQRFK EAADSEHHTL bmy_13426T0/1-534 VKSKEKDIEA LRSTVQTMES DVYTEVKELV SLKQEQQRLK EAADSEHHTL BACU000903/1-455 VKSKEKDIEA LRSTVQTMES DVYTEVKELV SLKQEQQRFK EAADSEHHTL ENSTTRP00000007179/1-534 VKSKEKDIEA LRSTVQTMES DVYTEVKELV SLKQEQQRFK EAADSEHHTL 351 400 ENSP00000367265/1-602 QALTEKLLRS EE-------- ---------- ---SVSRLPE EIRRLEEELR ENSBTAP00000015804/1-589 QALTEKILRA EE-------- ---------- ---SAAHLPE EIRRLEEELG bmy_13426T0/1-534 QALMEKVLRA EEAAARLPDE IRGLMEKVLR AEKAAARLPD EIRGLEEELG BACU000903/1-455 QALMEKVLRA EE-------- ---------- ---SAAPLPE EIRGLEEELG ENSTTRP00000007179/1-534 QALMEKVLRA EE-------- ---------- ---SAARLPE EIRRLEEELG 401 450 ENSP00000367265/1-602 QLKSDSHGPK EDGGFRHSEA FEALQQKSQG LDSRLQHVED GVLSMQVASA ENSBTAP00000015804/1-589 QLKAAALRPE EDGAFRPSEA FETLQKESQG LDSRLQSVED GVQAARAASA bmy_13426T0/1-534 QLKAAALRPE EDGVFRPSEA FETLQKESQA LDSRLQSVED GVQAARAAWE BACU000903/1-455 QLKAAALRPE EDGVFRPSEA FETLQKESQG LDSRLQSVED G--------- ENSTTRP00000007179/1-534 QLKAASLRPE EDGVFRPSEA FETLQKESQG LDSRLQSVKD GV-AARAAWE 451 500 ENSP00000367265/1-602 RQTESLESLL SKSQEHEQRL AALQGRLEGL GSS-----EA DQDGLASTVR ENSBTAP00000015804/1-589 RQGESLEALR AQSEEQARRL AELQERVAGL GPD-----AD AEGGLAGTVR bmy_13426T0/1-534 HHRETLEALR AQSEEQAQHL ADLQERVAGL GPAPDADVDA DAGGLAGGVR BACU000903/1-455 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007179/1-534 HHRETVDALR SQSEEQARNL ADLQERVSSM GPS-----DA DAGGLAGRVR 501 550 ENSP00000367265/1-602 SLGETQLVLY GDVEELKRSV GELPSTVESL QKVQEQVHTL LSQDQAQAAR ENSBTAP00000015804/1-589 GLGEAQLSLA GDVDELKRRV AELPGAVEAL QKVQEQVHTL LGREATAV-- bmy_13426T0/1-534 GLGEAQLSLV GDVDELKRRV AELPGAVEAL QKVQEQVRTL LSRD-AAA-- BACU000903/1-455 ------LSLV GDVDELKRRV AELPGAVEAL QKVQEQVRTL LSRD-AAP-- ENSTTRP00000007179/1-534 GFGEAQLSLV GDVDELKRRM AELPGAVEAL QKVQEQVRTL LTRDAAAA-- 551 600 ENSP00000367265/1-602 LPPQDFLDRL SSLDNLKASV SQVEADLKML RTAVDSLVAY SVKIETNENN ENSBTAP00000015804/1-589 -PPQDLLDRL SSLDNLRASV GQVESDLKML RTAVDSLVAY SVKIETNENN bmy_13426T0/1-534 -PPQDLLDRL SSLDNLRASV GQVESDLKML RTAVDSLVAY SVKIETNENN BACU000903/1-455 -PPQDLLDRL SSLDNLRASV GQVEADLKML RTAVDSLVAY SVKIETNENN ENSTTRP00000007179/1-534 -PPQDLLDRL SSLDNLRASV GQVESDLKML RTAVDSLVAY SVKIETNENN 601 650 ENSP00000367265/1-602 LESAKGLLDD LRNDLDRLFV KVEKIHEKV ENSBTAP00000015804/1-589 LESAKGLLED LRNDLDRLFV KVEKIHEKV bmy_13426T0/1-534 LESARSLLED LRNDLDRLFV KVEKIHEKV BACU000903/1-455 LESARSLLED LRNDLDRLFV KVEKIHEKV ENSTTRP00000007179/1-534 LESAKSLLE- LRNDLDRLFV KVEKIHEKV