KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:09 2014 Check: 00 .. Name: ENSP00000434676/1-334 Len: 388 Check: 6782 Weight: 1.00 Name: ENSBTAP00000015823/1-374 Len: 388 Check: 9355 Weight: 1.00 Name: bmy_13048T0/1-285 Len: 388 Check: 1489 Weight: 1.00 Name: BACU020487/1-315 Len: 388 Check: 1999 Weight: 1.00 Name: ENSTTRP00000015932/1-337 Len: 388 Check: 1795 Weight: 1.00 // 1 50 ENSP00000434676/1-334 -----MTSQP SLPADDFDIY HVL-AECTDY YDTLPVKEAD GNQPHFQGVT ENSBTAP00000015823/1-374 MWFHEMASQR SFPEDDFSIY YVL-SECADH YDPCPVNEAE ENQPHLQGVT bmy_13048T0/1-285 --------ML SF----LSMW HQHSTECTDH YDPFPVNEAD ENRPHFQGVT BACU020487/1-315 -----MASRQ PFTADDFSIY YVL-TECTDH YDPFPVNEAD ENRPHFQGVT ENSTTRP00000015932/1-337 -----MASQQ PFTADDFGIY CVL-TECTDH YDPFPVNEAD ENQPHFQGVT 51 100 ENSP00000434676/1-334 GLWNLGNTCC VNAISQCLCS ILPLVEYFLT GKYITALQ-- ---NDCSEVA ENSBTAP00000015823/1-374 GLRNLGNTCY MNAILQCLCS ISPLVEYFLS GKYINALQ-- ---KDCSEVA bmy_13048T0/1-285 GLRNLGNTCY MNAILQCLCS ISPLVEYFLS GKYITALQ-- ---KDCSEVA BACU020487/1-315 GLRNLGNTCY MNAILQCLCS ISPLVEYFLS GKYITESFPF LLPRDCSEVA ENSTTRP00000015932/1-337 GLQNLGNTCY MNAILQCLCS ISPLVEYFLS GKYITALQNF LLPRDCSEVA 101 150 ENSP00000434676/1-334 TAFAYLMTDM WLGDSDCVSP EIFWSALGNL YPAFTKKMQQ DAQEFLICVL ENSBTAP00000015823/1-374 TAFAYVMTDM WLGDSDCVSP EIFRSALGNL YPVFMKKTQQ DAQEFLIYVL bmy_13048T0/1-285 TAFAYVMTDM WLGDSDCVSP EIFWSALGKL YPAFMKKMQQ DAQEFLIYVL BACU020487/1-315 TAFAYVMTDM WLGDSDCVSP EIFWSALGKL YPAFMKKTQQ DAQEFLIYVL ENSTTRP00000015932/1-337 TAFAYVMTDM WLGDSDCVSP EIFWSAFGKL YPAFMKKTQQ DAQEFLIYVL 151 200 ENSP00000434676/1-334 NELHEALKKY HYSRRRSYEK GSTQRCCRKW ITTETSIITQ LFEEQLNYSI ENSBTAP00000015823/1-374 NELHEALKKY H--QRKAYEK RSIPRCCRKM IANESSIITR LFEGQLSYSI bmy_13048T0/1-285 NELHETLKKY H--RRRSYEK RSIPRFCRKM IANESSIITR LFEGQLNYSI BACU020487/1-315 NELHETLKKY H--RRRAYEK RSIPRSCRKM IANESSIITR LFEGQLNYSI ENSTTRP00000015932/1-337 NELHETLKKY H--RRRSYEK RSIPRSCRKM IANESSIITR LFEGQLNYSI 201 250 ENSP00000434676/1-334 VCLKCEKCTY KNEVFTVFSL PIPSKYECSL RDCLQC--FF QQDALTWNNE ENSBTAP00000015823/1-374 VCLKCENCTY KNEVFTIISL PIPSEYECSL QDCLQC--FF QQDTLTW-NF bmy_13048T0/1-285 ICLKCENCTY KNEVFTVLSL PIPSKYECSL QDCLQHTDLE QPDLLFLLRN BACU020487/1-315 ICLKCENCTY KNEVFTVLSL PIPSKYECSL QDCLQC--FF QQDTLTWNNQ ENSTTRP00000015932/1-337 ICLKCENCTY KNEVFTVLSL PIPSKYECSL QDCLQC--FF QQDTLAWDNQ 251 300 ENSP00000434676/1-334 IHCSFCETKQ ETAVRASISK APKIIIFHLK RFDIQGTTKR KLRTDIHYPL ENSBTAP00000015823/1-374 LYSLFL---L EATVRAIISK VPKTIVFHLK RFDILGTMKR KLRTDIHYPL bmy_13048T0/1-285 QARNSCE--- ---------- ---------G QFDILGTMKR KLRTDIHYPL BACU020487/1-315 IYCSFCETKQ ETAVKASISK APKIIVFHLK RFDILGTMKR KLSTDIHYPL ENSTTRP00000015932/1-337 IYCSFCETKQ ETAVKANISK APKIIVF-LK RFDILGTMKR KLRTDIHYPL 301 350 ENSP00000434676/1-334 TNLDLTPYIC SIFRKYPKYN LCAVVNHFGD LDGGHYTAFC KNSVTQA--- ENSBTAP00000015823/1-374 TNLDLTPYIC PIFRKHPKYN LCAVVNHFGD LDGGHYTAFS KNSVTQAWYS bmy_13048T0/1-285 TNLDLTPYIC PVFRKHPKYN LCAVVP---- ---------- ---------- BACU020487/1-315 TNLDLTPYIC PVFRKHPKYN LCAVV----- ---------- ---------- ENSTTRP00000015932/1-337 TNLDLTPYIC PIFRKHPKYN LCAVVNHSGD LDGGHYTAFC KNSVTHAW-- 351 400 ENSP00000434676/1-334 ---------- ---------- ---------- -------- ENSBTAP00000015823/1-374 FDDTRVSEIP DTAVQTAAAY LLFYSCQPFS IPTQKCKT bmy_13048T0/1-285 ---------- ---------- ---------- -------- BACU020487/1-315 ---------- ---------- ---------- -------- ENSTTRP00000015932/1-337 ---------- ---------- ---------- --------