KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:41 2014 Check: 00 .. Name: ENSP00000238628/1-213 Len: 214 Check: 3000 Weight: 1.00 Name: ENSTTRP00000014536/1-213 Len: 214 Check: 2345 Weight: 1.00 Name: bmy_03507T0/1-139 Len: 214 Check: 8757 Weight: 1.00 Name: ENSBTAP00000015927/1-207 Len: 214 Check: 8168 Weight: 1.00 Name: BACU010828/1-186 Len: 214 Check: 1836 Weight: 1.00 // 1 50 ENSP00000238628/1-213 MEDLLDLDEE LRYSLATSRA KMGRRAQQES AQAENHLNGK NSSLTLTGET ENSTTRP00000014536/1-213 MEDVLDLGEE RRRGSATSGA KMGRRAQQES AQAENHLTGK NSSSTLTAEX bmy_03507T0/1-139 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015927/1-207 MEDLLDLGEE RRRGPATSGA KMGRRAQQES TQAENHLSGK NSSLTLTAEV BACU010828/1-186 ---------- ---------- -MGRRAQQES AQAENHLTGK NSSSILTAEA 51 100 ENSP00000238628/1-213 SSAKLPRCRQ GGWAGDSVKA SNGTQTGKQQ LDLNACYHKT HHRDLGLASL ENSTTRP00000014536/1-213 XXXXXXX-XX XXXXXXXXXX XXCTKTSQQQ LDVKAGYHEI RCRDLGPGSL bmy_03507T0/1-139 ---------- -MW-----KV ISNQWRSR-- -Q----DPPF VPLTF-LAPP ENSBTAP00000015927/1-207 PPPKPPR-RQ GRWAEASVKV SKSQRRASEE IQ----DHRL RQQSL-DRSD BACU010828/1-186 PPPKPPR-RQ GGWADDSVKA SRSGRRASEE IE----DHRL RQQSL-DGPD 101 150 ENSP00000238628/1-213 EEADIPIIPD LEEVQEEDFV LQVAAPPSIQ IKRVMTYRDL DNDLMKYSAI ENSTTRP00000014536/1-213 QEADIPVIPD LEEVQEEDFV LQVAAPPSIQ VNRVMTYRDL DNDLMKYAAF bmy_03507T0/1-139 LIADIPVIPD LEEVQEEDFV LQVAAPPSIQ VNRVMTYRDL DNDLMKYAAF ENSBTAP00000015927/1-207 DGGDIPVIPD LEEVQEEDFV LQVAAPPSIQ VNRVMTYRDL DNDLMKYSAF BACU010828/1-186 DGGDIPVIPD LEEVQEEDFV LQVAAPPSIQ VNRVMTYRDL DNDLMKYAAF 151 200 ENSP00000238628/1-213 QTLDGEIDLK LLTKVLAPEH EVREDDVGWD WDHLFTEVSS EVLTEWDPLQ ENSTTRP00000014536/1-213 QTLDGEIDLK LLTKVLAPEH EVREDDVSWD WDRLYTEVSS ELLSEWDVLQ bmy_03507T0/1-139 QTLDGEIDLK LLTKVLAPEH EVREDDVSWD WDRLYTEVSS ELLSEWDVLQ ENSBTAP00000015927/1-207 QTLDGEIDLK LLTKVLAPEH EVREDDVSWD WDHLYTEVSS ELLSEWDALQ BACU010828/1-186 QTLDGEIDLK LLTKVLAPEH EVREDDVSWD WDRLYTEVSS ELLSEWDVLQ 201 250 ENSP00000238628/1-213 TEKEDPAGQ- ARHT ENSTTRP00000014536/1-213 TDKEDPVGQQ PSHT bmy_03507T0/1-139 ADKEDPVGQ- PSHT ENSBTAP00000015927/1-207 TEKEGPVGQ- PAHT BACU010828/1-186 ADKEDPVGQ- PSHT