KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:45 2014 Check: 00 .. Name: ENSBTAP00000015948/1-456 Len: 481 Check: 9555 Weight: 1.00 Name: ENSP00000350024/1-456 Len: 481 Check: 8131 Weight: 1.00 Name: ENSTTRP00000013685/1-419 Len: 481 Check: 4982 Weight: 1.00 Name: bmy_07798T0/1-477 Len: 481 Check: 9314 Weight: 1.00 Name: BACU003508/1-480 Len: 481 Check: 5208 Weight: 1.00 // 1 50 ENSBTAP00000015948/1-456 ---------- --------MA RGDAPRD--- ---SYHLVGI SFFILGLGTL ENSP00000350024/1-456 ---------- --------MA RGDAPRD--- ---SYHLVGI SFFILGLGTL ENSTTRP00000013685/1-419 ---------- --------MA RGDAPQD--- ---SYHLVGI SFFILGLGTL bmy_07798T0/1-477 MGVVVRSLEE LPWEVGGAAE AGRPPGDLLN DPHSYHLVGI SFFILGLGTL BACU003508/1-480 MGAVVRSLEE LPWEVGGAAE AGRPPGDLLN DPHSYHLVGI SFFILGLGTL 51 100 ENSBTAP00000015948/1-456 LPWNFFITAI PYFKGRQLGA -ESSGSPEET ATQSSINTQX FNNWVTLLSQ ENSP00000350024/1-456 LPWNFFITAI PYFQARLAGA GNSTARILST NHTGPEDAFN FNNWVTLLSQ ENSTTRP00000013685/1-419 LPWNFFITAI PYFQGRLAGA -NGTTETLGT NHTSPADTFN FNNWVTLLSQ bmy_07798T0/1-477 LPWNFFITAI PYFQGRLAGA -NGTTETLGT NHTSPADTFN FNNWVTLLSQ BACU003508/1-480 LPWNFFITAI PYFQGRLAGA -NGTTETLGT NHTSPADTFN FNNWVTLLSQ 101 150 ENSBTAP00000015948/1-456 LPLLLFTLLN SFLYQCIPET VRILGSLLII LFLFTLTAVL VKVDMSPGLF ENSP00000350024/1-456 LPLLLFTLLN SFLYQCVPET VRILGSLLAI LLLFALTAAL VKVDMSPGPF ENSTTRP00000013685/1-419 LPLLLFTLLN SFLYQCISET VRILGSLLVI LLLFTLTAVL VKVDMSPEPF bmy_07798T0/1-477 LPLLFFTLLN SFL---IPET VRILGSLLAI LLLFTLTAVL VKVDMSPGPF BACU003508/1-480 LPLLFFTLLN SFLYQCVPET VRILGSLLAI LLLFTLTAVL VKVDMSPGPF 151 200 ENSBTAP00000015948/1-456 FSITMASVWF INSFGAVLQG SLFGQLGTMP SKYSTIFLSG QGLAGIFAAL ENSP00000350024/1-456 FSITMASVCF INSFSAVLQG SLFGQLGTMP STYSTLFLSG QGLAGIFAAL ENSTTRP00000013685/1-419 FSITMASVWF INSFCAVLQG SLFGQLGTMP STYSTLFLSG QGLAGIFAAL bmy_07798T0/1-477 FSITMASVWF INSFCAVLQG SLFGQLGMMP STYSTLFLSG QGLAGIFAAL BACU003508/1-480 FSITMASVWF INSFCAVLQG SLFGQLGTMP STYSTLFLSG QGLAGIFAAL 201 250 ENSBTAP00000015948/1-456 AMLISMASGV DAQTSALGYF ITPCVGTVMS IVCYLSLPHL KFARYYLAKK ENSP00000350024/1-456 AMLLSMASGV DAETSALGYF ITPCVGILMS IVCYLSLPHL KFARYYLANK ENSTTRP00000013685/1-419 AMLMSMASGV DAQTSALGYF ITPCVGILMS IVCYLSLPHL KFARYYLAKK bmy_07798T0/1-477 AMLMSMASGV DAQTSALGYF ITPCVGILMS IVCYLSLPHL KFARYYLAKK BACU003508/1-480 AMLMSMASGV DAQTSALGYF ITPCVGVLMS IVCYLSLPHL KFARYYLAKK 251 300 ENSBTAP00000015948/1-456 PSKAHGQELE TKAELLQSDE KNGIPNSPQR AALTLDLDLE KETEVEPEEP ENSP00000350024/1-456 SSQAQAQELE TKAELLQSDE -NGIPSSPQK VALTLDLDLE KEPESEPDEP ENSTTRP00000013685/1-419 PSKAQGQELE TKAELLKPDE KNGIPNSPQR AVLTLDLDPE KETEMEPEEP bmy_07798T0/1-477 PSKAQGQELE TKAELLKSDE KNGIPNSPQK AALTLDLDPE KETEMEPEEP BACU003508/1-480 PSKAQGQELE TKAELLKSDE KNGIPNSPQK AALTLDLDPE KETEMEPEEP 301 350 ENSBTAP00000015948/1-456 QKPEKPSVFI VLRKIWLTAL CLVLVFTVTL SVFPAITAMV TSSTGPGKWS ENSP00000350024/1-456 QKPGKPSVFT VFQKIWLTAL CLVLVFTVTL SVFPAITAMV TSSTSPGKWS ENSTTRP00000013685/1-419 QKPGKPSVFI VFQKIWLTAL CLVLVFTVTL SVFPAITAMV TSSTSPGKWS bmy_07798T0/1-477 QKPGKPSVFI VFQKIWLTAL CLVLVFTVTL SVFPAITAMV TSSTSPGKWS BACU003508/1-480 QKPGKPSVFI VFQKIWLTAL CLVLVFTVTL SVFPAITAMV TSSTSPGKWS 351 400 ENSBTAP00000015948/1-456 QFFNPICCFL LFNVMDCLGR SLTSYFLWPD EDSRLLPLLV CLRVLFVPLF ENSP00000350024/1-456 QFFNPICCFL LFNIMDWLGR SLTSYFLWPD EDSRLLPLLV CLRFLFVPLF ENSTTRP00000013685/1-419 QFFNPICCFL LFNVMDCLGR SLTSYFLWPD KDSRLLPLLV CLRVLFVPLF bmy_07798T0/1-477 QFFNPICCFL LFNVMDCLGR SLTSYFLWPD EDSRLLPLLV CLRVLFVPLF BACU003508/1-480 QFFNPICCFL LFNVMDCLGR SLTSYFLWPD EDSRLLPLLV CLRVLFVPLF 401 450 ENSBTAP00000015948/1-456 MLCHVPERSR LPILFPQDAY FITFMLLFAV SNGYLVSLTM CLAPRQVLPQ ENSP00000350024/1-456 MLCHVPQRSR LPILFPQDAY FITFMLLFAV SNGYLVSLTM CLAPRQVLPH ENSTTRP00000013685/1-419 MLCHVPKRSR LPILFPQDAY FITFMLLFAV SNGYLVSLTM CLAP------ bmy_07798T0/1-477 MLCHVPERSR LPILFPQDAY FITFMLLFAV SNGYLVSLTM CLAPRQVLPH BACU003508/1-480 MLCHVPERSR LPILFPQDAY FITFMLLFAV SNGYLVSLTM CLAPRQVLPH 451 500 ENSBTAP00000015948/1-456 EREVTGTLMT FFLALGLSCG ASLSFLFKAL L ENSP00000350024/1-456 EREVAGALMT FFLALGLSCG ASLSFLFKAL L ENSTTRP00000013685/1-419 ---------- ---------- ---------- - bmy_07798T0/1-477 EREVAGTLMT FFLALGLSCG ASLSFLFKAL L BACU003508/1-480 EREVAGTLMT FFLALGLSCG ASLSFLFKAL L