KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:08 2014 Check: 00 .. Name: BACU004650/1-865 Len: 867 Check: 1853 Weight: 1.00 Name: ENSTTRP00000000289/1-824 Len: 867 Check: 7981 Weight: 1.00 Name: ENSP00000265276/1-828 Len: 867 Check: 9832 Weight: 1.00 Name: ENSBTAP00000015811/1-825 Len: 867 Check: 498 Weight: 1.00 Name: bmy_18298T0/1-614 Len: 867 Check: 2629 Weight: 1.00 // 1 50 BACU004650/1-865 MRMIWELMLC DMDESALTLG TIDVAYLPNS SEYSIGRCKH ASEEWGECVF ENSTTRP00000000289/1-824 ---------- -MDESALTLG MIDV-YLPNS SEYSIGRCKH ASEEWGECRF ENSP00000265276/1-828 ---------- -MDESALTLG TIDVSYLPHS SEYSVGRCKH TSEEWGECGF ENSBTAP00000015811/1-825 ---------- -MDESALTLG TIDVSYLPNS SEYSIGRCKH ATEEWGECGS bmy_18298T0/1-614 ---------- ---------- ---------- ---------- ---------- 51 100 BACU004650/1-865 RPTVFRSATL KWKESLMSRK RPFVGRCCYS CTPQSWDKFF NPSIPSLGLR ENSTTRP00000000289/1-824 RPTVFRSATL KWKESLMSRK RPFVGRCCYS CTPQSWDKFF NPSIPSLGLR ENSP00000265276/1-828 RPTIFRSATL KWKESLMSRK RPFVGRCCYS CTPQSWDKFF NPSIPSLGLR ENSBTAP00000015811/1-825 RPTVFRSATL KWKESLMSRK RPFVGRCCYS CTPQSWDKFF NPSIPSLGLR bmy_18298T0/1-614 ---------- ---------- ---------- ---------- ---------- 101 150 BACU004650/1-865 NVIYINETHT RHRGWLARRL SYVLFVQERD VHKGMFATNV TENVLNSSRV ENSTTRP00000000289/1-824 NVIYINETHT RHRGWLARRL SYVLFVQERD VHKGMFATNV TENVLNSSRV ENSP00000265276/1-828 NVIYINETHT RHRGWLARRL SYVLFIQERD VHKGMFATNV TENVLNSSRV ENSBTAP00000015811/1-825 NVIYINETHT RHRGWLARRL SYVLFIQERD VHKGMFATNV TENVLNSSRV bmy_18298T0/1-614 ---------- ---------- ---------- ---------- ---------- 151 200 BACU004650/1-865 QEAIAEVAAE LNPDGSAQQQ SKAVNKVKKK ARRILQEMVA TVSPALIRLT ENSTTRP00000000289/1-824 QEAIAEVAAE LNPDGSAQQQ SKAVNKVKKK ARKILQEMVA TVSPALIRLT ENSP00000265276/1-828 QEAIAEVAAE LNPDGSAQQQ SKAVNKVKKK AKRILQEMVA TVSPAMIRLT ENSBTAP00000015811/1-825 QEAIAEVAGE LNPDGSAQQQ SKAVNKVKKK ARKILQEMVA TVSPAMIRLT bmy_18298T0/1-614 ---------- ---------- ---------- ---------- ---------- 201 250 BACU004650/1-865 GWVLLKLFNS FFWNIQIHKG QLEMVKAATE MNLPLIFLPV HRSHIDYLLL ENSTTRP00000000289/1-824 GWVLLKLFNS FFWNIQIHKG QLEMVKAATE XXXXXXXXXX XXXXXXXXXX ENSP00000265276/1-828 GWVLLKLFNS FFWNIQIHKG QLEMVKAATE TNLPLLFLPV HRSHIDYLLL ENSBTAP00000015811/1-825 GWVLLKLFNS FFWNIQIHKG QLEMVKAATE MNLPLIFLPV HRSHIDYLLL bmy_18298T0/1-614 ---------- ---------- ---MVKAATE MNLPLLFLPV HRSHIDYLLL 251 300 BACU004650/1-865 TFILFCHNIK APYIASGNNL NIPIFSTLIH KLGGFFIRRR LDETPDGRKD ENSTTRP00000000289/1-824 XXXXXXXXIK APYIASGNNL NIPI-STLIH KLGGFFIRRR LDETPDGRKD ENSP00000265276/1-828 TFILFCHNIK APYIASGNNL NIPIFSTLIH KLGGFFIRRR LDETPDGRKD ENSBTAP00000015811/1-825 TFILFCHNIK APYIASGNNL NIPIFSTLIH KLGGFFIRRR LDETPDGRKD bmy_18298T0/1-614 TFILFCHNIK APYIASGNNL NIPIFSTLIH KLGGFFIRRR LDETPDGRKD 301 350 BACU004650/1-865 ILYRALLHGH IVELLRQQQF LEIFLEGTRS RSGKISCARA GLLSVVVDTL ENSTTRP00000000289/1-824 ILYRALLHGH IVELLRQQQF LEIFLEGTRS RSGKISCARA GLLSVVVDTL ENSP00000265276/1-828 VLYRALLHGH IVELLRQQQF LEIFLEGTRS RSGKTSCARA GLLSVVVDTL ENSBTAP00000015811/1-825 ILYRALLHGH IVELLRQQQF LEIFLEGTRS RSGKISCARA GLLSVVVDTL bmy_18298T0/1-614 ILYRALLHGH IVELLRQQQF LEIFLEGTRS RSGKISCARA GLLSVVVDTL 351 400 BACU004650/1-865 STNTIPDILI IPVGISYDRI IEGHYNGEQL GKPKKNESLW SVARGVIRML ENSTTRP00000000289/1-824 STNTIPDILI IPVGISYDRI IEGHYNGEQL GKPKKNESLW SIARGVIRML ENSP00000265276/1-828 STNVIPDILI IPVGISYDRI IEGHYNGEQL GKPKKNESLW SVARGVIRML ENSBTAP00000015811/1-825 STNTIPDILI IPVGISYDRI IEGHYNGEQL GKPKKNESLW SIARGVIRML bmy_18298T0/1-614 STNTIPDILI IPVGISYDRI IEGHYNGEQL GKPKKNESLW SVARGVIRML 401 450 BACU004650/1-865 RKNYGCVRVD FAQPFSLKEY LESQSQKPVS SPLSLEQALL PAILPSRPND ENSTTRP00000000289/1-824 RKNYGCVRVD FAQPFSLKEY LESQSQKPVS SPLSLEQALL PAILPSRPSD ENSP00000265276/1-828 RKNYGCVRVD FAQPFSLKEY LESQSQKPVS ALLSLEQALL PAILPSRPSD ENSBTAP00000015811/1-825 RKNYGCVRVD FAQPFSLKEY LESQSQKPVS APLSLEQALL PAILPSRPSD bmy_18298T0/1-614 RKNYGCVRVD FAQPFSLKEY LESQSQKPVS SPLSLEQALL PAILPSRPND 451 500 BACU004650/1-865 AAAEGTDSSI NESRDATDES FRRRLIADLA EHILFTASKS CAIMSTHIVA ENSTTRP00000000289/1-824 AAAEGTDTSI NESRNATDES FRRRLIANLA EHILFTASKS CAIMSTHIVA ENSP00000265276/1-828 AADEGRDTSI NESRNATDES LRRRLIANLA EHILFTASKS CAIMSTHIVA ENSBTAP00000015811/1-825 AADEGTDMSI NESRNATDES -RRRLIAHLA EHILFTASKS CAIMSTHIVA bmy_18298T0/1-614 AAAEGXDTSI NESRNATDES FRRRLIANLA EHILFTASKS CAIMSTHIVA 501 550 BACU004650/1-865 CLLLYRHRQG IDLSTLVEDF FVMKEEVLAR DFDLGFSGNS EDVVMHAIQL ENSTTRP00000000289/1-824 CLLLYRHRQG IDLSTLVEDF FVMKEEVLAR DFDLGFSGNS EDVVMHAIQL ENSP00000265276/1-828 CLLLYRHRQG IDLSTLVEDF FVMKEEVLAR DFDLGFSGNS EDVVMHAIQL ENSBTAP00000015811/1-825 CLLLYRHRQG IGLSTLVEDF FVMKEEVLAR DFDLGFSGNS EDVVMHAIQL bmy_18298T0/1-614 CLLLYRHRQG IDLSTLVEDF FVMKEEVLAR DFDLGFSGNS EDVVMHAIQL 551 600 BACU004650/1-865 LGNCITITHT SRNDEFFITP STTVPSVFEL NFYSNGLLHV FIMEAIIACS ENSTTRP00000000289/1-824 LGNCITITHT SRNDEFFITP STTVPSVFEL NFYSNGLLHV FIMEAIIACS ENSP00000265276/1-828 LGNCVTITHT SRNDEFFITP STTVPSVFEL NFYSNGVLHV FIMEAIIACS ENSBTAP00000015811/1-825 LGNCITITHT SKNDEFFITP STTIPSVFEL NFYSNGVLHV FIMEAIIACS bmy_18298T0/1-614 LGNCITITHT SRNDEFFITP STTVPSVFEL NFYSNGLLHV FIMEAIIACS 601 650 BACU004650/1-865 LYAVLKKRGP GAPAS--PSL ISQEQLVRKA ASLCYLLSNE GTISLPCQTF ENSTTRP00000000289/1-824 LYAVLKKRGP GVPVS--PSL ISQEQLVRKA ASLCYLLSNE GTISLPCQTF ENSP00000265276/1-828 LYAVLNKRGL GGPTSTPPNL ISQEQLVRKA ASLCYLLSNE GTISLPCQTF ENSBTAP00000015811/1-825 LYAVLKKRGP GGPAS--PSL VSQEQLVHKA ASLCYLLSNE GTISLPCQTF bmy_18298T0/1-614 LYAVLKKRGP GAPVS--PSL ISQEQLVRKA ASLCYLLSNE GTISLPCQTF 651 700 BACU004650/1-865 YQICHETVGR FIQYGILIVA EPDDQEDTSP GLAEQQWDKK LPEPLSWRSD ENSTTRP00000000289/1-824 YQICHETVGR FIQYGILTVA EPDDQEDISP GVAEQQWDKK LPEPLSWRSD ENSP00000265276/1-828 YQVCHETVGK FIQYGILTVA EHDDQEDISP SLAEQQWDKK LPEPLSWRSD ENSBTAP00000015811/1-825 YQICHETVGR FIQYGILIVA EQDDQEDISP GLAEQQWDKK LPEPLSWRSD bmy_18298T0/1-614 YQICHETVGR FIQYGILIVA EPDDQEDISP GLAEQQWDKK LPEPLSWRSD 701 750 BACU004650/1-865 EEDEDSDFGE EQRDCYLKVS QSKEHQQFIT FLQRLLGPLL EAYSSAAIFI ENSTTRP00000000289/1-824 EEDEDSDFGE EQRDCYLKVS QSKEHQQFIT FLQRLLGPLL EAYSSAAIFI ENSP00000265276/1-828 EEDEDSDFGE EQRDCYLKVS QSKEHQQFIT FLQRLLGPLL EAYSSAAIFV ENSBTAP00000015811/1-825 EEDEDSDFGE EQRDCYLKVS QSKEHQQFIT FLQRLLGPLL EAYSSAAVFI bmy_18298T0/1-614 EEDEDSDFGE EQRDCYLKVS QSKEHQQFIT FLQRLLGPLL EAYSSAAIFI 751 800 BACU004650/1-865 HNFSGPVPEP EYLQKLHKYL ITRTERSVAV YAESATYCLV KNAVKMFKDI ENSTTRP00000000289/1-824 HNFSGPVPEP EYLQKLHKYL ITRTERSVAV YAESATYCLV KNAVKMFKDI ENSP00000265276/1-828 HNFSGPVPEP EYLQKLHKYL ITRTERNVAV YAESATYCLV KNAVKMFKDI ENSBTAP00000015811/1-825 HNFGGPVPEP EFLQKLHKYL ITRTERRVAV YAESATYCLV KNAVKTFKDI bmy_18298T0/1-614 HNFSGPVPEP EYLQKLHKYL ITRTERSVAV YAESATYCLV KNAVKMFKDI 801 850 BACU004650/1-865 GVSVPCLWYK RVCSRLSSFY LDLVYVRHLC VGLNPGRSSF CWINHAGISG ENSTTRP00000000289/1-824 GVFKETKQKR VSVLELSSTF LPQCNRQKLL EYI----LSF VVL------- ENSP00000265276/1-828 GVFKETKQKR VSVLELSSTF LPQCNRQKLL EYI----LSF VVL------- ENSBTAP00000015811/1-825 GVFKETKQKR VSVLELSNTF LPQCNRQKLL EYI----LSF VVL------- bmy_18298T0/1-614 GVFKETKQKR VSVLELSSTF LPQCNRQKLL EYI----LSF VVL------- 851 900 BACU004650/1-865 DWEKGHVEGE THQHRFI ENSTTRP00000000289/1-824 ---------- ------- ENSP00000265276/1-828 ---------- ------- ENSBTAP00000015811/1-825 ---------- ------- bmy_18298T0/1-614 ---------- -------