KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:57:45 2014  Check: 00 ..

 Name: ENSP00000229402/1-225     Len:    225  Check:  8417  Weight:  1.00
 Name: ENSBTAP00000015955/1-225  Len:    225  Check:  4808  Weight:  1.00
 Name: bmy_05530T0/1-177         Len:    225  Check:  9706  Weight:  1.00
 Name: ENSTTRP00000014917/1-224  Len:    225  Check:  2774  Weight:  1.00

//


                          1                                                   50
ENSP00000229402/1-225     MDQQAIYAEL NLPTDSGPES SSPSSLPRDV CQGSPWHQFA LKLSCAGIIL 
ENSBTAP00000015955/1-225  MESQLVYADL NLPRDSGIER SSPPSLLQNL CQGPRWHNFP LKFSCAVIIL 
bmy_05530T0/1-177         MDRQVIYADL NVSRNAGLES SSPPSLPQNV CQGPPWHKFA LKLGCAGIIL 
ENSTTRP00000014917/1-224  MDKPVIYADL NISRNAGLES SSPPSLPQNV CQGPPWHKFA LKLCCAGIIL 


                          51                                                 100
ENSP00000229402/1-225     LVLVVTGLSV SVTSLIQKSS IEKCSVDIQQ SRNKTTERPG LLNCPIYWQQ 
ENSBTAP00000015955/1-225  LALTVTGLSV SVIFIRQNTS VEKTSMDAQE NRKEATERPV LLTCPMHWKR 
bmy_05530T0/1-177         LALTVIGLSV SAIFLRQNSS TEKSSMDAQE NRKETTERPV LLKCPTNWQL 
ENSTTRP00000014917/1-224  LALTVIGLSV XXXX-XXXXX XXXXXXXXXX XXXXXXXRPV LLKCPTNWQL 


                          101                                                150
ENSP00000229402/1-225     LREKCLLFSH TVNPWNNSLA DCSTKESSLL LIRDKDELIH TQNLIRDKAI 
ENSBTAP00000015955/1-225  IRDKCLYFSE TSKPWNDSLA DCSTRESSLL LIQDQEELRL MQNLINKEGI 
bmy_05530T0/1-177         IRDKCLFFSD TYKPWNDSLA DCFTKESRLL LIQDQEELRL IQNRIDKGGI 
ENSTTRP00000014917/1-224  IGDKCLLFYD TYKPWNDSLA DCFTKESRLL LIQDQEELRL IQNRIDKGSI 


                          151                                                200
ENSP00000229402/1-225     LFWIGLNFSL SEKNWKWING SFLNSNDLEI RGDAKENSCI SISQTSVYSE 
ENSBTAP00000015955/1-225  LFWIGLNFTL SGKSWKWING SFLNSNILPI FGDAKEDCCV YISKTQCISD 
bmy_05530T0/1-177         LFSIGLNFTL SEKNWKWING SFLNTNM--- ---------- ---------- 
ENSTTRP00000014917/1-224  MFWIGLNFTL PEKNWKWING SFLNSNVLQI TGDAKENSCV YITRTKITSE 


                          201                                                250
ENSP00000229402/1-225     YCSTEIRWIC QKELTPVRNK VYPDS 
ENSBTAP00000015955/1-225  YCAAKNRWIC QKELKPVRNK GIYSS 
bmy_05530T0/1-177         ---------- ---------- ----- 
ENSTTRP00000014917/1-224  DCATENKWIC QKELKPVKNK VCSAT