KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:33 2014 Check: 00 .. Name: ENSP00000370115/1-379 Len: 877 Check: 9994 Weight: 1.00 Name: ENSBTAP00000015889/1-245 Len: 877 Check: 4094 Weight: 1.00 Name: ENSTTRP00000003632/1-377 Len: 877 Check: 4517 Weight: 1.00 Name: bmy_04302T0/1-378 Len: 877 Check: 7508 Weight: 1.00 Name: BACU005103/1-876 Len: 877 Check: 4410 Weight: 1.00 // 1 50 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 MLGREDNSGN LFSLPLNLSS ALAVAFLGTK GDTAAQMAQM CVPVTQEEPG 51 100 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 AAKPAAFRSA AGSLLQKEIL CQDDPSRNVF YSPVSISSAL AMVFLGAKGD 101 150 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 TAAQLAQVLS LNTEKDIHED FRALLTELNK PGTQYLLRTA NRLFGEKTCE 151 200 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 FLSIFKEACL WFYHTELEQL SFAKAAEPSR KQINAWVSKK TEGKIPELLP 201 250 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 GNSIDAQTRL VLINTVYFKG RWNEQFNEAY TREMPFRVNR KEQRLVQMMF 251 300 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 QEGTFRLAHI EEVQAQVLEL PYAGEELSMV ILLPDDHVAL SSVEKHLTFE 301 350 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 KFLAWTHPDC MKSTEVEVFL PRFKLEEAYD LGSVLQGLGV VDAFQQGRAD 351 400 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 FSAMSADSDL CLSRFAHKSL VEVNEEGTEA AAALAVTVVR KELMNEKLSD 401 450 ENSP00000370115/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 ---------- ---------- ---------- ---------- ---------- bmy_04302T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU005103/1-876 GQSQEQGNYK AKADFSGMLS GRELPCPVRA QALRGGVTED TCHLLLVRLP 451 500 ENSP00000370115/1-379 ---------- ---------- MEQLSSANTR FALDLFLALS ENNPAGNIFI ENSBTAP00000015889/1-245 ---------- ---------- MEQLSAANTR FAVDLFLTLT EHNPAGNIFI ENSTTRP00000003632/1-377 ---------- ---------- MEQLSAANTR FALDLFRALN KSDPAGNIFI bmy_04302T0/1-378 ---------- ---------- MEQLSAANTR FALDLFRTLN KSDPAGNIFI BACU005103/1-876 DLTPGPVLGS HSHILHQLLT MEQLSTANTR FALDLFRTLN KSDPAGNIFI 501 550 ENSP00000370115/1-379 SPFSISSAMA MVFLGTRGNT AAQLSKTF-- ---------- ---------- ENSBTAP00000015889/1-245 SPFSISSALA MVFLGARGDT AAQMSKAL-- ---------- ---------- ENSTTRP00000003632/1-377 SPFSISSALA MVFLGTRGNT AAQMSKAL-- ---------- ---------- bmy_04302T0/1-378 SPFSISSALA MTFLGTRGNT AAQVSKAL-- ---------- ---------- BACU005103/1-876 SPFSISSALA MTFLGARGST AAQVSKSFPS SCLPQTVPES CAFELLQRIC 551 600 ENSP00000370115/1-379 ---HFNT--- VEEVHSRFQS LNADINKRGA SYILKLANRL YGEKTYNFLP ENSBTAP00000015889/1-245 ---HFEG--- V-EIHSGFQS LNADINKCGA PYTLKLANRL FGEKSYDFLP ENSTTRP00000003632/1-377 ---YFKE--- VEEIHSEFQS LNADINKHGA PYILKLANRL YGEKSYDFLP bmy_04302T0/1-378 ---YFKG--- VEEIHSRFQS LNADINKHGA PYILKLANRL FGEKSYDFLP BACU005103/1-876 RKLYFGVQHW VEEIHSRFQS LNADINKHGA PYILKLANRL FGEKSYDFLP 601 650 ENSP00000370115/1-379 EFLVSTQKTY GADLASVDFQ HASEDARKTI NQWVKGQTEG KIPELLASGM ENSBTAP00000015889/1-245 EFLASTQEMY SAELASVDFL RAPEDARKTI NAWVKEQTGG KIPELLASGM ENSTTRP00000003632/1-377 EFLASTQKMY GAELASVDFL QAAEDARKTI NEWVKGQTEG KIPELLASGG bmy_04302T0/1-378 EFLASTQKMY GAELASVDFL QATEDARKAI NEWVKGQTEG KIPELLASGT BACU005103/1-876 EFLASTQKMY GAELASVDFL QATEDARKAI NEWVKGQTEG KIPELLASGT 651 700 ENSP00000370115/1-379 VDNMTKLVLV NAIYFKGNWK DKFMKEATTN APFRLNKKDR KTVKMMYQKK ENSBTAP00000015889/1-245 VDSLTKLVLV NAIYFKGKWQ EKFMVEATKD APFRLNKKET KTVKMMYQKK ENSTTRP00000003632/1-377 VDSMTKLVLV NAIYFKGNWQ EKFMMEATED AAFRLNKKDT KLVKMMYQKK bmy_04302T0/1-378 VDSMTKLVLV NAIYFKGNWQ EKFMMEATKD APFRLNKKDT KTVKMMYQKK BACU005103/1-876 VDSMTKLVLV NAIYFKGNWQ EKFMMEATKD APFRLNKKDT KTVKMMYQKK 701 750 ENSP00000370115/1-379 KFAYGYIEDL KCRVLELPYQ GEELSMVILL PDDIEDESTG LKKIEEQLTL ENSBTAP00000015889/1-245 KFPFGYIKDL KCRVLELPYE GKDLSMVILL PDDIQDEATG LKKV------ ENSTTRP00000003632/1-377 RFPLGYIKDL KCRVLELPYE GEDLSMVILL PDDILDESTG LRKIEQQLTL bmy_04302T0/1-378 KFPFGYIEDL KCRVLELPYQ GKGLSMVILL PDDIQDESTG LKKIEQQLTL BACU005103/1-876 KFPFGYIKDL KCRVLELPYQ GEDLSMVILL PDDIQDESTG LKKIEQQLTL 751 800 ENSP00000370115/1-379 EKLHEWTKPE NLDFIEVNVS LPRFKLEESY TLNSDLARLG VQDLFNSSKA ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 EKLREWTRPE NLDLLEVNVQ LPRFKLEESY ELSTLLASLG MQDLF-SGKA bmy_04302T0/1-378 EKLREWTRPE NLDLLEVNVQ LPRFRLEESY ELSTPLACLG VQELF-SSKA BACU005103/1-876 EKLREWTRPE NLDLLEVNVQ LPRFRLEESY ELSTPLACLG VQELF-SSKA 801 850 ENSP00000370115/1-379 DLSGMSGARD IFISKIVHKS FVEVNEEGTE AAAATAGIAT FCMLMPEENF ENSBTAP00000015889/1-245 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003632/1-377 DLSGISGAGG LSVSKVVHKS FVEVNEEGTE AAAATSVAVN YCMLLTEEYF bmy_04302T0/1-378 DLSGMSGARG LFISKVVHKS FVEVNEEGTE AAAATASVAT FAMLAPEEDF BACU005103/1-876 DLSGMSGARG LFISKVVHQS FVEVNEEGTE AAAATANVAI FAMLMPEEDF 851 900 ENSP00000370115/1-379 TADHPFLFFI RHNSSGSILF LGRFSSP ENSBTAP00000015889/1-245 ---------- ---------- ------- ENSTTRP00000003632/1-377 TADHPFIFFI RHNPSTNILF LGRLSS- bmy_04302T0/1-378 TADHPFIFFI RHNPSANILF LGRLSSP BACU005103/1-876 TADHPFIFFI RHNPSANILF LGRLSSP