KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:22 2014 Check: 00 .. Name: ENSP00000216780/1-640 Len: 640 Check: 174 Weight: 1.00 Name: ENSBTAP00000015834/1-640 Len: 640 Check: 9647 Weight: 1.00 Name: ENSTTRP00000008168/1-560 Len: 640 Check: 9629 Weight: 1.00 Name: bmy_16979T0/1-640 Len: 640 Check: 3004 Weight: 1.00 Name: BACU008666/1-640 Len: 640 Check: 2524 Weight: 1.00 // 1 50 ENSP00000216780/1-640 MAALYRPGLR LNWHGLSPLG WPSCRSIQTL RVLSGDLGQL PTGIRDFVEH ENSBTAP00000015834/1-640 MAAVYRPGLR LSWHRLSPWG WASRCSIQTL RVLSGDLGQL PAKVRDFVEH ENSTTRP00000008168/1-560 MAAVYRPGLR LKWRGLSAWG WPSRRSIQTL RVLSGDLGQL PARVRDFVEN bmy_16979T0/1-640 MAAVYRPGLR LRWRGLSPWG WPSRXSIQTL RVLSGDLGQL PARVRDFVEN BACU008666/1-640 MAAVYRPGLR LRWHGLSPWG WPSRRSIQTL RVLSGDLGQL PARVRDFVEN 51 100 ENSP00000216780/1-640 SARLCQPEGI HICDGTEAEN TATLTLLEQQ GLIRKLPKYN NCWLARTDPK ENSBTAP00000015834/1-640 SARLCQPEGI HICDGTEAEN TATLALLEQQ GLIRKLPKYN NCWLARTDPK ENSTTRP00000008168/1-560 SARLCKPENI HICDGTEAEN TAILTLLQQQ GLIRKLPKYN NCWLARTDPK bmy_16979T0/1-640 SARLCQPESI HICDGTEAEN TATLTLLEQQ GLIRKLPKYN NCWLARTDPK BACU008666/1-640 SARLCQPENI HICDGTEAEN TATLTLLEQQ GLIRKLPKYN NCWLARTDPK 101 150 ENSP00000216780/1-640 DVARVESKTV IVTPSQRDTV QLPPGGARGQ LGNWMSPADF QRAVDERFPG ENSBTAP00000015834/1-640 DVARVESKTV IVTPSQRDTV PLPAGGARGQ LGNWMSPAEF QQAVDERFPG ENSTTRP00000008168/1-560 DVARVESKTV IVTPSQRDTV PLPAGGARGQ LGNWMSPAEF QQAVDERFPG bmy_16979T0/1-640 DVARVESKTV IVTPSQRDTV PLPAGGARGQ LGNWMSPAEF QQAVDERFPG BACU008666/1-640 DVARVESKTV IVTPSQRDTV PLPAGGARGQ LGNWMSPAEF QQAVDERFPG 151 200 ENSP00000216780/1-640 CMQGRTMYVL PFSMGPVGSP LSRIGVQLTD SAYVVASMRI MTRLGTPVLQ ENSBTAP00000015834/1-640 CMLGRTMYVI PFSMGPVGSP LSRIGVQLTD SAYVVASMRI MTRLGTPVLQ ENSTTRP00000008168/1-560 CMQGRTMYVL PFSMGPVGSP LSRTGVQLTD SAYVVASMRI MTRLGTPVLQ bmy_16979T0/1-640 CMQGRTMYVL PFSMGPVGSP LSRIGVQLTD SAYVVASMRI MTRLGTPVLQ BACU008666/1-640 CMQGRTMYVL PFSMGPVGSP LSRIGVQLTD SAYVVASMRI MTRLGTPVLQ 201 250 ENSP00000216780/1-640 ALGDGDFVKC LHSVGQPLTG QGEPVSQWPC NPEKTLIGHV PDQREIISFG ENSBTAP00000015834/1-640 ALGDGDFVKC LHSVGQPLTG QGEPVSQWPC NPEKTLIGHV PDQREIISFG ENSTTRP00000008168/1-560 ALGDGDFVKC LHSVGQPLTG QGEPVSQWPC NPEKTLIGHV PDQWEIVSFG bmy_16979T0/1-640 ALGDGDFVKC LHSVGQPLTG QGEPVSQWPC NPEKTLIGHV PDQREIVSFG BACU008666/1-640 ALGDGDFVKC LHSVGQPLTG QGEPVSQWPC NPEKTLIGHV PDEREIVSFG 251 300 ENSP00000216780/1-640 SGYGGNSLLG KKCFALRIAS RLARDEGWLA EHMLILGITS PAGKKRYVAA ENSBTAP00000015834/1-640 SGYGGNSLLG KKCFALRIAS RLARDEGWLA EHMLILGITN PAGKKRYVAA ENSTTRP00000008168/1-560 SGYGGNSLLG KKCFALRIAS RLARDEGWLA EHMLILGITS PAGKKRYVAA bmy_16979T0/1-640 SGYGGNSLLG KKCFALRIAS RLARDEGWLA EHMLILGITN PAGKKRYVAA BACU008666/1-640 SGYGGNSLLG KKCFALRIAS RLARDEGWLA EHMLILGITN PAGKKRYVAA 301 350 ENSP00000216780/1-640 AFPSACGKTN LAMMRPALPG WKVECVGDDI AWMRFDSEGR LRAINPENGF ENSBTAP00000015834/1-640 AFPSACGKTN LAMMRPALPG WKVECVGDDI AWMRFDSDGR LRAINPENGF ENSTTRP00000008168/1-560 AFPSACGKTN LAMMRPALPG WRVECVGDDI AWMRFDSDGR LRAINPENGF bmy_16979T0/1-640 AFPSACGKTN LAMMRPALPG WRVECVGDDI AWMRFDSDGR LRAINPENGF BACU008666/1-640 AFPSACGKTN LAMMRPALPG WRVECVGDDI AWMRFDSDGR LRAINPENGF 351 400 ENSP00000216780/1-640 FGVAPGTSAT TNPNAMATIQ SNTIFTNVAE TSDGGVYWEG IDQPLPPGVT ENSBTAP00000015834/1-640 FGVAPGTSAT TNPNAMATIQ SNTIFTNVAE TSDGGVYWEG IDQPLPPGIT ENSTTRP00000008168/1-560 FGVAPGTSAT TNPNAMATIQ SNTLFTNVAE TSDGGVYWEG IDQPLPPGVT bmy_16979T0/1-640 FGVAPGTSAT TNPNAMATIQ SNTLFTNVAE TSDGGVYWEG IDQPLSPGVT BACU008666/1-640 FGVAPGTSAT TNPNAMATIQ SNTLFTNVAE TSDGGVYWEG IDQPLSPGVT 401 450 ENSP00000216780/1-640 VTSWLGKPWK PGDKEPCAHP NSRFCAPARQ CPIMDPAWEA PEGVPIDAII ENSBTAP00000015834/1-640 VTSWLGKPWK PGDKEPCAHP NSRFCAPARQ CPIIDPAWEA PEGVPIDAII ENSTTRP00000008168/1-560 VTSWLGKPWK PGDKEPCAHP NSRFCAPARQ CPIIDPAWEA PEGVPIDAII bmy_16979T0/1-640 VTSWLGKPWK PGDKEPCAHP NSRFCAPARQ CPIIDPAWEA PEGVPIDAII BACU008666/1-640 VTSWLGKPWK PGDKEPCAHP NSRFCAPARQ CPIIDPAWEA PEGVPIDAII 451 500 ENSP00000216780/1-640 FGGRRPKGVP LVYEAFNWRH GVFVGSAMRS ESTAAAEHKG KIIMHDPFAM ENSBTAP00000015834/1-640 FGGRRPKGVP LVYEAFNWRH GVFVGSAMRS EATAAAEHKG KVIMHDPFAM ENSTTRP00000008168/1-560 FGGRRPKGVP LVYEAFNWRH GVFVGSAMRS EATAAAEHKG KVIMHDPFAM bmy_16979T0/1-640 FGGRRPKGVP LVYEAFNWRH GVFVGSAMRS EATAAAEHKG KVIMHDPFAM BACU008666/1-640 FGGRRPKGVP LVYEAFNWRH GVFVGSAMRS EATAAAEHKG KVIMHDPFAM 501 550 ENSP00000216780/1-640 RPFFGYNFGH YLEHWLSMEG RKGAQLPRIF HVNWFRRDEA GHFLWPGFGE ENSBTAP00000015834/1-640 RPFFGYNFGR YLEHWLSMEG RKGVQLPRIF HVNWFRRDEA GRFLWPGFGE ENSTTRP00000008168/1-560 RPFFGYNFGR YLEHWLSMEG LKGARLPRIF HVNWFRRDEA GHFLWPGFGE bmy_16979T0/1-640 RPFFGYNFGR YLEHWLSMEG LKGARLPRIF HVNWFRRDEA GHFLWPGFGE BACU008666/1-640 RPFFGYNFGR YLEHWLSMEG LKGARLPRIF HVNWFRRDEA GHFLWPGFGE 551 600 ENSP00000216780/1-640 NARVLDWICR RLEGEDSARE TPIGLVPKEG ALDLSGLRAI DTTQLFSLPK ENSBTAP00000015834/1-640 NARVLDWICR RLDGEESARE TPIGLVPKEG ALDLSSLGAI DTTQLFSLPK ENSTTRP00000008168/1-560 NVRVLDWICR ---------- ---------- ---------- ---------- bmy_16979T0/1-640 NARVLDWICR RLEGEDSAQE TPIGLVPKEG ALDLSGLGAI DTTQLFSLPK BACU008666/1-640 NARVLDWICR RLEGEDSAQE TPIGLVPKEG ALDLSGLGAI DTTQLFSLPK 601 650 ENSP00000216780/1-640 DFWEQEVRDI RSYLTEQVNQ DLPKEVLAEL EALERRVHKM ENSBTAP00000015834/1-640 DFWQQEVHDI RSYLTEQVNQ DLPKEVLAEL EALEGRVRRM ENSTTRP00000008168/1-560 ---------- ---------- ---------- ---------- bmy_16979T0/1-640 DFWEQEVRDI RSYLTEQVNQ DLPKEVVAEL EALEGRVRRM BACU008666/1-640 DFWEQEVRDI RSYLTEQVNQ DLPKEVVAEL EALEGRVRRM