KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:57:22 2014 Check: 00 .. Name: ENSP00000355204/1-370 Len: 374 Check: 1713 Weight: 1.00 Name: ENSBTAP00000015832/1-329 Len: 374 Check: 2081 Weight: 1.00 Name: bmy_11883T0/1-231 Len: 374 Check: 1241 Weight: 1.00 Name: BACU002315/1-193 Len: 374 Check: 6367 Weight: 1.00 // 1 50 ENSP00000355204/1-370 MPTETLQTGS MVKPVSPAGT FTSAVPLRIL NKGPDYFRRQ AEPNPKRLSA ENSBTAP00000015832/1-329 MPTESLQTGS MVKPVSPAGT FTSAVPLRIL NKGPDYFRRQ AEPNPKRLSA bmy_11883T0/1-231 MPTESLQTGS MVKPVSPAGT FTSAVPLRIL NKGPDYFRRQ AEPNPKRLSA BACU002315/1-193 MPTESLQTGS MVKPVSPAGT FTSAVPLRIL NKGPDYFRRQ AEPNPKRLSA 51 100 ENSP00000355204/1-370 VERLEADKAK YVKSQEVINA KQEPVKPAVL AKPPVCPAAK RALGSPTLKV ENSBTAP00000015832/1-329 VERLEADKAK YVKSQEVINA KQEPVKPAVL AKPPVCPAAK RALGSPTLKG bmy_11883T0/1-231 VERLEADKA- ---------- ---------- ---------- ---------- BACU002315/1-193 VERLEADKA- ---------- ---------- ---------- ---------- 101 150 ENSP00000355204/1-370 F---GNHAKT ESGVQRENLK LEILKNIINS SEGSSSGSGH KHSSRNWPPH ENSBTAP00000015832/1-329 FGGGGGGAKS EGGAPRETLK LEILKNILNS SEGSSTGSGH KHSARNW--- bmy_11883T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU002315/1-193 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000355204/1-370 RSEATDLHRH SFAESLKVYP TQGRRSPQEG GSHVGRRLLE QSAESFLHVS ENSBTAP00000015832/1-329 ---------- ---------- ---------- ---------- --ADAFLHVS bmy_11883T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU002315/1-193 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000355204/1-370 HSSSDIRKVT SVKPLKAI-P CSSSAPPLPP KPKIAAIASM KSPEADPVEP ENSBTAP00000015832/1-329 HSSSDIRQGP GARPLKAILP CSSSAPPLPP KPKVAAPAAV KSPEAEAAEP bmy_11883T0/1-231 -NSSDIRKVT GAKPLKAI-P CSSSAPPLPP KPKVAAPAAV RSPEAEAAEP BACU002315/1-193 ---------- ---------- ---------- ---------- KSPEAEAAEP 251 300 ENSP00000355204/1-370 ACGVSRRPSL QRSKSDLSDR YFRVDADVER FFNYCGLDPE ELENLGMENF ENSBTAP00000015832/1-329 AGGVGRRPSL QRSKSDLSDR YFRVDADVER FFNYCGLDPE ELENLGMENF bmy_11883T0/1-231 ACGVGRRPSL QRSKSDLSDR YFRVDADVER FFNYCGLDPE ELETLGMENF BACU002315/1-193 ACGVGRRPSL QRSKSDLSDR YFRVDADVER FFNYCGLDPE ELETLGMENF 301 350 ENSP00000355204/1-370 ARANSDIISL NFRSASMISS DCEQSQDSNS DLRNDDSAND RVPYGISAIE ENSBTAP00000015832/1-329 ARANSDIISL NFRSASMISS DCEQSQDSNS DLRNDDSAND RVPYGISAIE bmy_11883T0/1-231 ARANSDIISL NFRSASMISS DCEQSQDSNS DLRNDDSAND RVPYGISAIE BACU002315/1-193 ARANSDIISL NFRSASMISS DCEQSQDSNS DLRNDDSAND RVPYGISAIE 351 400 ENSP00000355204/1-370 RNARIIKWLY SIKQARESQK VSHV ENSBTAP00000015832/1-329 RNARIIKWLY SIKQARESQK VSHV bmy_11883T0/1-231 RNARIIKWLY SIKQARESQK VSHV BACU002315/1-193 RNARIIKWLY SIKQARESQK VSHV